RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 TWISTNBQ3B726 338 aaPredicted RBP17.8■□□□□ 0.44
CDH1-209ENST00000566510 BMP2KLQ5H9B9 411 aa17.8■□□□□ 0.44
CDH1-209ENST00000566510 GCC1Q96CN9 775 aa17.8■□□□□ 0.44
CDH1-209ENST00000566510 XRCC6P12956 609 aaKnown RBP eCLIP17.8■□□□□ 0.44
CDH1-209ENST00000566510 RRS1Q15050 365 aaKnown RBP17.8■□□□□ 0.44
CDH1-209ENST00000566510 FAM83GA6ND36 823 aa17.79■□□□□ 0.44
CDH1-209ENST00000566510 MLECQ14165 292 aa17.79■□□□□ 0.44
CDH1-209ENST00000566510 IFT57Q9NWB7 429 aa17.79■□□□□ 0.44
CDH1-209ENST00000566510 DCTN1Q14203 1278 aa17.78■□□□□ 0.44
CDH1-209ENST00000566510 C8orf58Q8NAV2 365 aa17.78■□□□□ 0.44
CDH1-209ENST00000566510 PANK2Q9BZ23 570 aa17.78■□□□□ 0.44
CDH1-209ENST00000566510 IL13P35225 146 aa17.77■□□□□ 0.44
CDH1-209ENST00000566510 ARHGAP45Q92619 1136 aa17.77■□□□□ 0.44
CDH1-209ENST00000566510 NCKAP5LQ9HCH0 1330 aa17.77■□□□□ 0.44
CDH1-209ENST00000566510 BRPF1P55201 1214 aaPredicted RBP17.77■□□□□ 0.44
CDH1-209ENST00000566510 TBC1D9Q6ZT07 1266 aa17.77■□□□□ 0.44
CDH1-209ENST00000566510 DDX11L8A8MPP1 907 aa17.76■□□□□ 0.43
CDH1-209ENST00000566510 SIRT2Q8IXJ6 389 aa17.76■□□□□ 0.43
CDH1-209ENST00000566510 COG3Q96JB2 828 aa17.76■□□□□ 0.43
CDH1-209ENST00000566510 TXNDC2Q86VQ3 553 aa17.75■□□□□ 0.43
CDH1-209ENST00000566510 SNX21Q969T3 373 aa17.75■□□□□ 0.43
CDH1-209ENST00000566510 ZNF692Q9BU19 519 aaPredicted RBP17.75■□□□□ 0.43
CDH1-209ENST00000566510 TNPO1Q92973 898 aaKnown RBP17.75■□□□□ 0.43
CDH1-209ENST00000566510 RBM42Q9BTD8 480 aaKnown RBP17.75■□□□□ 0.43
CDH1-209ENST00000566510 RRAGDQ9NQL2 400 aaPredicted RBP17.75■□□□□ 0.43
CDH1-209ENST00000566510 CFAP44Q96MT7 982 aa17.74■□□□□ 0.43
CDH1-209ENST00000566510 FSD2A1L4K1 749 aa17.74■□□□□ 0.43
CDH1-209ENST00000566510 WASLO00401 505 aaPredicted RBP17.74■□□□□ 0.43
CDH1-209ENST00000566510 CD2BP2O95400 341 aaKnown RBP17.74■□□□□ 0.43
CDH1-209ENST00000566510 LMOD3Q0VAK6 560 aa17.74■□□□□ 0.43
CDH1-209ENST00000566510 CDC42BPGQ6DT37 1551 aa17.73■□□□□ 0.43
CDH1-209ENST00000566510 ATP7BP35670 1465 aa17.73■□□□□ 0.43
CDH1-209ENST00000566510 ABCC4O15439 1325 aa17.73■□□□□ 0.43
CDH1-209ENST00000566510 ZNF853P0CG23 659 aa17.73■□□□□ 0.43
CDH1-209ENST00000566510 API5Q9BZZ5 524 aaKnown RBP17.73■□□□□ 0.43
CDH1-209ENST00000566510 PTCH1Q13635 1447 aa17.72■□□□□ 0.43
CDH1-209ENST00000566510 NUDT16Q96DE0 195 aaKnown RBP17.72■□□□□ 0.43
CDH1-209ENST00000566510 KIF2CQ99661 725 aa17.72■□□□□ 0.43
CDH1-209ENST00000566510 GBP4Q96PP9 640 aa17.72■□□□□ 0.43
CDH1-209ENST00000566510 APBB1O00213 710 aa17.71■□□□□ 0.43
CDH1-209ENST00000566510 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.43
CDH1-209ENST00000566510 RIMS2Q9UQ26 1411 aa17.71■□□□□ 0.43
CDH1-209ENST00000566510 EDC4Q6P2E9 1401 aaKnown RBP17.7■□□□□ 0.42
CDH1-209ENST00000566510 DDIT3P35638 169 aa17.7■□□□□ 0.42
CDH1-209ENST00000566510 DLG5Q8TDM6 1919 aa17.7■□□□□ 0.42
CDH1-209ENST00000566510 CDC45O75419 566 aa17.7■□□□□ 0.42
CDH1-209ENST00000566510 NCOA3Q9Y6Q9 1424 aa17.69■□□□□ 0.42
CDH1-209ENST00000566510 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
CDH1-209ENST00000566510 MRE11P49959 708 aa17.69■□□□□ 0.42
CDH1-209ENST00000566510 KRT24Q2M2I5 525 aa17.69■□□□□ 0.42
CDH1-209ENST00000566510 PIK3R4Q99570 1358 aa17.69■□□□□ 0.42
CDH1-209ENST00000566510 FAM69CQ0P6D2 419 aa17.69■□□□□ 0.42
CDH1-209ENST00000566510 C16orf71Q8IYS4 520 aaPredicted RBP17.68■□□□□ 0.42
CDH1-209ENST00000566510 SULT6B1Q6IMI4 303 aa17.68■□□□□ 0.42
CDH1-209ENST00000566510 AEBP1Q8IUX7 1158 aa17.68■□□□□ 0.42
CDH1-209ENST00000566510 GRPEL1Q9HAV7 217 aa17.68■□□□□ 0.42
CDH1-209ENST00000566510 CIZ1Q9ULV3 898 aaPredicted RBP17.68■□□□□ 0.42
CDH1-209ENST00000566510 CCDC61Q9Y6R9 512 aa17.68■□□□□ 0.42
CDH1-209ENST00000566510 NUTM2FA1L443 756 aa17.67■□□□□ 0.42
CDH1-209ENST00000566510 SOX12O15370 315 aa17.67■□□□□ 0.42
CDH1-209ENST00000566510 RAB3GAP1Q15042 981 aa17.67■□□□□ 0.42
CDH1-209ENST00000566510 A2ML1A8K2U0 1454 aa17.67■□□□□ 0.42
CDH1-209ENST00000566510 GSPT1P15170 499 aaKnown RBP17.67■□□□□ 0.42
CDH1-209ENST00000566510 CPSF1Q10570 1443 aaKnown RBP17.67■□□□□ 0.42
CDH1-209ENST00000566510 CDK12Q9NYV4 1490 aaPredicted RBP17.67■□□□□ 0.42
CDH1-209ENST00000566510 PLEKHM2Q8IWE5 1019 aa17.66■□□□□ 0.42
CDH1-209ENST00000566510 MCM10Q7L590 875 aa17.66■□□□□ 0.42
CDH1-209ENST00000566510 METP08581 1390 aa17.66■□□□□ 0.42
CDH1-209ENST00000566510 GAS2L2Q8NHY3 880 aa17.65■□□□□ 0.42
CDH1-209ENST00000566510 AK9Q5TCS8 1911 aa17.65■□□□□ 0.42
CDH1-209ENST00000566510 DLC1Q96QB1 1528 aa17.64■□□□□ 0.41
CDH1-209ENST00000566510 SSFA2P28290 1259 aa17.64■□□□□ 0.41
CDH1-209ENST00000566510 DCTPP1Q9H773 170 aa17.64■□□□□ 0.41
CDH1-209ENST00000566510 ESF1Q9H501 851 aaKnown RBP17.64■□□□□ 0.41
CDH1-209ENST00000566510 TSPOAP1O95153 1857 aa17.63■□□□□ 0.41
CDH1-209ENST00000566510 AATKQ6ZMQ8 1374 aa17.63■□□□□ 0.41
CDH1-209ENST00000566510 CPS1P31327 1500 aa17.63■□□□□ 0.41
CDH1-209ENST00000566510 SMARCA5O60264 1052 aaPredicted RBP17.63■□□□□ 0.41
CDH1-209ENST00000566510 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
CDH1-209ENST00000566510 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
CDH1-209ENST00000566510 TTC22Q5TAA0 569 aa17.62■□□□□ 0.41
CDH1-209ENST00000566510 SKOR2Q2VWA4 1001 aaPredicted RBP17.62■□□□□ 0.41
CDH1-209ENST00000566510 GOLGA6L22H0YM25 854 aa17.61■□□□□ 0.41
CDH1-209ENST00000566510 INTS3Q68E01 1043 aaKnown RBP17.61■□□□□ 0.41
CDH1-209ENST00000566510 MIS18AQ9NYP9 233 aa17.61■□□□□ 0.41
CDH1-209ENST00000566510 RIMBP3CA6NJZ7 1639 aa17.61■□□□□ 0.41
CDH1-209ENST00000566510 RIMBP3BA6NNM3 1639 aa17.61■□□□□ 0.41
CDH1-209ENST00000566510 RIMBP3Q9UFD9 1639 aa17.61■□□□□ 0.41
CDH1-209ENST00000566510 GAS2L3Q86XJ1 694 aa17.61■□□□□ 0.41
CDH1-209ENST00000566510 ANKRD44Q8N8A2 993 aa17.6■□□□□ 0.41
CDH1-209ENST00000566510 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDH1-209ENST00000566510 SLC4A10Q6U841 1118 aa17.6■□□□□ 0.41
CDH1-209ENST00000566510 KNDC1Q76NI1 1749 aa17.6■□□□□ 0.41
CDH1-209ENST00000566510 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
CDH1-209ENST00000566510 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
CDH1-209ENST00000566510 HSP90AB2PQ58FF8 381 aa17.59■□□□□ 0.41
CDH1-209ENST00000566510 CEP85Q6P2H3 762 aa17.59■□□□□ 0.41
CDH1-209ENST00000566510 CASC1Q6TDU7 716 aa17.59■□□□□ 0.41
CDH1-209ENST00000566510 TRIM44Q96DX7 344 aaPredicted RBP17.59■□□□□ 0.41
CDH1-209ENST00000566510 MEIS3Q99687 375 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms