RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SKIDA1Q1XH10 827 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 NFATC2IPQ8NCF5 419 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 UBXN6Q9BZV1 441 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 STAG3Q9UJ98 1225 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 CYP2C19P33261 490 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 KIF18AQ8NI77 898 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 ZNF592Q92610 1267 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 ZBTB9Q96C00 473 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 CERS3Q8IU89 383 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 GPT2Q8TD30 523 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 CHGAP10645 457 aaKnown RBP3.52□□□□□ -1.85
CHD9-218ENST00000566029 SH3BGRP55822 239 aaPredicted RBP3.52□□□□□ -1.85
CHD9-218ENST00000566029 RAD21O60216 631 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 CAVIN1Q6NZI2 390 aaKnown RBP3.52□□□□□ -1.85
CHD9-218ENST00000566029 KDM5CP41229 1560 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 ABCC10Q5T3U5 1492 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 WDR7Q9Y4E6 1490 aa3.52□□□□□ -1.85
CHD9-218ENST00000566029 KIF16BQ96L93 1317 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 REC8O95072 547 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 DIAPH3Q9NSV4 1193 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 ADGRL2O95490 1459 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 MBD3O95983 291 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 POLKQ9UBT6 870 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 PRAG1Q86YV5 1406 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 UHRF1BP1LA0JNW5 1464 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 RABEP1Q15276 862 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 MUM1L1Q5H9M0 696 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 MYCNP04198 464 aaPredicted RBP3.51□□□□□ -1.85
CHD9-218ENST00000566029 NUCB2P80303 420 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 MLECQ14165 292 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 TTC12Q9H892 705 aaPredicted RBP3.51□□□□□ -1.85
CHD9-218ENST00000566029 SIRT1Q96EB6 747 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 NSFL1CQ9UNZ2 370 aaKnown RBP3.51□□□□□ -1.85
CHD9-218ENST00000566029 NEFHP12036 1026 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 AK7Q96M32 723 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 MYCBPQ99417 103 aaPredicted RBP3.51□□□□□ -1.85
CHD9-218ENST00000566029 PES1O00541 588 aaKnown RBP3.51□□□□□ -1.85
CHD9-218ENST00000566029 VASPP50552 380 aaPredicted RBP3.51□□□□□ -1.85
CHD9-218ENST00000566029 CHAF1AQ13111 956 aaPredicted RBP3.51□□□□□ -1.85
CHD9-218ENST00000566029 PRPF40AO75400 957 aaKnown RBP3.51□□□□□ -1.85
CHD9-218ENST00000566029 KRT222Q8N1A0 295 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 SAMD9Q5K651 1589 aa3.51□□□□□ -1.85
CHD9-218ENST00000566029 FAM177BA6PVY3 158 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 BRD1O95696 1058 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 NUP160Q12769 1436 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 PPP1R12AO14974 1030 aaPredicted RBP3.5□□□□□ -1.85
CHD9-218ENST00000566029 NUCB1Q02818 461 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 HNRNPH2P55795 449 aaKnown RBP3.5□□□□□ -1.85
CHD9-218ENST00000566029 ICE2Q659A1 982 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 MTMR7Q9Y216 660 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 RSPH14Q9UHP6 348 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 BRMS1Q9HCU9 246 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 GOLGA6L1Q8N7Z2 621 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 MAGI2Q86UL8 1455 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 IQUBQ8NA54 791 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 SMARCA5O60264 1052 aaPredicted RBP3.5□□□□□ -1.85
CHD9-218ENST00000566029 RBM6P78332 1123 aaKnown RBP3.5□□□□□ -1.85
CHD9-218ENST00000566029 NAA30Q147X3 362 aaPredicted RBP3.5□□□□□ -1.85
CHD9-218ENST00000566029 MCTP1Q6DN14 999 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 CHAMP1Q96JM3 812 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 USP26Q9BXU7 913 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 PNMA1Q8ND90 353 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.5□□□□□ -1.85
CHD9-218ENST00000566029 PNMA2Q9UL42 364 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 DHX16O60231 1041 aaKnown RBP3.5□□□□□ -1.85
CHD9-218ENST00000566029 RAD50Q92878 1312 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 CDC45O75419 566 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 FAM184AQ8NB25 1140 aa3.5□□□□□ -1.85
CHD9-218ENST00000566029 POLR3AO14802 1390 aaPredicted RBP3.5□□□□□ -1.85
CHD9-218ENST00000566029 CWC22Q9HCG8 908 aaKnown RBP3.49□□□□□ -1.85
CHD9-218ENST00000566029 ZNF446Q9NWS9 450 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 NBPF20Q3BBV1 942 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 NOM1Q5C9Z4 860 aaKnown RBP3.49□□□□□ -1.85
CHD9-218ENST00000566029 SOGA3Q5TF21 947 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 KCNG1Q9UIX4 513 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 MVPQ14764 893 aaKnown RBP3.49□□□□□ -1.85
CHD9-218ENST00000566029 CARD10Q9BWT7 1032 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 PBRM1Q86U86 1689 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 CASQ1P31415 396 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 FLIIQ13045 1269 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 BMP2KLQ5H9B9 411 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 FUCA2Q9BTY2 467 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 DZIP1LQ8IYY4 767 aaKnown RBP3.49□□□□□ -1.85
CHD9-218ENST00000566029 PIK3R5Q8WYR1 880 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 ERICH4A6NGS2 130 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 AP5Z1O43299 807 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 MPNDQ8N594 471 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 FRMD4BQ9Y2L6 1034 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 SYCE3A1L190 88 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 RIPPLY1Q0D2K3 151 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 KRI1Q8N9T8 703 aaKnown RBP3.49□□□□□ -1.85
CHD9-218ENST00000566029 IQSEC2Q5JU85 1478 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 CTTNBP2Q8WZ74 1663 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 GNL2Q13823 731 aaKnown RBP3.49□□□□□ -1.85
CHD9-218ENST00000566029 GRIPAP1Q4V328 841 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 KMT5BQ4FZB7 885 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 ZNF215Q9UL58 517 aaPredicted RBP3.49□□□□□ -1.85
CHD9-218ENST00000566029 ANKRD36BQ8N2N9 1353 aa3.49□□□□□ -1.85
CHD9-218ENST00000566029 BRPF1P55201 1214 aaPredicted RBP3.48□□□□□ -1.85
CHD9-218ENST00000566029 DHX8Q14562 1220 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms