RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
BBS4-204ENST00000562084 VSIG10Q8N0Z9 540 aa23.23■■□□□ 1.31
BBS4-204ENST00000562084 CFAP44Q96MT7 982 aa23.22■■□□□ 1.31
BBS4-204ENST00000562084 EID1Q9Y6B2 187 aa23.22■■□□□ 1.31
BBS4-204ENST00000562084 ADGRB1O14514 1584 aa23.22■■□□□ 1.31
BBS4-204ENST00000562084 NCKAP5LQ9HCH0 1330 aa23.22■■□□□ 1.31
BBS4-204ENST00000562084 HDGFP51858 240 aaKnown RBP23.22■■□□□ 1.31
BBS4-204ENST00000562084 EXOSC9Q06265 439 aaKnown RBP23.22■■□□□ 1.31
BBS4-204ENST00000562084 ALDH1L2Q3SY69 923 aa23.22■■□□□ 1.31
BBS4-204ENST00000562084 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.22■■□□□ 1.31
BBS4-204ENST00000562084 SSH1Q8WYL5 1049 aa23.22■■□□□ 1.31
BBS4-204ENST00000562084 ZNF428Q96B54 188 aa23.22■■□□□ 1.31
BBS4-204ENST00000562084 PDCL3Q9H2J4 239 aa23.22■■□□□ 1.31
BBS4-204ENST00000562084 SLC12A5Q9H2X9 1139 aa23.22■■□□□ 1.31
BBS4-204ENST00000562084 STRCQ7RTU9 1775 aa23.21■■□□□ 1.31
BBS4-204ENST00000562084 TNNT2P45379 298 aaPredicted RBP23.21■■□□□ 1.31
BBS4-204ENST00000562084 CHD1LQ86WJ1 897 aa23.21■■□□□ 1.31
BBS4-204ENST00000562084 K7ELQ4 463 aaPredicted RBP23.2■■□□□ 1.3
BBS4-204ENST00000562084 HS1BP3Q53T59 392 aa23.2■■□□□ 1.3
BBS4-204ENST00000562084 GAS2L3Q86XJ1 694 aa23.2■■□□□ 1.3
BBS4-204ENST00000562084 ZSCAN30Q86W11 494 aa23.19■■□□□ 1.3
BBS4-204ENST00000562084 GCC1Q96CN9 775 aa23.19■■□□□ 1.3
BBS4-204ENST00000562084 ZMYND15Q9H091 742 aa23.19■■□□□ 1.3
BBS4-204ENST00000562084 C14orf93Q9H972 538 aaKnown RBP23.19■■□□□ 1.3
BBS4-204ENST00000562084 VGFO15240 615 aaPredicted RBP23.19■■□□□ 1.3
BBS4-204ENST00000562084 BRPF1P55201 1214 aaPredicted RBP23.19■■□□□ 1.3
BBS4-204ENST00000562084 KLHL40Q2TBA0 621 aa23.19■■□□□ 1.3
BBS4-204ENST00000562084 MED14O60244 1454 aa23.18■■□□□ 1.3
BBS4-204ENST00000562084 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
BBS4-204ENST00000562084 NOB1Q9ULX3 412 aaKnown RBP23.18■■□□□ 1.3
BBS4-204ENST00000562084 TMPOP42166 694 aaKnown RBP23.17■■□□□ 1.3
BBS4-204ENST00000562084 TMEM57Q8N5G2 664 aa23.17■■□□□ 1.3
BBS4-204ENST00000562084 PLEKHF1Q96S99 279 aa23.17■■□□□ 1.3
BBS4-204ENST00000562084 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.17■■□□□ 1.3
BBS4-204ENST00000562084 NASPP49321 788 aaPredicted RBP23.16■■□□□ 1.3
BBS4-204ENST00000562084 TSR2Q969E8 191 aaKnown RBP23.16■■□□□ 1.3
BBS4-204ENST00000562084 KIF2CQ99661 725 aa23.16■■□□□ 1.3
BBS4-204ENST00000562084 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
BBS4-204ENST00000562084 OFD1O75665 1012 aa23.15■■□□□ 1.3
BBS4-204ENST00000562084 COL3A1P02461 1466 aaPredicted RBP23.15■■□□□ 1.3
BBS4-204ENST00000562084 TRIM35Q9UPQ4 493 aa23.14■■□□□ 1.29
BBS4-204ENST00000562084 PLEKHG1Q9ULL1 1385 aa23.13■■□□□ 1.29
BBS4-204ENST00000562084 ZNF445P59923 1031 aa23.13■■□□□ 1.29
BBS4-204ENST00000562084 MAP7D2Q96T17 732 aa23.12■■□□□ 1.29
BBS4-204ENST00000562084 TRAK1Q9UPV9 953 aa23.12■■□□□ 1.29
BBS4-204ENST00000562084 NPHP4O75161 1426 aaPredicted RBP23.11■■□□□ 1.29
BBS4-204ENST00000562084 PPIP5K1Q6PFW1 1433 aa23.11■■□□□ 1.29
BBS4-204ENST00000562084 MSNP26038 577 aaKnown RBP23.11■■□□□ 1.29
BBS4-204ENST00000562084 LNPKQ9C0E8 428 aa23.11■■□□□ 1.29
BBS4-204ENST00000562084 ANKRD26Q9UPS8 1709 aa23.11■■□□□ 1.29
BBS4-204ENST00000562084 PIK3R4Q99570 1358 aa23.11■■□□□ 1.29
BBS4-204ENST00000562084 KIAA1211Q6ZU35 1233 aa23.11■■□□□ 1.29
BBS4-204ENST00000562084 NRXN3Q9Y4C0 1643 aa23.1■■□□□ 1.29
BBS4-204ENST00000562084 NUCB2P80303 420 aa23.1■■□□□ 1.29
BBS4-204ENST00000562084 ARHGAP45Q92619 1136 aa23.1■■□□□ 1.29
BBS4-204ENST00000562084 TULP4Q9NRJ4 1543 aa23.09■■□□□ 1.29
BBS4-204ENST00000562084 BAG4O95429 457 aaKnown RBP23.08■■□□□ 1.29
BBS4-204ENST00000562084 DDX49Q9Y6V7 483 aaKnown RBP23.08■■□□□ 1.29
BBS4-204ENST00000562084 ARHGEF28Q8N1W1 1705 aaKnown RBP23.07■■□□□ 1.28
BBS4-204ENST00000562084 CDC45O75419 566 aa23.07■■□□□ 1.28
BBS4-204ENST00000562084 RABEP1Q15276 862 aa23.07■■□□□ 1.28
BBS4-204ENST00000562084 TBC1D9Q6ZT07 1266 aa23.07■■□□□ 1.28
BBS4-204ENST00000562084 SLC26A8Q96RN1 970 aa23.07■■□□□ 1.28
BBS4-204ENST00000562084 ADAMTS13Q76LX8 1427 aa23.07■■□□□ 1.28
BBS4-204ENST00000562084 CDC42BPGQ6DT37 1551 aa23.06■■□□□ 1.28
BBS4-204ENST00000562084 PTCH1Q13635 1447 aa23.06■■□□□ 1.28
BBS4-204ENST00000562084 SSFA2P28290 1259 aa23.05■■□□□ 1.28
BBS4-204ENST00000562084 ALKQ9UM73 1620 aa23.05■■□□□ 1.28
BBS4-204ENST00000562084 MCM5P33992 734 aa23.04■■□□□ 1.28
BBS4-204ENST00000562084 SETD1AO15047 1707 aaKnown RBP23.03■■□□□ 1.28
BBS4-204ENST00000562084 ZNF500O60304 480 aaPredicted RBP23.03■■□□□ 1.28
BBS4-204ENST00000562084 RIPK4P57078 832 aa23.03■■□□□ 1.28
BBS4-204ENST00000562084 ANKRD45Q5TZF3 282 aa23.03■■□□□ 1.28
BBS4-204ENST00000562084 GAS2L2Q8NHY3 880 aa23.03■■□□□ 1.28
BBS4-204ENST00000562084 CWC22Q9HCG8 908 aaKnown RBP23.03■■□□□ 1.28
BBS4-204ENST00000562084 U2SURPO15042 1029 aaKnown RBP23.02■■□□□ 1.28
BBS4-204ENST00000562084 ZBTB7BO15156 539 aaPredicted RBP23.02■■□□□ 1.28
BBS4-204ENST00000562084 CD2BP2O95400 341 aaKnown RBP23.02■■□□□ 1.28
BBS4-204ENST00000562084 CALD1Q05682 793 aaKnown RBP23.02■■□□□ 1.28
BBS4-204ENST00000562084 NOL7Q9UMY1 257 aaKnown RBP23.02■■□□□ 1.28
BBS4-204ENST00000562084 TBX22Q9Y458 520 aa23.02■■□□□ 1.28
BBS4-204ENST00000562084 MTERF4Q7Z6M4 381 aaKnown RBP23.01■■□□□ 1.27
BBS4-204ENST00000562084 PDLIM2Q96JY6 352 aa23.01■■□□□ 1.27
BBS4-204ENST00000562084 KIF24Q5T7B8 1368 aa23.01■■□□□ 1.27
BBS4-204ENST00000562084 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
BBS4-204ENST00000562084 DIP2AQ14689 1571 aa23■■□□□ 1.27
BBS4-204ENST00000562084 CYP2E1P05181 493 aaPredicted RBP23■■□□□ 1.27
BBS4-204ENST00000562084 CSPP1Q1MSJ5 1256 aa23■■□□□ 1.27
BBS4-204ENST00000562084 FCHSD2O94868 740 aa22.98■■□□□ 1.27
BBS4-204ENST00000562084 A0A1W2PP64 1363 aa22.98■■□□□ 1.27
BBS4-204ENST00000562084 METP08581 1390 aa22.98■■□□□ 1.27
BBS4-204ENST00000562084 DIAPH1O60610 1272 aaKnown RBP22.97■■□□□ 1.27
BBS4-204ENST00000562084 TMEM132EQ6IEE7 984 aa22.97■■□□□ 1.27
BBS4-204ENST00000562084 ATAD2Q6PL18 1390 aa22.96■■□□□ 1.27
BBS4-204ENST00000562084 ZSCAN23Q3MJ62 389 aa22.96■■□□□ 1.27
BBS4-204ENST00000562084 ABCC4O15439 1325 aa22.95■■□□□ 1.27
BBS4-204ENST00000562084 FOXD4L1Q9NU39 408 aa22.95■■□□□ 1.26
BBS4-204ENST00000562084 LMBRD1Q9NUN5 540 aa22.95■■□□□ 1.26
BBS4-204ENST00000562084 MRPL50Q8N5N7 158 aaKnown RBP22.94■■□□□ 1.26
BBS4-204ENST00000562084 TERF2IPQ9NYB0 399 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms