RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SIRT2Q8IXJ6 389 aa19.4■□□□□ 0.7
GTF3C1-205ENST00000564747 EIF5BO60841 1220 aaKnown RBP19.4■□□□□ 0.7
GTF3C1-205ENST00000564747 BMP2KLQ5H9B9 411 aa19.4■□□□□ 0.7
GTF3C1-205ENST00000564747 WASLO00401 505 aaPredicted RBP19.39■□□□□ 0.7
GTF3C1-205ENST00000564747 RRS1Q15050 365 aaKnown RBP19.39■□□□□ 0.7
GTF3C1-205ENST00000564747 C8orf58Q8NAV2 365 aa19.39■□□□□ 0.7
GTF3C1-205ENST00000564747 GCC1Q96CN9 775 aa19.39■□□□□ 0.7
GTF3C1-205ENST00000564747 ZNF692Q9BU19 519 aaPredicted RBP19.39■□□□□ 0.7
GTF3C1-205ENST00000564747 A2ML1A8K2U0 1454 aa19.39■□□□□ 0.7
GTF3C1-205ENST00000564747 TWISTNBQ3B726 338 aaPredicted RBP19.39■□□□□ 0.69
GTF3C1-205ENST00000564747 RIMS2Q9UQ26 1411 aa19.39■□□□□ 0.69
GTF3C1-205ENST00000564747 FAM83GA6ND36 823 aa19.38■□□□□ 0.69
GTF3C1-205ENST00000564747 L1TD1Q5T7N2 865 aaKnown RBP19.38■□□□□ 0.69
GTF3C1-205ENST00000564747 CPSF1Q10570 1443 aaKnown RBP19.38■□□□□ 0.69
GTF3C1-205ENST00000564747 PIK3R4Q99570 1358 aa19.38■□□□□ 0.69
GTF3C1-205ENST00000564747 DLC1Q96QB1 1528 aa19.38■□□□□ 0.69
GTF3C1-205ENST00000564747 PTCH1Q13635 1447 aa19.38■□□□□ 0.69
GTF3C1-205ENST00000564747 TXNDC2Q86VQ3 553 aa19.38■□□□□ 0.69
GTF3C1-205ENST00000564747 EDC4Q6P2E9 1401 aaKnown RBP19.37■□□□□ 0.69
GTF3C1-205ENST00000564747 MLECQ14165 292 aa19.37■□□□□ 0.69
GTF3C1-205ENST00000564747 DCTN1Q14203 1278 aa19.37■□□□□ 0.69
GTF3C1-205ENST00000564747 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
GTF3C1-205ENST00000564747 CFAP44Q96MT7 982 aa19.37■□□□□ 0.69
GTF3C1-205ENST00000564747 CHMP4BQ9H444 224 aaKnown RBP19.37■□□□□ 0.69
GTF3C1-205ENST00000564747 ABCC4O15439 1325 aa19.36■□□□□ 0.69
GTF3C1-205ENST00000564747 TRAK2O60296 914 aa19.36■□□□□ 0.69
GTF3C1-205ENST00000564747 SNX21Q969T3 373 aa19.36■□□□□ 0.69
GTF3C1-205ENST00000564747 NUDT16Q96DE0 195 aaKnown RBP19.36■□□□□ 0.69
GTF3C1-205ENST00000564747 FAM69CQ0P6D2 419 aa19.35■□□□□ 0.69
GTF3C1-205ENST00000564747 COG3Q96JB2 828 aa19.35■□□□□ 0.69
GTF3C1-205ENST00000564747 KIF2CQ99661 725 aa19.35■□□□□ 0.69
GTF3C1-205ENST00000564747 DDIT3P35638 169 aa19.35■□□□□ 0.69
GTF3C1-205ENST00000564747 XRCC6P12956 609 aaKnown RBP eCLIP19.34■□□□□ 0.69
GTF3C1-205ENST00000564747 METP08581 1390 aa19.34■□□□□ 0.69
GTF3C1-205ENST00000564747 TBC1D9Q6ZT07 1266 aa19.34■□□□□ 0.69
GTF3C1-205ENST00000564747 GOLGA6L3A6NEY3 463 aa19.33■□□□□ 0.69
GTF3C1-205ENST00000564747 NCOA3Q9Y6Q9 1424 aa19.33■□□□□ 0.69
GTF3C1-205ENST00000564747 CDK12Q9NYV4 1490 aaPredicted RBP19.33■□□□□ 0.69
GTF3C1-205ENST00000564747 RIMBP3CA6NJZ7 1639 aa19.33■□□□□ 0.69
GTF3C1-205ENST00000564747 RIMBP3BA6NNM3 1639 aa19.33■□□□□ 0.69
GTF3C1-205ENST00000564747 RIMBP3Q9UFD9 1639 aa19.33■□□□□ 0.69
GTF3C1-205ENST00000564747 AATKQ6ZMQ8 1374 aa19.33■□□□□ 0.68
GTF3C1-205ENST00000564747 SETD1AO15047 1707 aaKnown RBP19.33■□□□□ 0.68
GTF3C1-205ENST00000564747 FSD2A1L4K1 749 aa19.32■□□□□ 0.68
GTF3C1-205ENST00000564747 LMOD3Q0VAK6 560 aa19.32■□□□□ 0.68
GTF3C1-205ENST00000564747 CCDC61Q9Y6R9 512 aa19.32■□□□□ 0.68
GTF3C1-205ENST00000564747 CPS1P31327 1500 aa19.32■□□□□ 0.68
GTF3C1-205ENST00000564747 CD2BP2O95400 341 aaKnown RBP19.32■□□□□ 0.68
GTF3C1-205ENST00000564747 HSP90AB1P08238 724 aaKnown RBP19.31■□□□□ 0.68
GTF3C1-205ENST00000564747 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
GTF3C1-205ENST00000564747 DLG5Q8TDM6 1919 aa19.31■□□□□ 0.68
GTF3C1-205ENST00000564747 API5Q9BZZ5 524 aaKnown RBP19.31■□□□□ 0.68
GTF3C1-205ENST00000564747 RBM42Q9BTD8 480 aaKnown RBP19.3■□□□□ 0.68
GTF3C1-205ENST00000564747 TNPO1Q92973 898 aaKnown RBP19.29■□□□□ 0.68
GTF3C1-205ENST00000564747 PANK2Q9BZ23 570 aa19.29■□□□□ 0.68
GTF3C1-205ENST00000564747 AEBP1Q8IUX7 1158 aa19.29■□□□□ 0.68
GTF3C1-205ENST00000564747 FOXD4L1Q9NU39 408 aa19.29■□□□□ 0.68
GTF3C1-205ENST00000564747 KRT24Q2M2I5 525 aa19.28■□□□□ 0.68
GTF3C1-205ENST00000564747 SPATA31D1Q6ZQQ2 1576 aa19.28■□□□□ 0.68
GTF3C1-205ENST00000564747 DDX11L8A8MPP1 907 aa19.28■□□□□ 0.68
GTF3C1-205ENST00000564747 GSPT1P15170 499 aaKnown RBP19.27■□□□□ 0.68
GTF3C1-205ENST00000564747 RRAGDQ9NQL2 400 aaPredicted RBP19.27■□□□□ 0.68
GTF3C1-205ENST00000564747 NRXN3Q9Y4C0 1643 aa19.27■□□□□ 0.67
GTF3C1-205ENST00000564747 SULT6B1Q6IMI4 303 aa19.26■□□□□ 0.67
GTF3C1-205ENST00000564747 PLEKHM2Q8IWE5 1019 aa19.26■□□□□ 0.67
GTF3C1-205ENST00000564747 PRR36Q9H6K5 1346 aa19.26■□□□□ 0.67
GTF3C1-205ENST00000564747 C16orf71Q8IYS4 520 aaPredicted RBP19.26■□□□□ 0.67
GTF3C1-205ENST00000564747 HSP90AA1P07900 732 aaKnown RBP19.25■□□□□ 0.67
GTF3C1-205ENST00000564747 DCTPP1Q9H773 170 aa19.25■□□□□ 0.67
GTF3C1-205ENST00000564747 AGLP35573 1532 aa19.25■□□□□ 0.67
GTF3C1-205ENST00000564747 TSPOAP1O95153 1857 aa19.25■□□□□ 0.67
GTF3C1-205ENST00000564747 CDC45O75419 566 aa19.25■□□□□ 0.67
GTF3C1-205ENST00000564747 EIF4A2Q14240 407 aaKnown RBP19.25■□□□□ 0.67
GTF3C1-205ENST00000564747 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.25■□□□□ 0.67
GTF3C1-205ENST00000564747 CIZ1Q9ULV3 898 aaPredicted RBP19.25■□□□□ 0.67
GTF3C1-205ENST00000564747 K7ELQ4 463 aaPredicted RBP19.24■□□□□ 0.67
GTF3C1-205ENST00000564747 RAB3GAP1Q15042 981 aa19.24■□□□□ 0.67
GTF3C1-205ENST00000564747 INTS3Q68E01 1043 aaKnown RBP19.23■□□□□ 0.67
GTF3C1-205ENST00000564747 MCM10Q7L590 875 aa19.23■□□□□ 0.67
GTF3C1-205ENST00000564747 KNDC1Q76NI1 1749 aa19.23■□□□□ 0.67
GTF3C1-205ENST00000564747 UBE2Q2Q8WVN8 375 aa19.23■□□□□ 0.67
GTF3C1-205ENST00000564747 MON2Q7Z3U7 1717 aa19.22■□□□□ 0.67
GTF3C1-205ENST00000564747 NUTM2FA1L443 756 aa19.21■□□□□ 0.67
GTF3C1-205ENST00000564747 KIF24Q5T7B8 1368 aa19.21■□□□□ 0.67
GTF3C1-205ENST00000564747 REREQ9P2R6 1566 aa19.21■□□□□ 0.67
GTF3C1-205ENST00000564747 GAS2L2Q8NHY3 880 aa19.21■□□□□ 0.67
GTF3C1-205ENST00000564747 CHL1O00533 1208 aa19.21■□□□□ 0.67
GTF3C1-205ENST00000564747 OTUD7AQ8TE49 926 aaPredicted RBP19.21■□□□□ 0.67
GTF3C1-205ENST00000564747 GBP4Q96PP9 640 aa19.21■□□□□ 0.67
GTF3C1-205ENST00000564747 MRE11P49959 708 aa19.2■□□□□ 0.66
GTF3C1-205ENST00000564747 TTC22Q5TAA0 569 aa19.2■□□□□ 0.66
GTF3C1-205ENST00000564747 ANKRD44Q8N8A2 993 aa19.2■□□□□ 0.66
GTF3C1-205ENST00000564747 SIRT1Q96EB6 747 aa19.2■□□□□ 0.66
GTF3C1-205ENST00000564747 C3P01024 1663 aa19.2■□□□□ 0.66
GTF3C1-205ENST00000564747 HSP90AB2PQ58FF8 381 aa19.19■□□□□ 0.66
GTF3C1-205ENST00000564747 RGS12O14924 1447 aa19.19■□□□□ 0.66
GTF3C1-205ENST00000564747 TTC21BQ7Z4L5 1316 aa19.19■□□□□ 0.66
GTF3C1-205ENST00000564747 APBB1O00213 710 aa19.19■□□□□ 0.66
GTF3C1-205ENST00000564747 GRPEL1Q9HAV7 217 aa19.19■□□□□ 0.66
GTF3C1-205ENST00000564747 CEP85Q6P2H3 762 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms