RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 NFAT5O94916 1531 aa13.24□□□□□ -0.29
NSMCE1-203ENST00000562039 EDC4Q6P2E9 1401 aaKnown RBP13.24□□□□□ -0.29
NSMCE1-203ENST00000562039 TRIM37O94972 964 aa13.24□□□□□ -0.29
NSMCE1-203ENST00000562039 CCDC125Q86Z20 511 aa13.24□□□□□ -0.29
NSMCE1-203ENST00000562039 LTV1Q96GA3 475 aaPredicted RBP13.24□□□□□ -0.29
NSMCE1-203ENST00000562039 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
NSMCE1-203ENST00000562039 CRB1P82279 1406 aa13.23□□□□□ -0.29
NSMCE1-203ENST00000562039 USP31Q70CQ4 1352 aa13.23□□□□□ -0.29
NSMCE1-203ENST00000562039 EN1Q05925 392 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-203ENST00000562039 BARGINQ6ZT62 677 aa13.23□□□□□ -0.29
NSMCE1-203ENST00000562039 PUS7Q96PZ0 661 aaKnown RBP13.23□□□□□ -0.29
NSMCE1-203ENST00000562039 GGNBP2Q9H3C7 697 aa13.23□□□□□ -0.29
NSMCE1-203ENST00000562039 WDR17Q8IZU2 1322 aa13.22□□□□□ -0.29
NSMCE1-203ENST00000562039 HSPA5P11021 654 aaKnown RBP13.22□□□□□ -0.29
NSMCE1-203ENST00000562039 COG3Q96JB2 828 aa13.21□□□□□ -0.29
NSMCE1-203ENST00000562039 NLRP2Q9NX02 1062 aa13.21□□□□□ -0.29
NSMCE1-203ENST00000562039 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
NSMCE1-203ENST00000562039 BAG6P46379 1132 aa13.2□□□□□ -0.3
NSMCE1-203ENST00000562039 OVOS2A0A0J9YW53 1432 aa13.2□□□□□ -0.3
NSMCE1-203ENST00000562039 OVOS2Q6IE36 1432 aa13.2□□□□□ -0.3
NSMCE1-203ENST00000562039 LTN1O94822 1766 aa13.2□□□□□ -0.3
NSMCE1-203ENST00000562039 PSDA5PKW4 1024 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-203ENST00000562039 SLC24A1O60721 1099 aa13.19□□□□□ -0.3
NSMCE1-203ENST00000562039 RRS1Q15050 365 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-203ENST00000562039 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-203ENST00000562039 DDB1Q16531 1140 aa13.19□□□□□ -0.3
NSMCE1-203ENST00000562039 ANKRD24Q8TF21 1146 aa13.19□□□□□ -0.3
NSMCE1-203ENST00000562039 THRAP3Q9Y2W1 955 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-203ENST00000562039 NINLQ9Y2I6 1382 aa13.19□□□□□ -0.3
NSMCE1-203ENST00000562039 APBA3O96018 575 aa13.18□□□□□ -0.3
NSMCE1-203ENST00000562039 CDCA8Q53HL2 280 aa13.18□□□□□ -0.3
NSMCE1-203ENST00000562039 FAM196AQ6ZSG2 479 aa13.18□□□□□ -0.3
NSMCE1-203ENST00000562039 CARD14Q9BXL6 1004 aa13.18□□□□□ -0.3
NSMCE1-203ENST00000562039 FYB1O15117 783 aa13.17□□□□□ -0.3
NSMCE1-203ENST00000562039 AMPHP49418 695 aa13.17□□□□□ -0.3
NSMCE1-203ENST00000562039 EIF4G2P78344 907 aaKnown RBP eCLIP13.17□□□□□ -0.3
NSMCE1-203ENST00000562039 PTF1AQ7RTS3 328 aa13.17□□□□□ -0.3
NSMCE1-203ENST00000562039 CARD10Q9BWT7 1032 aa13.17□□□□□ -0.3
NSMCE1-203ENST00000562039 MAP3K19Q56UN5 1328 aa13.16□□□□□ -0.3
NSMCE1-203ENST00000562039 MARCH10Q8NA82 808 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-203ENST00000562039 LRRC37A3O60309 1634 aa13.16□□□□□ -0.3
NSMCE1-203ENST00000562039 RGPD1P0DJD0 1748 aa13.16□□□□□ -0.3
NSMCE1-203ENST00000562039 ERBB3P21860 1342 aa13.15□□□□□ -0.3
NSMCE1-203ENST00000562039 MYOM1P52179 1685 aa13.15□□□□□ -0.3
NSMCE1-203ENST00000562039 USP54Q70EL1 1684 aa13.15□□□□□ -0.3
NSMCE1-203ENST00000562039 NSD3Q9BZ95 1437 aa13.15□□□□□ -0.3
NSMCE1-203ENST00000562039 PARP4Q9UKK3 1724 aaKnown RBP13.15□□□□□ -0.3
NSMCE1-203ENST00000562039 TNS1Q9HBL0 1735 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-203ENST00000562039 EXOC5O00471 708 aa13.14□□□□□ -0.31
NSMCE1-203ENST00000562039 HOXC9P31274 260 aa13.14□□□□□ -0.31
NSMCE1-203ENST00000562039 IP6K1Q92551 441 aa13.14□□□□□ -0.31
NSMCE1-203ENST00000562039 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
NSMCE1-203ENST00000562039 C11orf95C9JLR9 678 aaPredicted RBP13.13□□□□□ -0.31
NSMCE1-203ENST00000562039 USHBP1Q8N6Y0 703 aa13.13□□□□□ -0.31
NSMCE1-203ENST00000562039 ACSBG1Q96GR2 724 aa13.13□□□□□ -0.31
NSMCE1-203ENST00000562039 DISP2A7MBM2 1401 aa13.13□□□□□ -0.31
NSMCE1-203ENST00000562039 CCDC7Q96M83 1385 aa13.12□□□□□ -0.31
NSMCE1-203ENST00000562039 KIF20BQ96Q89 1820 aa13.12□□□□□ -0.31
NSMCE1-203ENST00000562039 PPM1GO15355 546 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-203ENST00000562039 TNNT2P45379 298 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-203ENST00000562039 R3HDM1Q15032 1099 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-203ENST00000562039 CAMKK2Q96RR4 588 aa13.12□□□□□ -0.31
NSMCE1-203ENST00000562039 OVOS2A0A0G2JMS6 1433 aa13.12□□□□□ -0.31
NSMCE1-203ENST00000562039 IL2RBP14784 551 aa13.11□□□□□ -0.31
NSMCE1-203ENST00000562039 EMILIN1Q9Y6C2 1016 aa13.11□□□□□ -0.31
NSMCE1-203ENST00000562039 RGPD2P0DJD1 1756 aa13.11□□□□□ -0.31
NSMCE1-203ENST00000562039 KAT6BQ8WYB5 2073 aa13.1□□□□□ -0.31
NSMCE1-203ENST00000562039 KCNQ2O43526 872 aa13.1□□□□□ -0.31
NSMCE1-203ENST00000562039 HSP90AB2PQ58FF8 381 aa13.1□□□□□ -0.31
NSMCE1-203ENST00000562039 CDCA7Q9BWT1 371 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-203ENST00000562039 PANK3Q9H999 370 aa13.1□□□□□ -0.31
NSMCE1-203ENST00000562039 ABCC6O95255 1503 aa13.09□□□□□ -0.31
NSMCE1-203ENST00000562039 DDX54Q8TDD1 881 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-203ENST00000562039 PEAK1Q9H792 1746 aa13.09□□□□□ -0.31
NSMCE1-203ENST00000562039 CNGB1Q14028 1251 aaPredicted RBP13.08□□□□□ -0.32
NSMCE1-203ENST00000562039 NBPF6Q5VWK0 638 aa13.08□□□□□ -0.32
NSMCE1-203ENST00000562039 NBPF4Q96M43 638 aa13.08□□□□□ -0.32
NSMCE1-203ENST00000562039 TNS2Q63HR2 1409 aa13.07□□□□□ -0.32
NSMCE1-203ENST00000562039 SBF2Q86WG5 1849 aa13.07□□□□□ -0.32
NSMCE1-203ENST00000562039 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-203ENST00000562039 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
NSMCE1-203ENST00000562039 RTL1A6NKG5 1358 aa13.04□□□□□ -0.32
NSMCE1-203ENST00000562039 MEGF6O75095 1541 aa13.03□□□□□ -0.32
NSMCE1-203ENST00000562039 NUP188Q5SRE5 1749 aa13.03□□□□□ -0.32
NSMCE1-203ENST00000562039 SYTL4Q96C24 671 aaPredicted RBP13.03□□□□□ -0.32
NSMCE1-203ENST00000562039 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
NSMCE1-203ENST00000562039 FLT4P35916 1363 aa13.03□□□□□ -0.32
NSMCE1-203ENST00000562039 SMG6Q86US8 1419 aaKnown RBP13.03□□□□□ -0.32
NSMCE1-203ENST00000562039 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.32
NSMCE1-203ENST00000562039 NBPF14Q5TI25 921 aa13.02□□□□□ -0.33
NSMCE1-203ENST00000562039 PROM2Q8N271 834 aa13.02□□□□□ -0.33
NSMCE1-203ENST00000562039 ZCRB1Q8TBF4 217 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-203ENST00000562039 ANO8Q9HCE9 1232 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-203ENST00000562039 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
NSMCE1-203ENST00000562039 INSRP06213 1382 aa13.02□□□□□ -0.33
NSMCE1-203ENST00000562039 SRCAPQ6ZRS2 3230 aa13.02□□□□□ -0.33
NSMCE1-203ENST00000562039 RREB1Q92766 1687 aa13.02□□□□□ -0.33
NSMCE1-203ENST00000562039 MAP2P11137 1827 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-203ENST00000562039 TATP17735 454 aaPredicted RBP13.01□□□□□ -0.33
NSMCE1-203ENST00000562039 TXNRD1Q16881 649 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms