RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 EFCAB2Q5VUJ9 269 aa8.33□□□□□ -1.08
SF3B3-210ENST00000567654 CYB5RLQ6IPT4 315 aa8.33□□□□□ -1.08
SF3B3-210ENST00000567654 E9PCH4 1651 aa8.33□□□□□ -1.08
SF3B3-210ENST00000567654 MROH1Q8NDA8 1641 aa8.32□□□□□ -1.08
SF3B3-210ENST00000567654 FRMPD1Q5SYB0 1578 aa8.32□□□□□ -1.08
SF3B3-210ENST00000567654 SLC4A3P48751 1232 aa8.32□□□□□ -1.08
SF3B3-210ENST00000567654 HLA-CQ95604 372 aa8.32□□□□□ -1.08
SF3B3-210ENST00000567654 CFAP65Q6ZU64 1925 aaKnown RBP8.32□□□□□ -1.08
SF3B3-210ENST00000567654 FAM135AQ9P2D6 1515 aa8.32□□□□□ -1.08
SF3B3-210ENST00000567654 EIF2AK4Q9P2K8 1649 aaKnown RBP8.32□□□□□ -1.08
SF3B3-210ENST00000567654 HECW2Q9P2P5 1572 aa8.31□□□□□ -1.08
SF3B3-210ENST00000567654 CD109Q6YHK3 1445 aa8.31□□□□□ -1.08
SF3B3-210ENST00000567654 SCAPERQ9BY12 1400 aa8.31□□□□□ -1.08
SF3B3-210ENST00000567654 TSPY4P0CV99 314 aa8.31□□□□□ -1.08
SF3B3-210ENST00000567654 TSPY10P0CW01 314 aa8.31□□□□□ -1.08
SF3B3-210ENST00000567654 GCGRP47871 477 aa8.31□□□□□ -1.08
SF3B3-210ENST00000567654 ANKRD30BQ9BXX2 1392 aa8.31□□□□□ -1.08
SF3B3-210ENST00000567654 SPHKAPQ2M3C7 1700 aa8.31□□□□□ -1.08
SF3B3-210ENST00000567654 TEX14Q8IWB6 1497 aa8.31□□□□□ -1.08
SF3B3-210ENST00000567654 GUCA2AQ02747 115 aa8.3□□□□□ -1.08
SF3B3-210ENST00000567654 FUT2Q10981 343 aa8.3□□□□□ -1.08
SF3B3-210ENST00000567654 PUS10Q3MIT2 529 aaKnown RBP8.3□□□□□ -1.08
SF3B3-210ENST00000567654 AFAP1Q8N556 730 aa8.3□□□□□ -1.08
SF3B3-210ENST00000567654 SPIRE2Q8WWL2 714 aa8.3□□□□□ -1.08
SF3B3-210ENST00000567654 RPRD2Q5VT52 1461 aaKnown RBP8.3□□□□□ -1.08
SF3B3-210ENST00000567654 ERBINQ96RT1 1412 aa8.29□□□□□ -1.08
SF3B3-210ENST00000567654 BCORL1Q5H9F3 1711 aa8.29□□□□□ -1.08
SF3B3-210ENST00000567654 RSPH4AQ5TD94 716 aa8.29□□□□□ -1.08
SF3B3-210ENST00000567654 TET3O43151 1660 aa8.29□□□□□ -1.08
SF3B3-210ENST00000567654 RNF17Q9BXT8 1623 aaKnown RBP8.29□□□□□ -1.08
SF3B3-210ENST00000567654 RTEL1-TNFRSF6BF6WH68 1400 aa8.29□□□□□ -1.08
SF3B3-210ENST00000567654 POGZQ7Z3K3 1410 aa8.29□□□□□ -1.08
SF3B3-210ENST00000567654 DIP2CQ9Y2E4 1556 aa8.28□□□□□ -1.08
SF3B3-210ENST00000567654 NUP155O75694 1391 aa8.28□□□□□ -1.08
SF3B3-210ENST00000567654 KDM4AO75164 1064 aa8.28□□□□□ -1.08
SF3B3-210ENST00000567654 NDUFV2P19404 249 aa8.28□□□□□ -1.08
SF3B3-210ENST00000567654 NUTM1Q86Y26 1132 aa8.28□□□□□ -1.08
SF3B3-210ENST00000567654 TBC1D2Q9BYX2 928 aa8.28□□□□□ -1.08
SF3B3-210ENST00000567654 SIGLEC1Q9BZZ2 1709 aa8.28□□□□□ -1.08
SF3B3-210ENST00000567654 VWDEQ8N2E2 1590 aa8.27□□□□□ -1.09
SF3B3-210ENST00000567654 ZNF518AQ6AHZ1 1483 aa8.27□□□□□ -1.09
SF3B3-210ENST00000567654 NEO1Q92859 1461 aa8.27□□□□□ -1.09
SF3B3-210ENST00000567654 TONSLQ96HA7 1378 aa8.27□□□□□ -1.09
SF3B3-210ENST00000567654 POLR1AO95602 1720 aaPredicted RBP8.27□□□□□ -1.09
SF3B3-210ENST00000567654 MOXD2PA6NHM9 499 aa8.27□□□□□ -1.09
SF3B3-210ENST00000567654 KMT5BQ4FZB7 885 aa8.27□□□□□ -1.09
SF3B3-210ENST00000567654 DDRGK1Q96HY6 314 aa8.27□□□□□ -1.09
SF3B3-210ENST00000567654 PRDM15P57071 1507 aaPredicted RBP8.27□□□□□ -1.09
SF3B3-210ENST00000567654 SPAG9O60271 1321 aaKnown RBP8.27□□□□□ -1.09
SF3B3-210ENST00000567654 PPP1R15AO75807 674 aaPredicted RBP8.26□□□□□ -1.09
SF3B3-210ENST00000567654 COPS2P61201 443 aa8.26□□□□□ -1.09
SF3B3-210ENST00000567654 POLR3EQ9NVU0 708 aa8.26□□□□□ -1.09
SF3B3-210ENST00000567654 HOXA2O43364 376 aa8.25□□□□□ -1.09
SF3B3-210ENST00000567654 ACTN4O43707 911 aaKnown RBP8.25□□□□□ -1.09
SF3B3-210ENST00000567654 MYSM1Q5VVJ2 828 aa8.25□□□□□ -1.09
SF3B3-210ENST00000567654 BLOC1S3Q6QNY0 202 aa8.25□□□□□ -1.09
SF3B3-210ENST00000567654 PCDHB3Q9Y5E6 796 aa8.25□□□□□ -1.09
SF3B3-210ENST00000567654 PLA2R1Q13018 1463 aa8.25□□□□□ -1.09
SF3B3-210ENST00000567654 CLTCL1P53675 1640 aa8.25□□□□□ -1.09
SF3B3-210ENST00000567654 MROH2AA6NES4 1674 aa8.24□□□□□ -1.09
SF3B3-210ENST00000567654 CSPP1Q1MSJ5 1256 aa8.24□□□□□ -1.09
SF3B3-210ENST00000567654 HCSTQ9UBK5 93 aa8.24□□□□□ -1.09
SF3B3-210ENST00000567654 LIMD1Q9UGP4 676 aa8.24□□□□□ -1.09
SF3B3-210ENST00000567654 TIMELESSQ9UNS1 1208 aa8.24□□□□□ -1.09
SF3B3-210ENST00000567654 MLH3Q9UHC1 1453 aa8.24□□□□□ -1.09
SF3B3-210ENST00000567654 ZMYM4Q5VZL5 1548 aa8.24□□□□□ -1.09
SF3B3-210ENST00000567654 IFT172Q9UG01 1749 aa8.23□□□□□ -1.09
SF3B3-210ENST00000567654 CAMSAP1Q5T5Y3 1602 aa8.23□□□□□ -1.09
SF3B3-210ENST00000567654 PROCA1Q8NCQ7 364 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-210ENST00000567654 NECTIN2Q92692 538 aa8.23□□□□□ -1.09
SF3B3-210ENST00000567654 KIF1BO60333 1816 aa8.23□□□□□ -1.09
SF3B3-210ENST00000567654 A2MP01023 1474 aa8.23□□□□□ -1.09
SF3B3-210ENST00000567654 ACIN1Q9UKV3 1341 aaKnown RBP8.23□□□□□ -1.09
SF3B3-210ENST00000567654 MYO5BQ9ULV0 1848 aa8.22□□□□□ -1.09
SF3B3-210ENST00000567654 ATP10AO60312 1499 aa8.22□□□□□ -1.09
SF3B3-210ENST00000567654 ATP6V1AP38606 617 aa8.22□□□□□ -1.09
SF3B3-210ENST00000567654 MORN1Q5T089 497 aa8.22□□□□□ -1.09
SF3B3-210ENST00000567654 ZNF516Q92618 1163 aa8.22□□□□□ -1.09
SF3B3-210ENST00000567654 L3MBTL2Q969R5 705 aa8.22□□□□□ -1.09
SF3B3-210ENST00000567654 MTRQ99707 1265 aa8.22□□□□□ -1.09
SF3B3-210ENST00000567654 PCDHGC3Q9UN70 934 aa8.22□□□□□ -1.09
SF3B3-210ENST00000567654 EFCAB6Q5THR3 1501 aa8.22□□□□□ -1.09
SF3B3-210ENST00000567654 TRPM1Q7Z4N2 1603 aa8.21□□□□□ -1.09
SF3B3-210ENST00000567654 TLL1O43897 1013 aa8.21□□□□□ -1.1
SF3B3-210ENST00000567654 DIEXFQ68CQ4 756 aaKnown RBP8.21□□□□□ -1.1
SF3B3-210ENST00000567654 RIC3Q7Z5B4 369 aa8.21□□□□□ -1.1
SF3B3-210ENST00000567654 SYMPKQ92797 1274 aaKnown RBP8.21□□□□□ -1.1
SF3B3-210ENST00000567654 SLC27A5Q9Y2P5 690 aa8.21□□□□□ -1.1
SF3B3-210ENST00000567654 PCDHB15Q9Y5E8 787 aa8.21□□□□□ -1.1
SF3B3-210ENST00000567654 DHX29Q7Z478 1369 aaKnown RBP8.21□□□□□ -1.1
SF3B3-210ENST00000567654 YEATS2Q9ULM3 1422 aa8.2□□□□□ -1.1
SF3B3-210ENST00000567654 TRPM2O94759 1503 aa8.2□□□□□ -1.1
SF3B3-210ENST00000567654 UGGT1Q9NYU2 1555 aa8.2□□□□□ -1.1
SF3B3-210ENST00000567654 RAPGEF3O95398 923 aa8.2□□□□□ -1.1
SF3B3-210ENST00000567654 FDX1P10109 184 aa8.2□□□□□ -1.1
SF3B3-210ENST00000567654 FAM69CQ0P6D2 419 aa8.2□□□□□ -1.1
SF3B3-210ENST00000567654 NBPF8Q3BBV2 869 aa8.2□□□□□ -1.1
SF3B3-210ENST00000567654 FBXO31Q5XUX0 539 aaPredicted RBP8.2□□□□□ -1.1
SF3B3-210ENST00000567654 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
SF3B3-210ENST00000567654 PRR14Q9BWN1 585 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms