RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CDK11AQ9UQ88 783 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 TLL2Q9Y6L7 1015 aa5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 PPP1R15AO75807 674 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-211ENST00000566550 CLCN1P35523 988 aa5.26□□□□□ -1.57
HERPUD1-211ENST00000566550 KCNH2Q12809 1159 aa5.26□□□□□ -1.57
HERPUD1-211ENST00000566550 C6orf118Q5T5N4 469 aa5.26□□□□□ -1.57
HERPUD1-211ENST00000566550 ZNF511Q8NB15 262 aa5.26□□□□□ -1.57
HERPUD1-211ENST00000566550 BEGAINQ9BUH8 593 aa5.26□□□□□ -1.57
HERPUD1-211ENST00000566550 GDPD2Q9HCC8 539 aa5.26□□□□□ -1.57
HERPUD1-211ENST00000566550 ZIC2O95409 532 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 FDX1P10109 184 aa5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 BMP2P12643 396 aa5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 SSTR3P32745 418 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 ABL2P42684 1182 aa5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 GSK3AP49840 483 aa5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 MARSP56192 900 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 GUCA2AQ02747 115 aa5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 PDE4CQ08493 712 aa5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 GPAT2Q6NUI2 795 aa5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 WWC1Q8IX03 1113 aa5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 GPCPD1Q9NPB8 672 aa5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 DNMT3AQ9Y6K1 912 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-211ENST00000566550 POM121CA8CG34 1229 aa5.24□□□□□ -1.57
HERPUD1-211ENST00000566550 PATL2C9JE40 543 aaKnown RBP5.24□□□□□ -1.57
HERPUD1-211ENST00000566550 SPTLC1O15269 473 aa5.24□□□□□ -1.57
HERPUD1-211ENST00000566550 RFX1P22670 979 aa5.24□□□□□ -1.57
HERPUD1-211ENST00000566550 NR5A1Q13285 461 aa5.24□□□□□ -1.57
HERPUD1-211ENST00000566550 ARID5BQ14865 1188 aa5.24□□□□□ -1.57
HERPUD1-211ENST00000566550 KANK3Q6NY19 840 aa5.24□□□□□ -1.57
HERPUD1-211ENST00000566550 SVOPQ8N4V2 548 aa5.24□□□□□ -1.57
HERPUD1-211ENST00000566550 GLMNQ92990 594 aa5.24□□□□□ -1.57
HERPUD1-211ENST00000566550 CNTNAP3BQ96NU0 1288 aa5.24□□□□□ -1.57
HERPUD1-211ENST00000566550 CNTNAP3Q9BZ76 1288 aa5.24□□□□□ -1.57
HERPUD1-211ENST00000566550 CARNS1A5YM72 827 aa5.23□□□□□ -1.57
HERPUD1-211ENST00000566550 HMGB1P09429 215 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-211ENST00000566550 HSP90B1P14625 803 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-211ENST00000566550 RFC5P40937 340 aa5.23□□□□□ -1.57
HERPUD1-211ENST00000566550 KCNA1Q09470 495 aa5.23□□□□□ -1.57
HERPUD1-211ENST00000566550 CCDC27Q2M243 656 aa5.23□□□□□ -1.57
HERPUD1-211ENST00000566550 SCARF2Q96GP6 870 aaPredicted RBP5.23□□□□□ -1.57
HERPUD1-211ENST00000566550 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.22□□□□□ -1.57
HERPUD1-211ENST00000566550 CSB-PGBD3P0DP91 1061 aa5.22□□□□□ -1.57
HERPUD1-211ENST00000566550 IRS1P35568 1242 aa5.22□□□□□ -1.57
HERPUD1-211ENST00000566550 CLK2P49760 499 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-211ENST00000566550 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.22□□□□□ -1.57
HERPUD1-211ENST00000566550 MYSM1Q5VVJ2 828 aa5.22□□□□□ -1.57
HERPUD1-211ENST00000566550 DESI1Q6ICB0 168 aa5.22□□□□□ -1.57
HERPUD1-211ENST00000566550 KLF16Q9BXK1 252 aaPredicted RBP5.22□□□□□ -1.57
HERPUD1-211ENST00000566550 IVNS1ABPQ9Y6Y0 642 aa5.22□□□□□ -1.57
HERPUD1-211ENST00000566550 BRD1O95696 1058 aa5.21□□□□□ -1.58
HERPUD1-211ENST00000566550 CTHP32929 405 aa5.21□□□□□ -1.58
HERPUD1-211ENST00000566550 AGERQ15109 404 aa5.21□□□□□ -1.58
HERPUD1-211ENST00000566550 LINC00528Q8N1L1 170 aa5.21□□□□□ -1.58
HERPUD1-211ENST00000566550 CDK15Q96Q40 435 aa5.21□□□□□ -1.58
HERPUD1-211ENST00000566550 TSEN34Q9BSV6 310 aaKnown RBP5.21□□□□□ -1.58
HERPUD1-211ENST00000566550 MTMR14Q8NCE2 650 aa5.2□□□□□ -1.58
HERPUD1-211ENST00000566550 BANK1Q8NDB2 785 aa5.2□□□□□ -1.58
HERPUD1-211ENST00000566550 PRR7Q8TB68 274 aa5.2□□□□□ -1.58
HERPUD1-211ENST00000566550 PBXIP1Q96AQ6 731 aa5.2□□□□□ -1.58
HERPUD1-211ENST00000566550 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.2□□□□□ -1.58
HERPUD1-211ENST00000566550 COL25A1Q9BXS0 654 aaPredicted RBP5.2□□□□□ -1.58
HERPUD1-211ENST00000566550 ZFAND3Q9H8U3 227 aa5.2□□□□□ -1.58
HERPUD1-211ENST00000566550 FAM217BQ9NTX9 383 aaPredicted RBP5.2□□□□□ -1.58
HERPUD1-211ENST00000566550 SOS2Q07890 1332 aaPredicted RBP5.2□□□□□ -1.58
HERPUD1-211ENST00000566550 MTMR2Q13614 643 aa5.19□□□□□ -1.58
HERPUD1-211ENST00000566550 BPHLQ86WA6 291 aaPredicted RBP5.19□□□□□ -1.58
HERPUD1-211ENST00000566550 ITPKCQ96DU7 683 aa5.19□□□□□ -1.58
HERPUD1-211ENST00000566550 TBC1D2BQ9UPU7 963 aa5.19□□□□□ -1.58
HERPUD1-211ENST00000566550 USTQ9Y2C2 406 aa5.19□□□□□ -1.58
HERPUD1-211ENST00000566550 MAP3K10Q02779 954 aa5.18□□□□□ -1.58
HERPUD1-211ENST00000566550 CSPP1Q1MSJ5 1256 aa5.18□□□□□ -1.58
HERPUD1-211ENST00000566550 FBXO31Q5XUX0 539 aaPredicted RBP5.18□□□□□ -1.58
HERPUD1-211ENST00000566550 ZNF385CQ66K41 422 aaPredicted RBP5.18□□□□□ -1.58
HERPUD1-211ENST00000566550 MEIOBQ8N635 442 aa5.18□□□□□ -1.58
HERPUD1-211ENST00000566550 NANOS1Q8WY41 292 aaKnown RBP5.18□□□□□ -1.58
HERPUD1-211ENST00000566550 PCDHGC3Q9UN70 934 aa5.18□□□□□ -1.58
HERPUD1-211ENST00000566550 TTLL8A6PVC2 850 aa5.17□□□□□ -1.58
HERPUD1-211ENST00000566550 KRT76Q01546 638 aa5.17□□□□□ -1.58
HERPUD1-211ENST00000566550 PTSQ03393 145 aa5.17□□□□□ -1.58
HERPUD1-211ENST00000566550 TMEM259Q4ZIN3 620 aa5.17□□□□□ -1.58
HERPUD1-211ENST00000566550 SND1Q7KZF4 910 aaKnown RBP eCLIP5.17□□□□□ -1.58
HERPUD1-211ENST00000566550 SV2AQ7L0J3 742 aa5.17□□□□□ -1.58
HERPUD1-211ENST00000566550 GPR161Q8N6U8 529 aaKnown RBP5.17□□□□□ -1.58
HERPUD1-211ENST00000566550 TBC1D2Q9BYX2 928 aa5.17□□□□□ -1.58
HERPUD1-211ENST00000566550 PRM3Q9NNZ6 103 aa5.17□□□□□ -1.58
HERPUD1-211ENST00000566550 ENAMQ9NRM1 1142 aa5.17□□□□□ -1.58
HERPUD1-211ENST00000566550 DNMT3LQ9UJW3 386 aa5.17□□□□□ -1.58
HERPUD1-211ENST00000566550 SLURP2P0DP57 97 aa5.16□□□□□ -1.58
HERPUD1-211ENST00000566550 ARMC2Q8NEN0 867 aa5.16□□□□□ -1.58
HERPUD1-211ENST00000566550 PUS7Q96PZ0 661 aaKnown RBP5.16□□□□□ -1.58
HERPUD1-211ENST00000566550 LIMD1Q9UGP4 676 aa5.16□□□□□ -1.58
HERPUD1-211ENST00000566550 AMOTL2Q9Y2J4 779 aa5.16□□□□□ -1.58
HERPUD1-211ENST00000566550 EMILIN1Q9Y6C2 1016 aa5.16□□□□□ -1.58
HERPUD1-211ENST00000566550 PHF20L1A8MW92 1017 aa5.15□□□□□ -1.59
HERPUD1-211ENST00000566550 MSTNO14793 375 aa5.15□□□□□ -1.59
HERPUD1-211ENST00000566550 NR3C2P08235 984 aa5.15□□□□□ -1.59
HERPUD1-211ENST00000566550 DIXDC1Q155Q3 683 aa5.15□□□□□ -1.59
HERPUD1-211ENST00000566550 XP32Q5T750 250 aa5.15□□□□□ -1.59
HERPUD1-211ENST00000566550 HDGFL1Q5TGJ6 251 aa5.15□□□□□ -1.59
HERPUD1-211ENST00000566550 LYPD8Q6UX82 237 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms