RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 AGLP35573 1532 aa11.43□□□□□ -0.58
SMG1-214ENST00000568038 NUP155O75694 1391 aa11.42□□□□□ -0.58
SMG1-214ENST00000568038 EIF2AK4Q9P2K8 1649 aaKnown RBP11.42□□□□□ -0.58
SMG1-214ENST00000568038 HRCP23327 699 aa11.42□□□□□ -0.58
SMG1-214ENST00000568038 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
SMG1-214ENST00000568038 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.42□□□□□ -0.58
SMG1-214ENST00000568038 ACTN4O43707 911 aaKnown RBP11.41□□□□□ -0.58
SMG1-214ENST00000568038 DDX11L8A8MPP1 907 aa11.4□□□□□ -0.58
SMG1-214ENST00000568038 PHOX2BQ99453 314 aa11.4□□□□□ -0.58
SMG1-214ENST00000568038 DAXXQ9UER7 740 aaPredicted RBP11.4□□□□□ -0.58
SMG1-214ENST00000568038 KANK1Q14678 1352 aa11.4□□□□□ -0.59
SMG1-214ENST00000568038 WASHC2CQ9Y4E1 1318 aa11.39□□□□□ -0.59
SMG1-214ENST00000568038 PRKD2Q9BZL6 878 aa11.39□□□□□ -0.59
SMG1-214ENST00000568038 ESF1Q9H501 851 aaKnown RBP11.39□□□□□ -0.59
SMG1-214ENST00000568038 RNF17Q9BXT8 1623 aaKnown RBP11.38□□□□□ -0.59
SMG1-214ENST00000568038 ACIN1Q9UKV3 1341 aaKnown RBP11.38□□□□□ -0.59
SMG1-214ENST00000568038 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
SMG1-214ENST00000568038 UNC13BO14795 1591 aa11.38□□□□□ -0.59
SMG1-214ENST00000568038 TLL1O43897 1013 aa11.38□□□□□ -0.59
SMG1-214ENST00000568038 GGCXP38435 758 aa11.38□□□□□ -0.59
SMG1-214ENST00000568038 MPHOSPH9Q99550 1183 aa11.38□□□□□ -0.59
SMG1-214ENST00000568038 MROH1Q8NDA8 1641 aa11.38□□□□□ -0.59
SMG1-214ENST00000568038 PUS10Q3MIT2 529 aaKnown RBP11.37□□□□□ -0.59
SMG1-214ENST00000568038 DEPDC5O75140 1603 aa11.37□□□□□ -0.59
SMG1-214ENST00000568038 PRDM15P57071 1507 aaPredicted RBP11.36□□□□□ -0.59
SMG1-214ENST00000568038 PZPP20742 1482 aa11.36□□□□□ -0.59
SMG1-214ENST00000568038 FAM135AQ9P2D6 1515 aa11.35□□□□□ -0.59
SMG1-214ENST00000568038 NR1I2O75469 434 aa11.35□□□□□ -0.59
SMG1-214ENST00000568038 VWDEQ8N2E2 1590 aa11.34□□□□□ -0.59
SMG1-214ENST00000568038 CEP152O94986 1710 aa11.34□□□□□ -0.59
SMG1-214ENST00000568038 IQGAP3Q86VI3 1631 aa11.34□□□□□ -0.59
SMG1-214ENST00000568038 ABCC3O15438 1527 aa11.34□□□□□ -0.59
SMG1-214ENST00000568038 KDM5DQ9BY66 1539 aa11.34□□□□□ -0.59
SMG1-214ENST00000568038 DHX57Q6P158 1386 aaKnown RBP11.33□□□□□ -0.6
SMG1-214ENST00000568038 MAP2K5Q13163 448 aa11.33□□□□□ -0.6
SMG1-214ENST00000568038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMG1-214ENST00000568038 SCUBE3Q8IX30 993 aa11.32□□□□□ -0.6
SMG1-214ENST00000568038 CLTCQ00610 1675 aaKnown RBP11.32□□□□□ -0.6
SMG1-214ENST00000568038 IRF6O14896 467 aa11.31□□□□□ -0.6
SMG1-214ENST00000568038 CEBPAP49715 358 aaPredicted RBP11.31□□□□□ -0.6
SMG1-214ENST00000568038 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
SMG1-214ENST00000568038 CCER1Q8TC90 406 aaPredicted RBP11.31□□□□□ -0.6
SMG1-214ENST00000568038 CNTLNQ9NXG0 1405 aa11.31□□□□□ -0.6
SMG1-214ENST00000568038 TET3O43151 1660 aa11.3□□□□□ -0.6
SMG1-214ENST00000568038 ADAMTSL3P82987 1691 aa11.3□□□□□ -0.6
SMG1-214ENST00000568038 LMTK2Q8IWU2 1503 aa11.3□□□□□ -0.6
SMG1-214ENST00000568038 ZMYM3Q14202 1370 aa11.3□□□□□ -0.6
SMG1-214ENST00000568038 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
SMG1-214ENST00000568038 S1PR4O95977 384 aa11.3□□□□□ -0.6
SMG1-214ENST00000568038 TMUB1Q9BVT8 246 aa11.3□□□□□ -0.6
SMG1-214ENST00000568038 FER1L4A9Z1Z3 1794 aa11.3□□□□□ -0.6
SMG1-214ENST00000568038 MADDQ8WXG6 1647 aa11.3□□□□□ -0.6
SMG1-214ENST00000568038 ZC3H13Q5T200 1668 aaKnown RBP11.3□□□□□ -0.6
SMG1-214ENST00000568038 CAMSAP1Q5T5Y3 1602 aa11.29□□□□□ -0.6
SMG1-214ENST00000568038 RNF223E7ERA6 249 aa11.29□□□□□ -0.6
SMG1-214ENST00000568038 FUT2Q10981 343 aa11.29□□□□□ -0.6
SMG1-214ENST00000568038 FBXO31Q5XUX0 539 aaPredicted RBP11.29□□□□□ -0.6
SMG1-214ENST00000568038 MINK1Q8N4C8 1332 aaPredicted RBP11.29□□□□□ -0.6
SMG1-214ENST00000568038 CFAP65Q6ZU64 1925 aaKnown RBP11.29□□□□□ -0.6
SMG1-214ENST00000568038 NPATQ14207 1427 aa11.28□□□□□ -0.6
SMG1-214ENST00000568038 RIMS1Q86UR5 1692 aaKnown RBP11.28□□□□□ -0.6
SMG1-214ENST00000568038 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
SMG1-214ENST00000568038 LMOD2Q6P5Q4 547 aa11.28□□□□□ -0.6
SMG1-214ENST00000568038 V9GY48 417 aaPredicted RBP11.28□□□□□ -0.6
SMG1-214ENST00000568038 EFCAB6Q5THR3 1501 aa11.28□□□□□ -0.6
SMG1-214ENST00000568038 E9PCH4 1651 aa11.27□□□□□ -0.6
SMG1-214ENST00000568038 GFRA3O60609 400 aa11.27□□□□□ -0.61
SMG1-214ENST00000568038 ADH1BP00325 375 aa11.27□□□□□ -0.61
SMG1-214ENST00000568038 GCGRP47871 477 aa11.27□□□□□ -0.61
SMG1-214ENST00000568038 Q6ZNB5 142 aa11.27□□□□□ -0.61
SMG1-214ENST00000568038 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
SMG1-214ENST00000568038 ARHGAP31Q2M1Z3 1444 aa11.26□□□□□ -0.61
SMG1-214ENST00000568038 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
SMG1-214ENST00000568038 SLC6A16Q9GZN6 736 aa11.26□□□□□ -0.61
SMG1-214ENST00000568038 RPRD2Q5VT52 1461 aaKnown RBP11.25□□□□□ -0.61
SMG1-214ENST00000568038 MROH2AA6NES4 1674 aa11.25□□□□□ -0.61
SMG1-214ENST00000568038 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
SMG1-214ENST00000568038 SPSB2Q99619 263 aa11.25□□□□□ -0.61
SMG1-214ENST00000568038 ANKRD30BQ9BXX2 1392 aa11.25□□□□□ -0.61
SMG1-214ENST00000568038 MORN1Q5T089 497 aa11.24□□□□□ -0.61
SMG1-214ENST00000568038 SIN3AQ96ST3 1273 aa11.24□□□□□ -0.61
SMG1-214ENST00000568038 PTPRMP28827 1452 aa11.24□□□□□ -0.61
SMG1-214ENST00000568038 ERVK-7P63135 1459 aa11.24□□□□□ -0.61
SMG1-214ENST00000568038 C3P01024 1663 aa11.24□□□□□ -0.61
SMG1-214ENST00000568038 SLC19A1P41440 591 aa11.23□□□□□ -0.61
SMG1-214ENST00000568038 NEUROD1Q13562 356 aa11.23□□□□□ -0.61
SMG1-214ENST00000568038 NOS1P29475 1434 aa11.23□□□□□ -0.61
SMG1-214ENST00000568038 PLA2R1Q13018 1463 aa11.23□□□□□ -0.61
SMG1-214ENST00000568038 PTPRTO14522 1441 aa11.22□□□□□ -0.61
SMG1-214ENST00000568038 PREX1Q8TCU6 1659 aa11.22□□□□□ -0.61
SMG1-214ENST00000568038 TNRQ92752 1358 aa11.22□□□□□ -0.61
SMG1-214ENST00000568038 SLC27A5Q9Y2P5 690 aa11.22□□□□□ -0.61
SMG1-214ENST00000568038 SPHKAPQ2M3C7 1700 aa11.21□□□□□ -0.61
SMG1-214ENST00000568038 ANKLE1Q8NAG6 615 aa11.21□□□□□ -0.61
SMG1-214ENST00000568038 SPATA31D1Q6ZQQ2 1576 aa11.2□□□□□ -0.62
SMG1-214ENST00000568038 CCDC144AA2RUR9 1427 aa11.2□□□□□ -0.62
SMG1-214ENST00000568038 CD46P15529 392 aa11.2□□□□□ -0.62
SMG1-214ENST00000568038 IDI1Q13907 227 aa11.2□□□□□ -0.62
SMG1-214ENST00000568038 SYNMO15061 1565 aa11.2□□□□□ -0.62
SMG1-214ENST00000568038 UGGT1Q9NYU2 1555 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms