RNA–Protein interactions for RNA: ENST00000567375.1

NSMCE1-212, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-212ENST00000567375 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
NSMCE1-212ENST00000567375 PHRF1Q9P1Y6 1649 aaKnown RBP12.37□□□□□ -0.43
NSMCE1-212ENST00000567375 ADGRF5Q8IZF2 1346 aa12.37□□□□□ -0.43
NSMCE1-212ENST00000567375 C1QTNF8P60827 252 aa12.36□□□□□ -0.43
NSMCE1-212ENST00000567375 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
NSMCE1-212ENST00000567375 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
NSMCE1-212ENST00000567375 SLC39A7Q92504 469 aa12.35□□□□□ -0.43
NSMCE1-212ENST00000567375 SIRT1Q96EB6 747 aa12.35□□□□□ -0.43
NSMCE1-212ENST00000567375 PARP4Q9UKK3 1724 aaKnown RBP12.34□□□□□ -0.43
NSMCE1-212ENST00000567375 ANKRD30BQ9BXX2 1392 aa12.34□□□□□ -0.43
NSMCE1-212ENST00000567375 C7P10643 843 aa12.34□□□□□ -0.43
NSMCE1-212ENST00000567375 SBF2Q86WG5 1849 aa12.33□□□□□ -0.44
NSMCE1-212ENST00000567375 SPATA31E1Q6ZUB1 1445 aa12.33□□□□□ -0.44
NSMCE1-212ENST00000567375 PEAK1Q9H792 1746 aa12.33□□□□□ -0.44
NSMCE1-212ENST00000567375 ITGAEP38570 1179 aa12.32□□□□□ -0.44
NSMCE1-212ENST00000567375 TMEM132EQ6IEE7 984 aa12.32□□□□□ -0.44
NSMCE1-212ENST00000567375 PRDM11Q9NQV5 511 aa12.32□□□□□ -0.44
NSMCE1-212ENST00000567375 GPRASP1Q5JY77 1395 aa12.31□□□□□ -0.44
NSMCE1-212ENST00000567375 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
NSMCE1-212ENST00000567375 DLC1Q96QB1 1528 aa12.31□□□□□ -0.44
NSMCE1-212ENST00000567375 CEP350Q5VT06 3117 aa12.3□□□□□ -0.44
NSMCE1-212ENST00000567375 LMO7Q8WWI1 1683 aa12.3□□□□□ -0.44
NSMCE1-212ENST00000567375 PMFBP1Q8TBY8 1022 aa12.3□□□□□ -0.44
NSMCE1-212ENST00000567375 TULP4Q9NRJ4 1543 aa12.3□□□□□ -0.44
NSMCE1-212ENST00000567375 ACIN1Q9UKV3 1341 aaKnown RBP12.3□□□□□ -0.44
NSMCE1-212ENST00000567375 KIAA0232Q92628 1395 aa12.3□□□□□ -0.44
NSMCE1-212ENST00000567375 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
NSMCE1-212ENST00000567375 ITSN1Q15811 1721 aa12.29□□□□□ -0.44
NSMCE1-212ENST00000567375 TIE1P35590 1138 aa12.29□□□□□ -0.44
NSMCE1-212ENST00000567375 PDE3BQ13370 1112 aa12.29□□□□□ -0.44
NSMCE1-212ENST00000567375 ANO8Q9HCE9 1232 aaPredicted RBP12.28□□□□□ -0.44
NSMCE1-212ENST00000567375 EIF3AQ14152 1382 aaKnown RBP12.28□□□□□ -0.44
NSMCE1-212ENST00000567375 ATP7BP35670 1465 aa12.27□□□□□ -0.44
NSMCE1-212ENST00000567375 LRRC37A3O60309 1634 aa12.27□□□□□ -0.44
NSMCE1-212ENST00000567375 OVOS2A0A0G2JMS6 1433 aa12.27□□□□□ -0.45
NSMCE1-212ENST00000567375 OVOS2A0A0J9YW53 1432 aa12.27□□□□□ -0.45
NSMCE1-212ENST00000567375 OVOS2Q6IE36 1432 aa12.27□□□□□ -0.45
NSMCE1-212ENST00000567375 WNK3Q9BYP7 1800 aa12.26□□□□□ -0.45
NSMCE1-212ENST00000567375 C11orf95C9JLR9 678 aaPredicted RBP12.26□□□□□ -0.45
NSMCE1-212ENST00000567375 PTGER2P43116 358 aa12.26□□□□□ -0.45
NSMCE1-212ENST00000567375 STRN4Q9NRL3 753 aa12.26□□□□□ -0.45
NSMCE1-212ENST00000567375 DHX57Q6P158 1386 aaKnown RBP12.26□□□□□ -0.45
NSMCE1-212ENST00000567375 TTLL13PA6NNM8 815 aa12.25□□□□□ -0.45
NSMCE1-212ENST00000567375 PRAM1Q96QH2 718 aa12.25□□□□□ -0.45
NSMCE1-212ENST00000567375 USP35Q9P2H5 1018 aa12.25□□□□□ -0.45
NSMCE1-212ENST00000567375 PLSCR1O15162 318 aa12.24□□□□□ -0.45
NSMCE1-212ENST00000567375 CHRNA2Q15822 529 aa12.24□□□□□ -0.45
NSMCE1-212ENST00000567375 TCP11L2Q8N4U5 519 aa12.24□□□□□ -0.45
NSMCE1-212ENST00000567375 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
NSMCE1-212ENST00000567375 SYT17Q9BSW7 474 aa12.24□□□□□ -0.45
NSMCE1-212ENST00000567375 PDGFDQ9GZP0 370 aaPredicted RBP12.24□□□□□ -0.45
NSMCE1-212ENST00000567375 PRR36Q9H6K5 1346 aa12.24□□□□□ -0.45
NSMCE1-212ENST00000567375 C14orf93Q9H972 538 aaKnown RBP12.24□□□□□ -0.45
NSMCE1-212ENST00000567375 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
NSMCE1-212ENST00000567375 AKAP12Q02952 1782 aa12.23□□□□□ -0.45
NSMCE1-212ENST00000567375 SHANK3Q9BYB0 1731 aa12.23□□□□□ -0.45
NSMCE1-212ENST00000567375 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
NSMCE1-212ENST00000567375 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-212ENST00000567375 ZBTB7AO95365 584 aa12.23□□□□□ -0.45
NSMCE1-212ENST00000567375 SAFB2Q14151 953 aaKnown RBP eCLIP12.23□□□□□ -0.45
NSMCE1-212ENST00000567375 FHDC1Q9C0D6 1143 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-212ENST00000567375 ADGRB1O14514 1584 aa12.22□□□□□ -0.45
NSMCE1-212ENST00000567375 RGL3Q3MIN7 710 aa12.22□□□□□ -0.45
NSMCE1-212ENST00000567375 THRAP3Q9Y2W1 955 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-212ENST00000567375 CPDO75976 1380 aa12.21□□□□□ -0.45
NSMCE1-212ENST00000567375 LARP1Q6PKG0 1096 aaKnown RBP12.21□□□□□ -0.45
NSMCE1-212ENST00000567375 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
NSMCE1-212ENST00000567375 TOPAZ1Q8N9V7 1692 aa12.21□□□□□ -0.45
NSMCE1-212ENST00000567375 EVA1CP58658 441 aa12.2□□□□□ -0.46
NSMCE1-212ENST00000567375 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
NSMCE1-212ENST00000567375 PCDHB13Q9Y5F0 798 aa12.2□□□□□ -0.46
NSMCE1-212ENST00000567375 COL5A2P05997 1499 aaPredicted RBP12.2□□□□□ -0.46
NSMCE1-212ENST00000567375 ZC3H6P61129 1189 aaKnown RBP12.19□□□□□ -0.46
NSMCE1-212ENST00000567375 NGDNQ8NEJ9 315 aaKnown RBP12.19□□□□□ -0.46
NSMCE1-212ENST00000567375 BCL11BQ9C0K0 894 aaPredicted RBP12.19□□□□□ -0.46
NSMCE1-212ENST00000567375 MTFR1LQ9H019 292 aa12.19□□□□□ -0.46
NSMCE1-212ENST00000567375 POGKQ9P215 609 aa12.19□□□□□ -0.46
NSMCE1-212ENST00000567375 BCL9O00512 1426 aa12.19□□□□□ -0.46
NSMCE1-212ENST00000567375 PAPPAQ13219 1627 aa12.19□□□□□ -0.46
NSMCE1-212ENST00000567375 CFAP70Q5T0N1 1121 aa12.18□□□□□ -0.46
NSMCE1-212ENST00000567375 CRB1P82279 1406 aa12.18□□□□□ -0.46
NSMCE1-212ENST00000567375 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
NSMCE1-212ENST00000567375 HIRIP3Q9BW71 556 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-212ENST00000567375 COL24A1Q17RW2 1714 aa12.17□□□□□ -0.46
NSMCE1-212ENST00000567375 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-212ENST00000567375 LCE2DQ5TA82 110 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-212ENST00000567375 FAM212AQ96EL1 285 aa12.16□□□□□ -0.46
NSMCE1-212ENST00000567375 STK32BQ9NY57 414 aa12.16□□□□□ -0.46
NSMCE1-212ENST00000567375 ARHGEF28Q8N1W1 1705 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-212ENST00000567375 GOLGB1Q14789 3259 aaKnown RBP12.16□□□□□ -0.46
NSMCE1-212ENST00000567375 USP19O94966 1318 aa12.15□□□□□ -0.46
NSMCE1-212ENST00000567375 MINK1Q8N4C8 1332 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-212ENST00000567375 SLC15A2Q16348 729 aa12.15□□□□□ -0.46
NSMCE1-212ENST00000567375 PTF1AQ7RTS3 328 aa12.15□□□□□ -0.46
NSMCE1-212ENST00000567375 TRIM35Q9UPQ4 493 aa12.15□□□□□ -0.46
NSMCE1-212ENST00000567375 POLR3AO14802 1390 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-212ENST00000567375 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
NSMCE1-212ENST00000567375 NHSQ6T4R5 1651 aa12.14□□□□□ -0.47
NSMCE1-212ENST00000567375 ARXQ96QS3 562 aa12.14□□□□□ -0.47
NSMCE1-212ENST00000567375 NUTM2GQ5VZR2 741 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms