RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
CDH13-205ENST00000562307 RTL1A6NKG5 1358 aa12.47□□□□□ -0.41
CDH13-205ENST00000562307 USP19O94966 1318 aa12.47□□□□□ -0.41
CDH13-205ENST00000562307 IL16Q14005 1332 aa12.47□□□□□ -0.41
CDH13-205ENST00000562307 XIRP1Q702N8 1843 aaKnown RBP12.47□□□□□ -0.41
CDH13-205ENST00000562307 NEUROD2Q15784 382 aa12.47□□□□□ -0.41
CDH13-205ENST00000562307 NFE2L2Q16236 605 aa12.47□□□□□ -0.41
CDH13-205ENST00000562307 NUTM2GQ5VZR2 741 aa12.47□□□□□ -0.41
CDH13-205ENST00000562307 TRPM3Q9HCF6 1732 aaPredicted RBP12.47□□□□□ -0.41
CDH13-205ENST00000562307 NFAT5O94916 1531 aa12.47□□□□□ -0.41
CDH13-205ENST00000562307 ARHGEF10O15013 1369 aa12.46□□□□□ -0.41
CDH13-205ENST00000562307 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
CDH13-205ENST00000562307 NEFMP07197 916 aa12.46□□□□□ -0.41
CDH13-205ENST00000562307 HMOX1P09601 288 aa12.46□□□□□ -0.41
CDH13-205ENST00000562307 HOXC9P31274 260 aa12.46□□□□□ -0.41
CDH13-205ENST00000562307 AMPHP49418 695 aa12.46□□□□□ -0.41
CDH13-205ENST00000562307 RRP1P56182 461 aaKnown RBP12.46□□□□□ -0.41
CDH13-205ENST00000562307 RIPK4P57078 832 aa12.46□□□□□ -0.41
CDH13-205ENST00000562307 PHACTR3Q96KR7 559 aa12.46□□□□□ -0.41
CDH13-205ENST00000562307 SLIT3O75094 1523 aa12.46□□□□□ -0.42
CDH13-205ENST00000562307 NPHP3Q7Z494 1330 aa12.45□□□□□ -0.42
CDH13-205ENST00000562307 IP6K1Q92551 441 aa12.45□□□□□ -0.42
CDH13-205ENST00000562307 KDRP35968 1356 aa12.44□□□□□ -0.42
CDH13-205ENST00000562307 IGSF1Q8N6C5 1336 aa12.44□□□□□ -0.42
CDH13-205ENST00000562307 SOX12O15370 315 aa12.44□□□□□ -0.42
CDH13-205ENST00000562307 IRX6P78412 446 aaPredicted RBP12.44□□□□□ -0.42
CDH13-205ENST00000562307 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
CDH13-205ENST00000562307 GCP02774 474 aa12.43□□□□□ -0.42
CDH13-205ENST00000562307 XPCQ01831 940 aaPredicted RBP12.43□□□□□ -0.42
CDH13-205ENST00000562307 SULT6B1Q6IMI4 303 aa12.43□□□□□ -0.42
CDH13-205ENST00000562307 ARHGEF25Q86VW2 580 aa12.43□□□□□ -0.42
CDH13-205ENST00000562307 PHRF1Q9P1Y6 1649 aaKnown RBP12.43□□□□□ -0.42
CDH13-205ENST00000562307 ALS2Q96Q42 1657 aa12.42□□□□□ -0.42
CDH13-205ENST00000562307 BRINP3Q76B58 766 aa12.42□□□□□ -0.42
CDH13-205ENST00000562307 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
CDH13-205ENST00000562307 EYA1Q99502 592 aa12.42□□□□□ -0.42
CDH13-205ENST00000562307 PPP4R2Q9NY27 417 aa12.42□□□□□ -0.42
CDH13-205ENST00000562307 SLAIN2Q9P270 581 aa12.42□□□□□ -0.42
CDH13-205ENST00000562307 PXDNQ92626 1479 aa12.41□□□□□ -0.42
CDH13-205ENST00000562307 CT47B1P0C2W7 299 aaPredicted RBP12.41□□□□□ -0.42
CDH13-205ENST00000562307 LMOD3Q0VAK6 560 aa12.41□□□□□ -0.42
CDH13-205ENST00000562307 SPATA31A3Q5VYP0 1347 aa12.4□□□□□ -0.42
CDH13-205ENST00000562307 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
CDH13-205ENST00000562307 TNS3Q68CZ2 1445 aa12.39□□□□□ -0.43
CDH13-205ENST00000562307 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
CDH13-205ENST00000562307 SOS2Q07890 1332 aaPredicted RBP12.38□□□□□ -0.43
CDH13-205ENST00000562307 ZNF853P0CG23 659 aa12.38□□□□□ -0.43
CDH13-205ENST00000562307 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.38□□□□□ -0.43
CDH13-205ENST00000562307 DDX17Q92841 729 aaKnown RBP12.38□□□□□ -0.43
CDH13-205ENST00000562307 FANCIQ9NVI1 1328 aa12.37□□□□□ -0.43
CDH13-205ENST00000562307 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
CDH13-205ENST00000562307 LTN1O94822 1766 aa12.37□□□□□ -0.43
CDH13-205ENST00000562307 RARSP54136 660 aaKnown RBP12.36□□□□□ -0.43
CDH13-205ENST00000562307 GNAI1P63096 354 aa12.36□□□□□ -0.43
CDH13-205ENST00000562307 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
CDH13-205ENST00000562307 NCAPD2Q15021 1401 aa12.36□□□□□ -0.43
CDH13-205ENST00000562307 HTATSF1O43719 755 aaKnown RBP12.35□□□□□ -0.43
CDH13-205ENST00000562307 PLIN1O60240 522 aa12.35□□□□□ -0.43
CDH13-205ENST00000562307 MTHFSDQ2M296 383 aaKnown RBP12.35□□□□□ -0.43
CDH13-205ENST00000562307 NBPF6Q5VWK0 638 aa12.35□□□□□ -0.43
CDH13-205ENST00000562307 GAS2L2Q8NHY3 880 aa12.35□□□□□ -0.43
CDH13-205ENST00000562307 TSR2Q969E8 191 aaKnown RBP12.35□□□□□ -0.43
CDH13-205ENST00000562307 NBPF4Q96M43 638 aa12.35□□□□□ -0.43
CDH13-205ENST00000562307 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
CDH13-205ENST00000562307 CPDO75976 1380 aa12.34□□□□□ -0.43
CDH13-205ENST00000562307 LTBP4Q8N2S1 1624 aa12.34□□□□□ -0.43
CDH13-205ENST00000562307 ABCC6O95255 1503 aa12.34□□□□□ -0.43
CDH13-205ENST00000562307 BCAR3O75815 825 aa12.34□□□□□ -0.43
CDH13-205ENST00000562307 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
CDH13-205ENST00000562307 LTV1Q96GA3 475 aaPredicted RBP12.34□□□□□ -0.43
CDH13-205ENST00000562307 PDE3AQ14432 1141 aa12.33□□□□□ -0.44
CDH13-205ENST00000562307 EXOC6Q8TAG9 804 aa12.33□□□□□ -0.44
CDH13-205ENST00000562307 ZNF428Q96B54 188 aa12.33□□□□□ -0.44
CDH13-205ENST00000562307 THUMPD2Q9BTF0 503 aaKnown RBP12.33□□□□□ -0.44
CDH13-205ENST00000562307 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.44
CDH13-205ENST00000562307 CRYBG1Q9Y4K1 1723 aa12.32□□□□□ -0.44
CDH13-205ENST00000562307 FAM83GA6ND36 823 aa12.32□□□□□ -0.44
CDH13-205ENST00000562307 ANKRD24Q8TF21 1146 aa12.32□□□□□ -0.44
CDH13-205ENST00000562307 DLG5Q8TDM6 1919 aa12.32□□□□□ -0.44
CDH13-205ENST00000562307 CRB1P82279 1406 aa12.31□□□□□ -0.44
CDH13-205ENST00000562307 NHSL1Q5SYE7 1610 aa12.31□□□□□ -0.44
CDH13-205ENST00000562307 CHL1O00533 1208 aa12.31□□□□□ -0.44
CDH13-205ENST00000562307 ZC3H6P61129 1189 aaKnown RBP12.31□□□□□ -0.44
CDH13-205ENST00000562307 ALDH1L2Q3SY69 923 aa12.31□□□□□ -0.44
CDH13-205ENST00000562307 C20orf194Q5TEA3 1177 aa12.31□□□□□ -0.44
CDH13-205ENST00000562307 MBIPQ9NS73 344 aa12.31□□□□□ -0.44
CDH13-205ENST00000562307 CAMTA1Q9Y6Y1 1673 aa12.31□□□□□ -0.44
CDH13-205ENST00000562307 COL18A1P39060 1754 aa12.3□□□□□ -0.44
CDH13-205ENST00000562307 ZBTB7CA1YPR0 619 aa12.3□□□□□ -0.44
CDH13-205ENST00000562307 BRPF1P55201 1214 aaPredicted RBP12.3□□□□□ -0.44
CDH13-205ENST00000562307 DCTN1Q14203 1278 aa12.3□□□□□ -0.44
CDH13-205ENST00000562307 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
CDH13-205ENST00000562307 CRBNQ96SW2 442 aa12.3□□□□□ -0.44
CDH13-205ENST00000562307 ERBB3P21860 1342 aa12.3□□□□□ -0.44
CDH13-205ENST00000562307 GNAT3A8MTJ3 354 aa12.29□□□□□ -0.44
CDH13-205ENST00000562307 B4GALNT3Q6L9W6 998 aa12.29□□□□□ -0.44
CDH13-205ENST00000562307 MCM10Q7L590 875 aa12.29□□□□□ -0.44
CDH13-205ENST00000562307 USHBP1Q8N6Y0 703 aa12.29□□□□□ -0.44
CDH13-205ENST00000562307 CABLES1Q8TDN4 633 aa12.29□□□□□ -0.44
CDH13-205ENST00000562307 RTF1Q92541 710 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms