RNA–Protein interactions for RNA: ENST00000565124.4

TCF4-227, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-227ENST00000565124 PLEKHG3A1L390 1219 aa10.38□□□□□ -0.75
TCF4-227ENST00000565124 USP6P35125 1406 aa10.38□□□□□ -0.75
TCF4-227ENST00000565124 NLRP6P59044 892 aa10.37□□□□□ -0.75
TCF4-227ENST00000565124 CCDC184Q52MB2 194 aa10.37□□□□□ -0.75
TCF4-227ENST00000565124 PROSER2Q86WR7 435 aaPredicted RBP10.37□□□□□ -0.75
TCF4-227ENST00000565124 YTHDC1Q96MU7 727 aaKnown RBP10.37□□□□□ -0.75
TCF4-227ENST00000565124 LRRC7Q96NW7 1537 aa10.37□□□□□ -0.75
TCF4-227ENST00000565124 POLR3AO14802 1390 aaPredicted RBP10.37□□□□□ -0.75
TCF4-227ENST00000565124 TMEM94Q12767 1356 aa10.37□□□□□ -0.75
TCF4-227ENST00000565124 PPP2R1AP30153 589 aa10.36□□□□□ -0.75
TCF4-227ENST00000565124 FBXO22Q8NEZ5 403 aa10.36□□□□□ -0.75
TCF4-227ENST00000565124 PIK3C2AO00443 1686 aa10.36□□□□□ -0.75
TCF4-227ENST00000565124 SHPRHQ149N8 1683 aa10.36□□□□□ -0.75
TCF4-227ENST00000565124 MARF1Q9Y4F3 1742 aaKnown RBP10.36□□□□□ -0.75
TCF4-227ENST00000565124 C14orf37Q86TY3 774 aa10.35□□□□□ -0.75
TCF4-227ENST00000565124 MORC1Q86VD1 984 aa10.35□□□□□ -0.75
TCF4-227ENST00000565124 ACEP12821 1306 aa10.34□□□□□ -0.75
TCF4-227ENST00000565124 SSH2Q76I76 1423 aa10.34□□□□□ -0.75
TCF4-227ENST00000565124 TRPM3Q9HCF6 1732 aaPredicted RBP10.34□□□□□ -0.75
TCF4-227ENST00000565124 NUTM2FA1L443 756 aa10.34□□□□□ -0.75
TCF4-227ENST00000565124 CENPBP07199 599 aaPredicted RBP10.34□□□□□ -0.75
TCF4-227ENST00000565124 INSRP06213 1382 aa10.34□□□□□ -0.75
TCF4-227ENST00000565124 OVOS2A0A0J9YW53 1432 aa10.33□□□□□ -0.76
TCF4-227ENST00000565124 MST1RQ04912 1400 aa10.33□□□□□ -0.76
TCF4-227ENST00000565124 OVOS2Q6IE36 1432 aa10.33□□□□□ -0.76
TCF4-227ENST00000565124 SOX12O15370 315 aa10.33□□□□□ -0.76
TCF4-227ENST00000565124 MSH6P52701 1360 aa10.33□□□□□ -0.76
TCF4-227ENST00000565124 TTC21AQ8NDW8 1320 aa10.33□□□□□ -0.76
TCF4-227ENST00000565124 C1orf167Q5SNV9 1468 aa10.32□□□□□ -0.76
TCF4-227ENST00000565124 FYB1O15117 783 aa10.32□□□□□ -0.76
TCF4-227ENST00000565124 RBM33Q96EV2 1170 aaKnown RBP10.32□□□□□ -0.76
TCF4-227ENST00000565124 C19orf44Q9H6X5 657 aa10.32□□□□□ -0.76
TCF4-227ENST00000565124 SMG6Q86US8 1419 aaKnown RBP10.32□□□□□ -0.76
TCF4-227ENST00000565124 TTC21BQ7Z4L5 1316 aa10.32□□□□□ -0.76
TCF4-227ENST00000565124 ZNF335Q9H4Z2 1342 aaPredicted RBP10.32□□□□□ -0.76
TCF4-227ENST00000565124 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
TCF4-227ENST00000565124 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.31□□□□□ -0.76
TCF4-227ENST00000565124 FAM9BQ8IZU0 186 aa10.31□□□□□ -0.76
TCF4-227ENST00000565124 NGDNQ8NEJ9 315 aaKnown RBP10.31□□□□□ -0.76
TCF4-227ENST00000565124 PNISRQ8TF01 805 aaKnown RBP10.31□□□□□ -0.76
TCF4-227ENST00000565124 GGNBP2Q9H3C7 697 aa10.31□□□□□ -0.76
TCF4-227ENST00000565124 BLMP54132 1417 aaPredicted RBP10.31□□□□□ -0.76
TCF4-227ENST00000565124 COL3A1P02461 1466 aaPredicted RBP10.3□□□□□ -0.76
TCF4-227ENST00000565124 PMFBP1Q8TBY8 1022 aa10.3□□□□□ -0.76
TCF4-227ENST00000565124 TMEM106CQ9BVX2 250 aa10.3□□□□□ -0.76
TCF4-227ENST00000565124 ALS2Q96Q42 1657 aa10.3□□□□□ -0.76
TCF4-227ENST00000565124 CDK12Q9NYV4 1490 aaPredicted RBP10.3□□□□□ -0.76
TCF4-227ENST00000565124 AATKQ6ZMQ8 1374 aa10.29□□□□□ -0.76
TCF4-227ENST00000565124 USP31Q70CQ4 1352 aa10.29□□□□□ -0.76
TCF4-227ENST00000565124 ATF3P18847 181 aa10.29□□□□□ -0.76
TCF4-227ENST00000565124 NME9Q86XW9 330 aa10.29□□□□□ -0.76
TCF4-227ENST00000565124 TRPC6Q9Y210 931 aa10.29□□□□□ -0.76
TCF4-227ENST00000565124 LTBP4Q8N2S1 1624 aa10.29□□□□□ -0.76
TCF4-227ENST00000565124 LTN1O94822 1766 aa10.29□□□□□ -0.76
TCF4-227ENST00000565124 TNNT2P45379 298 aaPredicted RBP10.28□□□□□ -0.76
TCF4-227ENST00000565124 MS4A3Q96HJ5 214 aa10.28□□□□□ -0.76
TCF4-227ENST00000565124 COG3Q96JB2 828 aa10.28□□□□□ -0.76
TCF4-227ENST00000565124 CFAP53Q96M91 514 aa10.28□□□□□ -0.76
TCF4-227ENST00000565124 NHSL1Q5SYE7 1610 aa10.27□□□□□ -0.77
TCF4-227ENST00000565124 HNRNPUQ00839 825 aaKnown RBP eCLIP10.27□□□□□ -0.77
TCF4-227ENST00000565124 WDR43Q15061 677 aaKnown RBP eCLIP10.27□□□□□ -0.77
TCF4-227ENST00000565124 ESCO1Q5FWF5 840 aa10.27□□□□□ -0.77
TCF4-227ENST00000565124 PEAK1Q9H792 1746 aa10.27□□□□□ -0.77
TCF4-227ENST00000565124 PHRF1Q9P1Y6 1649 aaKnown RBP10.26□□□□□ -0.77
TCF4-227ENST00000565124 MS4A4AQ96JQ5 239 aa10.26□□□□□ -0.77
TCF4-227ENST00000565124 ZBED9Q6R2W3 1325 aa10.26□□□□□ -0.77
TCF4-227ENST00000565124 CRYBG1Q9Y4K1 1723 aa10.25□□□□□ -0.77
TCF4-227ENST00000565124 SLIT3O75094 1523 aa10.25□□□□□ -0.77
TCF4-227ENST00000565124 MTHFSP49914 203 aa10.25□□□□□ -0.77
TCF4-227ENST00000565124 PNPLA6Q8IY17 1366 aa10.25□□□□□ -0.77
TCF4-227ENST00000565124 NFAT5O94916 1531 aa10.24□□□□□ -0.77
TCF4-227ENST00000565124 MED1Q15648 1581 aaPredicted RBP10.24□□□□□ -0.77
TCF4-227ENST00000565124 LMOD2Q6P5Q4 547 aa10.24□□□□□ -0.77
TCF4-227ENST00000565124 ORAI2Q96SN7 254 aa10.24□□□□□ -0.77
TCF4-227ENST00000565124 PXDNQ92626 1479 aa10.23□□□□□ -0.77
TCF4-227ENST00000565124 E2F4Q16254 413 aa10.23□□□□□ -0.77
TCF4-227ENST00000565124 LARP6Q9BRS8 491 aaKnown RBP10.23□□□□□ -0.77
TCF4-227ENST00000565124 RGPD1P0DJD0 1748 aa10.23□□□□□ -0.77
TCF4-227ENST00000565124 ABCA3Q99758 1704 aa10.22□□□□□ -0.77
TCF4-227ENST00000565124 PSME1Q06323 249 aa10.22□□□□□ -0.77
TCF4-227ENST00000565124 MKRN3Q13064 507 aaKnown RBP10.22□□□□□ -0.77
TCF4-227ENST00000565124 POLKQ9UBT6 870 aa10.22□□□□□ -0.77
TCF4-227ENST00000565124 NPHP3Q7Z494 1330 aa10.22□□□□□ -0.77
TCF4-227ENST00000565124 SBNO1A3KN83 1393 aa10.22□□□□□ -0.77
TCF4-227ENST00000565124 TNS3Q68CZ2 1445 aa10.22□□□□□ -0.77
TCF4-227ENST00000565124 IQSEC2Q5JU85 1478 aa10.22□□□□□ -0.77
TCF4-227ENST00000565124 ADAMTS8Q9UP79 889 aa10.21□□□□□ -0.77
TCF4-227ENST00000565124 RTL1A6NKG5 1358 aa10.21□□□□□ -0.78
TCF4-227ENST00000565124 KIF24Q5T7B8 1368 aa10.21□□□□□ -0.78
TCF4-227ENST00000565124 ROBO1Q9Y6N7 1651 aa10.21□□□□□ -0.78
TCF4-227ENST00000565124 FOXO3O43524 673 aa10.2□□□□□ -0.78
TCF4-227ENST00000565124 USP19O94966 1318 aa10.2□□□□□ -0.78
TCF4-227ENST00000565124 FLT4P35916 1363 aa10.2□□□□□ -0.78
TCF4-227ENST00000565124 AHDC1Q5TGY3 1603 aaPredicted RBP10.2□□□□□ -0.78
TCF4-227ENST00000565124 ABTB2Q8N961 1025 aa10.2□□□□□ -0.78
TCF4-227ENST00000565124 NUDCQ9Y266 331 aa10.2□□□□□ -0.78
TCF4-227ENST00000565124 EMILIN1Q9Y6C2 1016 aa10.2□□□□□ -0.78
TCF4-227ENST00000565124 ABCC6O95255 1503 aa10.19□□□□□ -0.78
TCF4-227ENST00000565124 DIAPH1O60610 1272 aaKnown RBP10.19□□□□□ -0.78
TCF4-227ENST00000565124 RRS1Q15050 365 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms