RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 DDX17Q92841 729 aaKnown RBP10.1□□□□□ -0.79
GINS3-205ENST00000564814 NCAPD2Q15021 1401 aa10.09□□□□□ -0.79
GINS3-205ENST00000564814 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
GINS3-205ENST00000564814 MTHFSP49914 203 aa10.09□□□□□ -0.79
GINS3-205ENST00000564814 ZRANB1Q9UGI0 708 aa10.09□□□□□ -0.79
GINS3-205ENST00000564814 MAP3K19Q56UN5 1328 aa10.08□□□□□ -0.8
GINS3-205ENST00000564814 XPCQ01831 940 aaPredicted RBP10.08□□□□□ -0.8
GINS3-205ENST00000564814 ZNF772Q68DY9 489 aaPredicted RBP10.08□□□□□ -0.8
GINS3-205ENST00000564814 COL14A1Q05707 1796 aaKnown RBP10.07□□□□□ -0.8
GINS3-205ENST00000564814 PNISRQ8TF01 805 aaKnown RBP10.07□□□□□ -0.8
GINS3-205ENST00000564814 IP6K1Q92551 441 aa10.07□□□□□ -0.8
GINS3-205ENST00000564814 CFAP53Q96M91 514 aa10.07□□□□□ -0.8
GINS3-205ENST00000564814 NWD2Q9ULI1 1742 aa10.07□□□□□ -0.8
GINS3-205ENST00000564814 KDRP35968 1356 aa10.05□□□□□ -0.8
GINS3-205ENST00000564814 HOXC9P31274 260 aa10.05□□□□□ -0.8
GINS3-205ENST00000564814 NCBP3Q53F19 620 aaKnown RBP10.05□□□□□ -0.8
GINS3-205ENST00000564814 MRS2Q9HD23 443 aa10.05□□□□□ -0.8
GINS3-205ENST00000564814 EMILIN1Q9Y6C2 1016 aa10.05□□□□□ -0.8
GINS3-205ENST00000564814 AFF2P51816 1311 aa10.05□□□□□ -0.8
GINS3-205ENST00000564814 RXRBP28702 533 aa10.04□□□□□ -0.8
GINS3-205ENST00000564814 RRS1Q15050 365 aaKnown RBP10.04□□□□□ -0.8
GINS3-205ENST00000564814 CCDC184Q52MB2 194 aa10.04□□□□□ -0.8
GINS3-205ENST00000564814 C8orf37Q96NL8 207 aa10.04□□□□□ -0.8
GINS3-205ENST00000564814 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.04□□□□□ -0.8
GINS3-205ENST00000564814 DIAPH1O60610 1272 aaKnown RBP10.03□□□□□ -0.8
GINS3-205ENST00000564814 IL13P35225 146 aa10.03□□□□□ -0.8
GINS3-205ENST00000564814 RGPD5Q99666 1765 aa10.03□□□□□ -0.8
GINS3-205ENST00000564814 ERBB3P21860 1342 aa10.03□□□□□ -0.8
GINS3-205ENST00000564814 IGSF1Q8N6C5 1336 aa10.03□□□□□ -0.8
GINS3-205ENST00000564814 SLIT2O94813 1529 aa10.02□□□□□ -0.8
GINS3-205ENST00000564814 KIAA0232Q92628 1395 aa10.02□□□□□ -0.8
GINS3-205ENST00000564814 NRAPQ86VF7 1730 aa10.02□□□□□ -0.8
GINS3-205ENST00000564814 ADAMTS2O95450 1211 aa10.02□□□□□ -0.81
GINS3-205ENST00000564814 TNNT2P45379 298 aaPredicted RBP10.02□□□□□ -0.81
GINS3-205ENST00000564814 NUTM2GQ5VZR2 741 aa10.02□□□□□ -0.81
GINS3-205ENST00000564814 NGEFQ8N5V2 710 aa10.02□□□□□ -0.81
GINS3-205ENST00000564814 NUDCQ9Y266 331 aa10.02□□□□□ -0.81
GINS3-205ENST00000564814 COL5A2P05997 1499 aaPredicted RBP10.02□□□□□ -0.81
GINS3-205ENST00000564814 PLCH1Q4KWH8 1693 aa10.02□□□□□ -0.81
GINS3-205ENST00000564814 FBLN1P23142 703 aa10.01□□□□□ -0.81
GINS3-205ENST00000564814 AMPHP49418 695 aa10.01□□□□□ -0.81
GINS3-205ENST00000564814 LMOD2Q6P5Q4 547 aa10.01□□□□□ -0.81
GINS3-205ENST00000564814 QTRT2Q9H974 415 aaKnown RBP10.01□□□□□ -0.81
GINS3-205ENST00000564814 LRP5O75197 1615 aa10□□□□□ -0.81
GINS3-205ENST00000564814 FCHSD2O94868 740 aa10□□□□□ -0.81
GINS3-205ENST00000564814 EIF4A2Q14240 407 aaKnown RBP10□□□□□ -0.81
GINS3-205ENST00000564814 HSP90AB2PQ58FF8 381 aa10□□□□□ -0.81
GINS3-205ENST00000564814 NGLY1Q96IV0 654 aa10□□□□□ -0.81
GINS3-205ENST00000564814 CABLES1Q8TDN4 633 aa9.99□□□□□ -0.81
GINS3-205ENST00000564814 PNNQ9H307 717 aaKnown RBP9.99□□□□□ -0.81
GINS3-205ENST00000564814 PRDM11Q9NQV5 511 aa9.99□□□□□ -0.81
GINS3-205ENST00000564814 ZC3H6P61129 1189 aaKnown RBP9.98□□□□□ -0.81
GINS3-205ENST00000564814 RBM6P78332 1123 aaKnown RBP9.98□□□□□ -0.81
GINS3-205ENST00000564814 WDR43Q15061 677 aaKnown RBP eCLIP9.98□□□□□ -0.81
GINS3-205ENST00000564814 PLEKHF1Q96S99 279 aa9.98□□□□□ -0.81
GINS3-205ENST00000564814 AXIN2Q9Y2T1 843 aa9.98□□□□□ -0.81
GINS3-205ENST00000564814 WDR17Q8IZU2 1322 aa9.98□□□□□ -0.81
GINS3-205ENST00000564814 RGPD2P0DJD1 1756 aa9.98□□□□□ -0.81
GINS3-205ENST00000564814 FAM83GA6ND36 823 aa9.97□□□□□ -0.81
GINS3-205ENST00000564814 CNGB1Q14028 1251 aaPredicted RBP9.97□□□□□ -0.81
GINS3-205ENST00000564814 FNBP4Q8N3X1 1017 aaPredicted RBP9.97□□□□□ -0.81
GINS3-205ENST00000564814 EYA1Q99502 592 aa9.97□□□□□ -0.81
GINS3-205ENST00000564814 RSPH6AQ9H0K4 717 aa9.97□□□□□ -0.81
GINS3-205ENST00000564814 ADAMTS8Q9UP79 889 aa9.97□□□□□ -0.81
GINS3-205ENST00000564814 WNK3Q9BYP7 1800 aa9.97□□□□□ -0.81
GINS3-205ENST00000564814 RGS12O14924 1447 aa9.97□□□□□ -0.81
GINS3-205ENST00000564814 CRB1P82279 1406 aa9.97□□□□□ -0.81
GINS3-205ENST00000564814 PKD1L3Q7Z443 1732 aa9.96□□□□□ -0.81
GINS3-205ENST00000564814 HAP1P54257 671 aaPredicted RBP9.96□□□□□ -0.82
GINS3-205ENST00000564814 ANKRD24Q8TF21 1146 aa9.96□□□□□ -0.82
GINS3-205ENST00000564814 USP21Q9UK80 565 aa9.96□□□□□ -0.82
GINS3-205ENST00000564814 PARP4Q9UKK3 1724 aaKnown RBP9.96□□□□□ -0.82
GINS3-205ENST00000564814 PPM1GO15355 546 aaPredicted RBP9.95□□□□□ -0.82
GINS3-205ENST00000564814 SOX12O15370 315 aa9.95□□□□□ -0.82
GINS3-205ENST00000564814 CCDC27Q2M243 656 aa9.95□□□□□ -0.82
GINS3-205ENST00000564814 RUNDC1Q96C34 613 aa9.95□□□□□ -0.82
GINS3-205ENST00000564814 CARD10Q9BWT7 1032 aa9.95□□□□□ -0.82
GINS3-205ENST00000564814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.95□□□□□ -0.82
GINS3-205ENST00000564814 BCL9LQ86UU0 1499 aa9.95□□□□□ -0.82
GINS3-205ENST00000564814 ADAMTS7Q9UKP4 1686 aa9.95□□□□□ -0.82
GINS3-205ENST00000564814 DISP2A7MBM2 1401 aa9.94□□□□□ -0.82
GINS3-205ENST00000564814 U2AF1L5P0DN76 240 aaPredicted RBP9.94□□□□□ -0.82
GINS3-205ENST00000564814 U2AF1Q01081 240 aaKnown RBP eCLIP9.94□□□□□ -0.82
GINS3-205ENST00000564814 THRAP3Q9Y2W1 955 aaKnown RBP9.94□□□□□ -0.82
GINS3-205ENST00000564814 PLEKHG5O94827 1062 aa9.93□□□□□ -0.82
GINS3-205ENST00000564814 CHRNA2Q15822 529 aa9.93□□□□□ -0.82
GINS3-205ENST00000564814 NBPF6Q5VWK0 638 aa9.93□□□□□ -0.82
GINS3-205ENST00000564814 FAM9BQ8IZU0 186 aa9.93□□□□□ -0.82
GINS3-205ENST00000564814 NBPF4Q96M43 638 aa9.93□□□□□ -0.82
GINS3-205ENST00000564814 TRPC5Q9UL62 973 aaPredicted RBP9.93□□□□□ -0.82
GINS3-205ENST00000564814 OVOS2A0A0G2JMS6 1433 aa9.92□□□□□ -0.82
GINS3-205ENST00000564814 DLG5Q8TDM6 1919 aa9.92□□□□□ -0.82
GINS3-205ENST00000564814 ZBED9Q6R2W3 1325 aa9.92□□□□□ -0.82
GINS3-205ENST00000564814 ZNF521Q96K83 1311 aa9.92□□□□□ -0.82
GINS3-205ENST00000564814 U2SURPO15042 1029 aaKnown RBP9.92□□□□□ -0.82
GINS3-205ENST00000564814 SULT6B1Q6IMI4 303 aa9.92□□□□□ -0.82
GINS3-205ENST00000564814 BTG4Q9NY30 223 aa9.92□□□□□ -0.82
GINS3-205ENST00000564814 SHANK3Q9BYB0 1731 aa9.91□□□□□ -0.82
GINS3-205ENST00000564814 VPS72Q15906 364 aa9.91□□□□□ -0.82
GINS3-205ENST00000564814 AMOTQ4VCS5 1084 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms