RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 KDM2AQ9Y2K7 1162 aa14.79□□□□□ -0.04
SNX29-202ENST00000563308 SBF2Q86WG5 1849 aa14.78□□□□□ -0.04
SNX29-202ENST00000563308 STAC3Q96MF2 364 aa14.77□□□□□ -0.05
SNX29-202ENST00000563308 PARP4Q9UKK3 1724 aaKnown RBP14.77□□□□□ -0.05
SNX29-202ENST00000563308 HSPA1AP0DMV8 641 aaKnown RBP14.76□□□□□ -0.05
SNX29-202ENST00000563308 HSPA1BP0DMV9 641 aaKnown RBP14.76□□□□□ -0.05
SNX29-202ENST00000563308 TRAK1Q9UPV9 953 aa14.76□□□□□ -0.05
SNX29-202ENST00000563308 TOPAZ1Q8N9V7 1692 aa14.76□□□□□ -0.05
SNX29-202ENST00000563308 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
SNX29-202ENST00000563308 PTF1AQ7RTS3 328 aa14.75□□□□□ -0.05
SNX29-202ENST00000563308 POGKQ9P215 609 aa14.75□□□□□ -0.05
SNX29-202ENST00000563308 HTRA3P83110 453 aa14.74□□□□□ -0.05
SNX29-202ENST00000563308 ALS2Q96Q42 1657 aa14.74□□□□□ -0.05
SNX29-202ENST00000563308 NGDNQ8NEJ9 315 aaKnown RBP14.73□□□□□ -0.05
SNX29-202ENST00000563308 HIRIP3Q9BW71 556 aaPredicted RBP14.73□□□□□ -0.05
SNX29-202ENST00000563308 ATP7BP35670 1465 aa14.73□□□□□ -0.05
SNX29-202ENST00000563308 ANKARQ7Z5J8 1434 aa14.73□□□□□ -0.05
SNX29-202ENST00000563308 PEAK1Q9H792 1746 aa14.72□□□□□ -0.05
SNX29-202ENST00000563308 PRR36Q9H6K5 1346 aa14.72□□□□□ -0.05
SNX29-202ENST00000563308 TRPM3Q9HCF6 1732 aaPredicted RBP14.72□□□□□ -0.05
SNX29-202ENST00000563308 MINK1Q8N4C8 1332 aaPredicted RBP14.71□□□□□ -0.05
SNX29-202ENST00000563308 RBM46Q8TBY0 533 aaKnown RBP14.71□□□□□ -0.05
SNX29-202ENST00000563308 GOLGB1Q14789 3259 aaKnown RBP14.7□□□□□ -0.06
SNX29-202ENST00000563308 WASLO00401 505 aaPredicted RBP14.69□□□□□ -0.06
SNX29-202ENST00000563308 FSTL1Q12841 308 aa14.69□□□□□ -0.06
SNX29-202ENST00000563308 CRYBG1Q9Y4K1 1723 aa14.68□□□□□ -0.06
SNX29-202ENST00000563308 TNS2Q63HR2 1409 aa14.67□□□□□ -0.06
SNX29-202ENST00000563308 TULP4Q9NRJ4 1543 aa14.67□□□□□ -0.06
SNX29-202ENST00000563308 ARHGEF28Q8N1W1 1705 aaKnown RBP14.67□□□□□ -0.06
SNX29-202ENST00000563308 MSH5O43196 834 aa14.67□□□□□ -0.06
SNX29-202ENST00000563308 MLLT1Q03111 559 aaPredicted RBP14.67□□□□□ -0.06
SNX29-202ENST00000563308 CDCA7Q9BWT1 371 aaPredicted RBP14.67□□□□□ -0.06
SNX29-202ENST00000563308 TFCP2L1Q9NZI6 479 aa14.67□□□□□ -0.06
SNX29-202ENST00000563308 CRB1P82279 1406 aa14.66□□□□□ -0.06
SNX29-202ENST00000563308 ZNF827Q17R98 1081 aa14.66□□□□□ -0.06
SNX29-202ENST00000563308 NBPF1Q3BBV0 1214 aa14.66□□□□□ -0.06
SNX29-202ENST00000563308 MARCH10Q8NA82 808 aaPredicted RBP14.66□□□□□ -0.06
SNX29-202ENST00000563308 AKAP12Q02952 1782 aa14.65□□□□□ -0.06
SNX29-202ENST00000563308 EIF3AQ14152 1382 aaKnown RBP14.65□□□□□ -0.06
SNX29-202ENST00000563308 NUTM2GQ5VZR2 741 aa14.65□□□□□ -0.06
SNX29-202ENST00000563308 TOM1L2Q6ZVM7 507 aa14.65□□□□□ -0.06
SNX29-202ENST00000563308 BCL9O00512 1426 aa14.65□□□□□ -0.06
SNX29-202ENST00000563308 LRRC37A3O60309 1634 aa14.64□□□□□ -0.07
SNX29-202ENST00000563308 CD2APQ9Y5K6 639 aa14.64□□□□□ -0.07
SNX29-202ENST00000563308 KIAA1210Q9ULL0 1709 aa14.63□□□□□ -0.07
SNX29-202ENST00000563308 PHRF1Q9P1Y6 1649 aaKnown RBP14.63□□□□□ -0.07
SNX29-202ENST00000563308 NUDT16Q96DE0 195 aaKnown RBP14.63□□□□□ -0.07
SNX29-202ENST00000563308 ZBTB7CA1YPR0 619 aa14.62□□□□□ -0.07
SNX29-202ENST00000563308 EXOC5O00471 708 aa14.62□□□□□ -0.07
SNX29-202ENST00000563308 CDK19Q9BWU1 502 aa14.62□□□□□ -0.07
SNX29-202ENST00000563308 USP19O94966 1318 aa14.62□□□□□ -0.07
SNX29-202ENST00000563308 L3MBTL2Q969R5 705 aa14.61□□□□□ -0.07
SNX29-202ENST00000563308 NMRK2Q9NPI5 230 aa14.61□□□□□ -0.07
SNX29-202ENST00000563308 SIN3AQ96ST3 1273 aa14.6□□□□□ -0.07
SNX29-202ENST00000563308 PNPLA7Q6ZV29 1317 aa14.6□□□□□ -0.07
SNX29-202ENST00000563308 BRD4O60885 1362 aaPredicted RBP14.6□□□□□ -0.07
SNX29-202ENST00000563308 PAPPAQ13219 1627 aa14.59□□□□□ -0.07
SNX29-202ENST00000563308 COL24A1Q17RW2 1714 aa14.58□□□□□ -0.07
SNX29-202ENST00000563308 COL5A2P05997 1499 aaPredicted RBP14.58□□□□□ -0.08
SNX29-202ENST00000563308 AKT1S1Q96B36 256 aa14.58□□□□□ -0.08
SNX29-202ENST00000563308 ACSBG1Q96GR2 724 aa14.58□□□□□ -0.08
SNX29-202ENST00000563308 POLR3AO14802 1390 aaPredicted RBP14.58□□□□□ -0.08
SNX29-202ENST00000563308 CPDO75976 1380 aa14.58□□□□□ -0.08
SNX29-202ENST00000563308 QSER1Q2KHR3 1735 aa14.58□□□□□ -0.08
SNX29-202ENST00000563308 PLEKHG3A1L390 1219 aa14.57□□□□□ -0.08
SNX29-202ENST00000563308 SLC27A3Q5K4L6 730 aa14.57□□□□□ -0.08
SNX29-202ENST00000563308 ABTB2Q8N961 1025 aa14.56□□□□□ -0.08
SNX29-202ENST00000563308 SMC1BQ8NDV3 1235 aa14.56□□□□□ -0.08
SNX29-202ENST00000563308 PRDM10Q9NQV6 1147 aa14.56□□□□□ -0.08
SNX29-202ENST00000563308 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
SNX29-202ENST00000563308 LMO7Q8WWI1 1683 aa14.55□□□□□ -0.08
SNX29-202ENST00000563308 AIDAQ96BJ3 306 aa14.55□□□□□ -0.08
SNX29-202ENST00000563308 ACEP12821 1306 aa14.55□□□□□ -0.08
SNX29-202ENST00000563308 IGSF1Q8N6C5 1336 aa14.55□□□□□ -0.08
SNX29-202ENST00000563308 CENPJQ9HC77 1338 aaPredicted RBP14.55□□□□□ -0.08
SNX29-202ENST00000563308 ITSN1Q15811 1721 aa14.55□□□□□ -0.08
SNX29-202ENST00000563308 LRRC4BQ9NT99 713 aa14.54□□□□□ -0.08
SNX29-202ENST00000563308 KDM2BQ8NHM5 1336 aa14.54□□□□□ -0.08
SNX29-202ENST00000563308 NEUROD1Q13562 356 aa14.53□□□□□ -0.08
SNX29-202ENST00000563308 MSL1Q68DK7 614 aa14.53□□□□□ -0.08
SNX29-202ENST00000563308 KAT6BQ8WYB5 2073 aa14.53□□□□□ -0.08
SNX29-202ENST00000563308 NHSQ6T4R5 1651 aa14.52□□□□□ -0.08
SNX29-202ENST00000563308 CSB-PGBD3P0DP91 1061 aa14.52□□□□□ -0.09
SNX29-202ENST00000563308 NLRP13Q86W25 1043 aa14.52□□□□□ -0.09
SNX29-202ENST00000563308 ABHD8Q96I13 439 aa14.52□□□□□ -0.09
SNX29-202ENST00000563308 CABP2Q9NPB3 220 aa14.52□□□□□ -0.09
SNX29-202ENST00000563308 USP6P35125 1406 aa14.51□□□□□ -0.09
SNX29-202ENST00000563308 CCDC85CA6NKD9 419 aa14.51□□□□□ -0.09
SNX29-202ENST00000563308 GCP02774 474 aa14.51□□□□□ -0.09
SNX29-202ENST00000563308 TRPM1Q7Z4N2 1603 aa14.51□□□□□ -0.09
SNX29-202ENST00000563308 SRPK2P78362 688 aaKnown RBP14.5□□□□□ -0.09
SNX29-202ENST00000563308 PPIP5K1Q6PFW1 1433 aa14.49□□□□□ -0.09
SNX29-202ENST00000563308 CTCFP49711 727 aaPredicted RBP14.49□□□□□ -0.09
SNX29-202ENST00000563308 PCNTO95613 3336 aa14.49□□□□□ -0.09
SNX29-202ENST00000563308 QRICH2Q9H0J4 1663 aa14.49□□□□□ -0.09
SNX29-202ENST00000563308 WDR17Q8IZU2 1322 aa14.48□□□□□ -0.09
SNX29-202ENST00000563308 WNK3Q9BYP7 1800 aa14.48□□□□□ -0.09
SNX29-202ENST00000563308 PLEKHG2Q9H7P9 1386 aa14.47□□□□□ -0.09
SNX29-202ENST00000563308 ARHGAP27Q6ZUM4 889 aa14.47□□□□□ -0.09
SNX29-202ENST00000563308 CABP1Q9NZU7 370 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms