RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
UBR1-203ENST00000562173 FCF1Q9Y324 198 aaKnown RBP9.73□□□□□ -0.85
UBR1-203ENST00000562173 EPRSP07814 1512 aaKnown RBP9.72□□□□□ -0.85
UBR1-203ENST00000562173 KIAA0586Q9BVV6 1533 aa9.72□□□□□ -0.85
UBR1-203ENST00000562173 EVA1BQ9NVM1 165 aa9.72□□□□□ -0.85
UBR1-203ENST00000562173 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
UBR1-203ENST00000562173 PTPRGP23470 1445 aa9.72□□□□□ -0.85
UBR1-203ENST00000562173 ZNF697Q5TEC3 545 aa9.71□□□□□ -0.86
UBR1-203ENST00000562173 LRRN4Q8WUT4 740 aa9.71□□□□□ -0.86
UBR1-203ENST00000562173 GJD4Q96KN9 370 aaPredicted RBP9.71□□□□□ -0.86
UBR1-203ENST00000562173 SNRKQ9NRH2 765 aa9.71□□□□□ -0.86
UBR1-203ENST00000562173 NDUFB9Q9Y6M9 179 aa9.71□□□□□ -0.86
UBR1-203ENST00000562173 IGF1RP08069 1367 aa9.71□□□□□ -0.86
UBR1-203ENST00000562173 DISP1Q96F81 1524 aa9.71□□□□□ -0.86
UBR1-203ENST00000562173 UBTFP17480 764 aaKnown RBP9.7□□□□□ -0.86
UBR1-203ENST00000562173 KCNH2Q12809 1159 aa9.7□□□□□ -0.86
UBR1-203ENST00000562173 ARMC2Q8NEN0 867 aa9.7□□□□□ -0.86
UBR1-203ENST00000562173 HMX1Q9NP08 348 aaPredicted RBP9.7□□□□□ -0.86
UBR1-203ENST00000562173 GPKOWQ92917 476 aaPredicted RBP eCLIP9.69□□□□□ -0.86
UBR1-203ENST00000562173 TRIM34Q9BYJ4 488 aa9.69□□□□□ -0.86
UBR1-203ENST00000562173 GDF9O60383 454 aa9.68□□□□□ -0.86
UBR1-203ENST00000562173 PRR20EP86478 221 aa9.68□□□□□ -0.86
UBR1-203ENST00000562173 PRR20CP86479 221 aa9.68□□□□□ -0.86
UBR1-203ENST00000562173 PRR20DP86480 221 aa9.68□□□□□ -0.86
UBR1-203ENST00000562173 PRR20BP86481 221 aa9.68□□□□□ -0.86
UBR1-203ENST00000562173 PRR20AP86496 221 aa9.68□□□□□ -0.86
UBR1-203ENST00000562173 MAP10Q9P2G4 905 aa9.68□□□□□ -0.86
UBR1-203ENST00000562173 SIGLEC1Q9BZZ2 1709 aa9.68□□□□□ -0.86
UBR1-203ENST00000562173 RAD21O60216 631 aa9.67□□□□□ -0.86
UBR1-203ENST00000562173 NBPF14Q5TI25 921 aa9.67□□□□□ -0.86
UBR1-203ENST00000562173 TRAF7Q6Q0C0 670 aa9.67□□□□□ -0.86
UBR1-203ENST00000562173 ILDR2Q71H61 639 aa9.67□□□□□ -0.86
UBR1-203ENST00000562173 ARID3CA6NKF2 412 aa9.66□□□□□ -0.86
UBR1-203ENST00000562173 CTHP32929 405 aa9.66□□□□□ -0.86
UBR1-203ENST00000562173 RPIAP49247 311 aa9.66□□□□□ -0.86
UBR1-203ENST00000562173 IQGAP2Q13576 1575 aa9.66□□□□□ -0.86
UBR1-203ENST00000562173 A6NJR5 290 aa9.65□□□□□ -0.86
UBR1-203ENST00000562173 NR6A1Q15406 480 aa9.65□□□□□ -0.86
UBR1-203ENST00000562173 CCDC24Q8N4L8 307 aa9.65□□□□□ -0.86
UBR1-203ENST00000562173 UNC93B1Q9H1C4 597 aa9.65□□□□□ -0.86
UBR1-203ENST00000562173 PKD2L1Q9P0L9 805 aa9.65□□□□□ -0.86
UBR1-203ENST00000562173 UACAQ9BZF9 1416 aa9.65□□□□□ -0.87
UBR1-203ENST00000562173 TNIKQ9UKE5 1360 aa9.64□□□□□ -0.87
UBR1-203ENST00000562173 KIAA0556O60303 1618 aa9.64□□□□□ -0.87
UBR1-203ENST00000562173 TNFRSF10AO00220 468 aa9.64□□□□□ -0.87
UBR1-203ENST00000562173 C14orf37Q86TY3 774 aa9.64□□□□□ -0.87
UBR1-203ENST00000562173 FKBPLQ9UIM3 349 aa9.64□□□□□ -0.87
UBR1-203ENST00000562173 COG6Q9Y2V7 657 aa9.64□□□□□ -0.87
UBR1-203ENST00000562173 KDM5BQ9UGL1 1544 aa9.64□□□□□ -0.87
UBR1-203ENST00000562173 PLB1Q6P1J6 1458 aa9.64□□□□□ -0.87
UBR1-203ENST00000562173 ADAMTSL3P82987 1691 aa9.64□□□□□ -0.87
UBR1-203ENST00000562173 MADDQ8WXG6 1647 aa9.64□□□□□ -0.87
UBR1-203ENST00000562173 ZBTB24O43167 697 aaPredicted RBP9.63□□□□□ -0.87
UBR1-203ENST00000562173 WWC1Q8IX03 1113 aa9.63□□□□□ -0.87
UBR1-203ENST00000562173 FBXO41Q8TF61 875 aa9.63□□□□□ -0.87
UBR1-203ENST00000562173 GPSM3Q9Y4H4 160 aa9.63□□□□□ -0.87
UBR1-203ENST00000562173 UHRF1BP1LA0JNW5 1464 aa9.62□□□□□ -0.87
UBR1-203ENST00000562173 GPR37L1O60883 481 aa9.62□□□□□ -0.87
UBR1-203ENST00000562173 RIMS1Q86UR5 1692 aaKnown RBP9.61□□□□□ -0.87
UBR1-203ENST00000562173 TRIM32Q13049 653 aa9.61□□□□□ -0.87
UBR1-203ENST00000562173 TBC1D2BQ9UPU7 963 aa9.61□□□□□ -0.87
UBR1-203ENST00000562173 CARMIL1Q5VZK9 1371 aa9.61□□□□□ -0.87
UBR1-203ENST00000562173 FRMPD1Q5SYB0 1578 aa9.6□□□□□ -0.87
UBR1-203ENST00000562173 HSPA2P54652 639 aa9.6□□□□□ -0.87
UBR1-203ENST00000562173 WNT7BP56706 349 aa9.6□□□□□ -0.87
UBR1-203ENST00000562173 PROSER2Q86WR7 435 aaPredicted RBP9.6□□□□□ -0.87
UBR1-203ENST00000562173 EPS8L1Q8TE68 723 aa9.6□□□□□ -0.87
UBR1-203ENST00000562173 CFAP43Q8NDM7 1665 aa9.6□□□□□ -0.87
UBR1-203ENST00000562173 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
UBR1-203ENST00000562173 FOXC1Q12948 553 aa9.59□□□□□ -0.87
UBR1-203ENST00000562173 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
UBR1-203ENST00000562173 PDXDC2PQ6P474 469 aa9.59□□□□□ -0.87
UBR1-203ENST00000562173 GDPD2Q9HCC8 539 aa9.59□□□□□ -0.87
UBR1-203ENST00000562173 BCORL1Q5H9F3 1711 aa9.59□□□□□ -0.87
UBR1-203ENST00000562173 PTPRMP28827 1452 aa9.59□□□□□ -0.87
UBR1-203ENST00000562173 WDR7Q9Y4E6 1490 aa9.59□□□□□ -0.87
UBR1-203ENST00000562173 WASHC4Q2M389 1173 aa9.58□□□□□ -0.88
UBR1-203ENST00000562173 ZNF511Q8NB15 262 aa9.58□□□□□ -0.88
UBR1-203ENST00000562173 ZNF592Q92610 1267 aa9.58□□□□□ -0.88
UBR1-203ENST00000562173 LMTK3Q96Q04 1460 aa9.58□□□□□ -0.88
UBR1-203ENST00000562173 KIF27Q86VH2 1401 aa9.57□□□□□ -0.88
UBR1-203ENST00000562173 DGAT1O75907 488 aa9.57□□□□□ -0.88
UBR1-203ENST00000562173 POM121Q96HA1 1249 aa9.57□□□□□ -0.88
UBR1-203ENST00000562173 ZMYND15Q9H091 742 aa9.57□□□□□ -0.88
UBR1-203ENST00000562173 TIMELESSQ9UNS1 1208 aa9.57□□□□□ -0.88
UBR1-203ENST00000562173 CTTNBP2Q8WZ74 1663 aa9.57□□□□□ -0.88
UBR1-203ENST00000562173 ABCA8O94911 1581 aa9.56□□□□□ -0.88
UBR1-203ENST00000562173 TEX14Q8IWB6 1497 aa9.56□□□□□ -0.88
UBR1-203ENST00000562173 FAM187AA6NFU0 413 aa9.56□□□□□ -0.88
UBR1-203ENST00000562173 ABL2P42684 1182 aa9.56□□□□□ -0.88
UBR1-203ENST00000562173 MYT1Q01538 1121 aa9.56□□□□□ -0.88
UBR1-203ENST00000562173 PKDCCQ504Y2 493 aa9.56□□□□□ -0.88
UBR1-203ENST00000562173 SH3BP5LQ7L8J4 393 aa9.56□□□□□ -0.88
UBR1-203ENST00000562173 UGGT2Q9NYU1 1516 aa9.56□□□□□ -0.88
UBR1-203ENST00000562173 CD109Q6YHK3 1445 aa9.56□□□□□ -0.88
UBR1-203ENST00000562173 PTK2Q05397 1052 aa9.55□□□□□ -0.88
UBR1-203ENST00000562173 BPHLQ86WA6 291 aaPredicted RBP9.55□□□□□ -0.88
UBR1-203ENST00000562173 CLUAP1Q96AJ1 413 aa9.55□□□□□ -0.88
UBR1-203ENST00000562173 TOR4AQ9NXH8 423 aa9.55□□□□□ -0.88
UBR1-203ENST00000562173 CARMIL2Q6F5E8 1435 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms