RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 NCOA3Q9Y6Q9 1424 aa21.59■■□□□ 1.05
PKD1-225ENST00000562297 C1orf167Q5SNV9 1468 aa21.59■■□□□ 1.05
PKD1-225ENST00000562297 EXOC6Q8TAG9 804 aa21.59■■□□□ 1.05
PKD1-225ENST00000562297 TRPM3Q9HCF6 1732 aaPredicted RBP21.59■■□□□ 1.05
PKD1-225ENST00000562297 XIRP1Q702N8 1843 aaKnown RBP21.58■■□□□ 1.05
PKD1-225ENST00000562297 LTN1O94822 1766 aa21.58■■□□□ 1.04
PKD1-225ENST00000562297 PAK3O75914 559 aaPredicted RBP21.58■■□□□ 1.04
PKD1-225ENST00000562297 NUTM2GQ5VZR2 741 aa21.58■■□□□ 1.04
PKD1-225ENST00000562297 IL16Q14005 1332 aa21.58■■□□□ 1.04
PKD1-225ENST00000562297 NFE2L2Q16236 605 aa21.57■■□□□ 1.04
PKD1-225ENST00000562297 MYH16Q9H6N6 1097 aa21.57■■□□□ 1.04
PKD1-225ENST00000562297 DCCP43146 1447 aa21.57■■□□□ 1.04
PKD1-225ENST00000562297 KIF24Q5T7B8 1368 aa21.57■■□□□ 1.04
PKD1-225ENST00000562297 NFAT5O94916 1531 aa21.56■■□□□ 1.04
PKD1-225ENST00000562297 PSME1Q06323 249 aa21.56■■□□□ 1.04
PKD1-225ENST00000562297 C20orf194Q5TEA3 1177 aa21.55■■□□□ 1.04
PKD1-225ENST00000562297 AEBP1Q8IUX7 1158 aa21.55■■□□□ 1.04
PKD1-225ENST00000562297 MST1RQ04912 1400 aa21.55■■□□□ 1.04
PKD1-225ENST00000562297 BCAR3O75815 825 aa21.55■■□□□ 1.04
PKD1-225ENST00000562297 NEFMP07197 916 aa21.55■■□□□ 1.04
PKD1-225ENST00000562297 FANCIQ9NVI1 1328 aa21.54■■□□□ 1.04
PKD1-225ENST00000562297 FOXO3O43524 673 aa21.53■■□□□ 1.04
PKD1-225ENST00000562297 ARHGEF10O15013 1369 aa21.53■■□□□ 1.04
PKD1-225ENST00000562297 SULT6B1Q6IMI4 303 aa21.53■■□□□ 1.04
PKD1-225ENST00000562297 PHRF1Q9P1Y6 1649 aaKnown RBP21.52■■□□□ 1.04
PKD1-225ENST00000562297 AMPHP49418 695 aa21.51■■□□□ 1.03
PKD1-225ENST00000562297 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.51■■□□□ 1.03
PKD1-225ENST00000562297 TSR2Q969E8 191 aaKnown RBP21.51■■□□□ 1.03
PKD1-225ENST00000562297 CRBNQ96SW2 442 aa21.51■■□□□ 1.03
PKD1-225ENST00000562297 KDRP35968 1356 aa21.51■■□□□ 1.03
PKD1-225ENST00000562297 CCDC136Q96JN2 1154 aa21.51■■□□□ 1.03
PKD1-225ENST00000562297 HOXC9P31274 260 aa21.5■■□□□ 1.03
PKD1-225ENST00000562297 RARSP54136 660 aaKnown RBP21.5■■□□□ 1.03
PKD1-225ENST00000562297 ALS2Q96Q42 1657 aa21.5■■□□□ 1.03
PKD1-225ENST00000562297 SLIT3O75094 1523 aa21.49■■□□□ 1.03
PKD1-225ENST00000562297 RTL1A6NKG5 1358 aa21.49■■□□□ 1.03
PKD1-225ENST00000562297 IGSF1Q8N6C5 1336 aa21.49■■□□□ 1.03
PKD1-225ENST00000562297 ATF3P18847 181 aa21.48■■□□□ 1.03
PKD1-225ENST00000562297 XPCQ01831 940 aaPredicted RBP21.48■■□□□ 1.03
PKD1-225ENST00000562297 CT47B1P0C2W7 299 aaPredicted RBP21.47■■□□□ 1.03
PKD1-225ENST00000562297 EYA1Q99502 592 aa21.46■■□□□ 1.03
PKD1-225ENST00000562297 EXOSC9Q06265 439 aaKnown RBP21.46■■□□□ 1.03
PKD1-225ENST00000562297 KRT28Q7Z3Y7 464 aa21.45■■□□□ 1.02
PKD1-225ENST00000562297 THUMPD2Q9BTF0 503 aaKnown RBP21.45■■□□□ 1.02
PKD1-225ENST00000562297 USP19O94966 1318 aa21.44■■□□□ 1.02
PKD1-225ENST00000562297 LMOD3Q0VAK6 560 aa21.44■■□□□ 1.02
PKD1-225ENST00000562297 CADPS2Q86UW7 1296 aa21.44■■□□□ 1.02
PKD1-225ENST00000562297 KCNH5Q8NCM2 988 aa21.44■■□□□ 1.02
PKD1-225ENST00000562297 MSH6P52701 1360 aa21.43■■□□□ 1.02
PKD1-225ENST00000562297 ZNF853P0CG23 659 aa21.43■■□□□ 1.02
PKD1-225ENST00000562297 CALD1Q05682 793 aaKnown RBP21.43■■□□□ 1.02
PKD1-225ENST00000562297 IP6K1Q92551 441 aa21.43■■□□□ 1.02
PKD1-225ENST00000562297 PDE3AQ14432 1141 aa21.42■■□□□ 1.02
PKD1-225ENST00000562297 FAM83GA6ND36 823 aa21.41■■□□□ 1.02
PKD1-225ENST00000562297 IFT57Q9NWB7 429 aa21.41■■□□□ 1.02
PKD1-225ENST00000562297 RGPD2P0DJD1 1756 aa21.4■■□□□ 1.02
PKD1-225ENST00000562297 GCP02774 474 aa21.4■■□□□ 1.02
PKD1-225ENST00000562297 AEBP2Q6ZN18 517 aaPredicted RBP21.4■■□□□ 1.02
PKD1-225ENST00000562297 ZNF335Q9H4Z2 1342 aaPredicted RBP21.4■■□□□ 1.02
PKD1-225ENST00000562297 MED1Q15648 1581 aaPredicted RBP21.39■■□□□ 1.02
PKD1-225ENST00000562297 GNAI1P63096 354 aa21.39■■□□□ 1.01
PKD1-225ENST00000562297 BCL2L13Q9BXK5 485 aa21.39■■□□□ 1.01
PKD1-225ENST00000562297 DCTN1Q14203 1278 aa21.38■■□□□ 1.01
PKD1-225ENST00000562297 ARHGEF25Q86VW2 580 aa21.38■■□□□ 1.01
PKD1-225ENST00000562297 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
PKD1-225ENST00000562297 PXDNQ92626 1479 aa21.37■■□□□ 1.01
PKD1-225ENST00000562297 DDX17Q92841 729 aaKnown RBP21.37■■□□□ 1.01
PKD1-225ENST00000562297 MTHFSDQ2M296 383 aaKnown RBP21.36■■□□□ 1.01
PKD1-225ENST00000562297 MBIPQ9NS73 344 aa21.36■■□□□ 1.01
PKD1-225ENST00000562297 SSH1Q8WYL5 1049 aa21.36■■□□□ 1.01
PKD1-225ENST00000562297 FRAT1Q92837 279 aaPredicted RBP21.36■■□□□ 1.01
PKD1-225ENST00000562297 LAS1LQ9Y4W2 734 aaKnown RBP21.36■■□□□ 1.01
PKD1-225ENST00000562297 CRYBG1Q9Y4K1 1723 aa21.35■■□□□ 1.01
PKD1-225ENST00000562297 NPHP3Q7Z494 1330 aa21.35■■□□□ 1.01
PKD1-225ENST00000562297 LMOD2Q6P5Q4 547 aa21.35■■□□□ 1.01
PKD1-225ENST00000562297 LTV1Q96GA3 475 aaPredicted RBP21.35■■□□□ 1.01
PKD1-225ENST00000562297 RGPD5Q99666 1765 aa21.35■■□□□ 1.01
PKD1-225ENST00000562297 PANK1Q8TE04 598 aa21.34■■□□□ 1.01
PKD1-225ENST00000562297 CANXP27824 592 aaKnown RBP21.34■■□□□ 1.01
PKD1-225ENST00000562297 TNNQ9UQP3 1299 aa21.33■■□□□ 1.01
PKD1-225ENST00000562297 LRRC37A3O60309 1634 aa21.33■■□□□ 1.01
PKD1-225ENST00000562297 CRB1P82279 1406 aa21.33■■□□□ 1
PKD1-225ENST00000562297 RLBP1P12271 317 aa21.33■■□□□ 1
PKD1-225ENST00000562297 SMC4Q9NTJ3 1288 aa21.33■■□□□ 1
PKD1-225ENST00000562297 TNS3Q68CZ2 1445 aa21.32■■□□□ 1
PKD1-225ENST00000562297 CAMTA1Q9Y6Y1 1673 aa21.32■■□□□ 1
PKD1-225ENST00000562297 MCM10Q7L590 875 aa21.32■■□□□ 1
PKD1-225ENST00000562297 ZNF428Q96B54 188 aa21.32■■□□□ 1
PKD1-225ENST00000562297 NCAPD2Q15021 1401 aa21.32■■□□□ 1
PKD1-225ENST00000562297 ALDH1L2Q3SY69 923 aa21.31■■□□□ 1
PKD1-225ENST00000562297 NBPF6Q5VWK0 638 aa21.31■■□□□ 1
PKD1-225ENST00000562297 NBPF4Q96M43 638 aa21.31■■□□□ 1
PKD1-225ENST00000562297 VAMP4O75379 141 aa21.31■■□□□ 1
PKD1-225ENST00000562297 BRINP3Q76B58 766 aa21.31■■□□□ 1
PKD1-225ENST00000562297 GAS2L2Q8NHY3 880 aa21.31■■□□□ 1
PKD1-225ENST00000562297 KDM2BQ8NHM5 1336 aa21.3■■□□□ 1
PKD1-225ENST00000562297 TSPYL6Q8N831 410 aa21.3■■□□□ 1
PKD1-225ENST00000562297 COG6Q9Y2V7 657 aa21.3■■□□□ 1
PKD1-225ENST00000562297 CHL1O00533 1208 aa21.29■■□□□ 1
PKD1-225ENST00000562297 ZKSCAN2Q63HK3 967 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms