RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ZFP42Q96MM3 310 aa5.84□□□□□ -1.47
SPG11-225ENST00000561391 NUDT12Q9BQG2 462 aa5.84□□□□□ -1.47
SPG11-225ENST00000561391 ABCA5Q8WWZ7 1642 aa5.84□□□□□ -1.47
SPG11-225ENST00000561391 MAP3K4Q9Y6R4 1608 aa5.84□□□□□ -1.47
SPG11-225ENST00000561391 ABCA10Q8WWZ4 1543 aa5.84□□□□□ -1.48
SPG11-225ENST00000561391 BRPF1P55201 1214 aaPredicted RBP5.83□□□□□ -1.48
SPG11-225ENST00000561391 MADDQ8WXG6 1647 aa5.83□□□□□ -1.48
SPG11-225ENST00000561391 MED1Q15648 1581 aaPredicted RBP5.83□□□□□ -1.48
SPG11-225ENST00000561391 ABCC2Q92887 1545 aa5.83□□□□□ -1.48
SPG11-225ENST00000561391 YEATS2Q9ULM3 1422 aa5.82□□□□□ -1.48
SPG11-225ENST00000561391 HOXA2O43364 376 aa5.82□□□□□ -1.48
SPG11-225ENST00000561391 GDF11O95390 407 aa5.82□□□□□ -1.48
SPG11-225ENST00000561391 RAPGEF3O95398 923 aa5.82□□□□□ -1.48
SPG11-225ENST00000561391 PIP4K2BP78356 416 aa5.82□□□□□ -1.48
SPG11-225ENST00000561391 PDE4DQ08499 809 aa5.82□□□□□ -1.48
SPG11-225ENST00000561391 SCARF1Q14162 830 aa5.82□□□□□ -1.48
SPG11-225ENST00000561391 PSMG3-AS1Q96PY0 264 aa5.82□□□□□ -1.48
SPG11-225ENST00000561391 KRTAP9-2Q9BYQ4 174 aa5.82□□□□□ -1.48
SPG11-225ENST00000561391 CD109Q6YHK3 1445 aa5.82□□□□□ -1.48
SPG11-225ENST00000561391 SIAH2O43255 324 aa5.81□□□□□ -1.48
SPG11-225ENST00000561391 GUCA2AQ02747 115 aa5.81□□□□□ -1.48
SPG11-225ENST00000561391 MLECQ14165 292 aa5.81□□□□□ -1.48
SPG11-225ENST00000561391 GPBP1L1Q9HC44 474 aaPredicted RBP5.81□□□□□ -1.48
SPG11-225ENST00000561391 TLL2Q9Y6L7 1015 aa5.81□□□□□ -1.48
SPG11-225ENST00000561391 CUL7Q14999 1698 aa5.81□□□□□ -1.48
SPG11-225ENST00000561391 RIMS1Q86UR5 1692 aaKnown RBP5.81□□□□□ -1.48
SPG11-225ENST00000561391 KRTAP9-6A0A140TA67 174 aa5.8□□□□□ -1.48
SPG11-225ENST00000561391 CEBPAP49715 358 aaPredicted RBP5.8□□□□□ -1.48
SPG11-225ENST00000561391 GSK3AP49840 483 aa5.8□□□□□ -1.48
SPG11-225ENST00000561391 TTLL12Q14166 644 aaPredicted RBP5.8□□□□□ -1.48
SPG11-225ENST00000561391 MRPL14Q6P1L8 145 aaKnown RBP5.8□□□□□ -1.48
SPG11-225ENST00000561391 KRTAP1-3Q8IUG1 177 aa5.8□□□□□ -1.48
SPG11-225ENST00000561391 SYMPKQ92797 1274 aaKnown RBP5.8□□□□□ -1.48
SPG11-225ENST00000561391 PURBQ96QR8 312 aaKnown RBP5.8□□□□□ -1.48
SPG11-225ENST00000561391 BCORL1Q5H9F3 1711 aa5.79□□□□□ -1.48
SPG11-225ENST00000561391 PLEKHG3A1L390 1219 aa5.79□□□□□ -1.48
SPG11-225ENST00000561391 CCNYL3P0C7X3 344 aa5.79□□□□□ -1.48
SPG11-225ENST00000561391 SH3BP2P78314 561 aa5.79□□□□□ -1.48
SPG11-225ENST00000561391 MDM2Q00987 491 aaPredicted RBP5.79□□□□□ -1.48
SPG11-225ENST00000561391 NNTQ13423 1086 aa5.79□□□□□ -1.48
SPG11-225ENST00000561391 LINC01559Q495D7 138 aa5.79□□□□□ -1.48
SPG11-225ENST00000561391 PTCRAQ6ISU1 281 aaPredicted RBP5.79□□□□□ -1.48
SPG11-225ENST00000561391 RETREG3Q86VR2 466 aa5.79□□□□□ -1.48
SPG11-225ENST00000561391 KIAA0586Q9BVV6 1533 aa5.79□□□□□ -1.48
SPG11-225ENST00000561391 SOBPA7XYQ1 873 aa5.78□□□□□ -1.48
SPG11-225ENST00000561391 ADH1CP00326 375 aa5.78□□□□□ -1.48
SPG11-225ENST00000561391 KDM4CQ9H3R0 1056 aa5.78□□□□□ -1.48
SPG11-225ENST00000561391 RGS17Q9UGC6 210 aaPredicted RBP5.78□□□□□ -1.48
SPG11-225ENST00000561391 STRCQ7RTU9 1775 aa5.78□□□□□ -1.48
SPG11-225ENST00000561391 LTBP4Q8N2S1 1624 aa5.77□□□□□ -1.48
SPG11-225ENST00000561391 C6orf229H3BNL8 230 aa5.77□□□□□ -1.49
SPG11-225ENST00000561391 MS4A1P11836 297 aa5.77□□□□□ -1.49
SPG11-225ENST00000561391 WDR4P57081 412 aaKnown RBP5.77□□□□□ -1.49
SPG11-225ENST00000561391 RASSF7Q02833 373 aa5.77□□□□□ -1.49
SPG11-225ENST00000561391 NUTM1Q86Y26 1132 aa5.77□□□□□ -1.49
SPG11-225ENST00000561391 IL27Q8NEV9 243 aa5.77□□□□□ -1.49
SPG11-225ENST00000561391 RUSC2Q8N2Y8 1516 aa5.77□□□□□ -1.49
SPG11-225ENST00000561391 TNIKQ9UKE5 1360 aa5.77□□□□□ -1.49
SPG11-225ENST00000561391 UACAQ9BZF9 1416 aa5.76□□□□□ -1.49
SPG11-225ENST00000561391 MAN1A2O60476 641 aa5.76□□□□□ -1.49
SPG11-225ENST00000561391 VSIG8P0DPA2 414 aa5.76□□□□□ -1.49
SPG11-225ENST00000561391 AMHR2Q16671 573 aa5.76□□□□□ -1.49
SPG11-225ENST00000561391 GPAT2Q6NUI2 795 aa5.76□□□□□ -1.49
SPG11-225ENST00000561391 UNC93B1Q9H1C4 597 aa5.76□□□□□ -1.49
SPG11-225ENST00000561391 PTPRTO14522 1441 aa5.75□□□□□ -1.49
SPG11-225ENST00000561391 MAGI3Q5TCQ9 1506 aa5.75□□□□□ -1.49
SPG11-225ENST00000561391 RNF225M0QZC1 329 aaPredicted RBP5.75□□□□□ -1.49
SPG11-225ENST00000561391 PARP9Q8IXQ6 854 aa5.75□□□□□ -1.49
SPG11-225ENST00000561391 IQSEC2Q5JU85 1478 aa5.75□□□□□ -1.49
SPG11-225ENST00000561391 ZNF335Q9H4Z2 1342 aaPredicted RBP5.74□□□□□ -1.49
SPG11-225ENST00000561391 FDX1P10109 184 aa5.74□□□□□ -1.49
SPG11-225ENST00000561391 TIMP2P16035 220 aa5.74□□□□□ -1.49
SPG11-225ENST00000561391 VARSP26640 1264 aaKnown RBP5.74□□□□□ -1.49
SPG11-225ENST00000561391 CLCN1P35523 988 aa5.74□□□□□ -1.49
SPG11-225ENST00000561391 C6orf118Q5T5N4 469 aa5.74□□□□□ -1.49
SPG11-225ENST00000561391 POTEAQ6S8J7 498 aa5.74□□□□□ -1.49
SPG11-225ENST00000561391 GIGYF2Q6Y7W6 1299 aaKnown RBP5.74□□□□□ -1.49
SPG11-225ENST00000561391 BAP1Q92560 729 aa5.74□□□□□ -1.49
SPG11-225ENST00000561391 UHRF1BP1LA0JNW5 1464 aa5.74□□□□□ -1.49
SPG11-225ENST00000561391 ARAP3Q8WWN8 1544 aa5.74□□□□□ -1.49
SPG11-225ENST00000561391 WRNQ14191 1432 aaPredicted RBP eCLIP5.74□□□□□ -1.49
SPG11-225ENST00000561391 TOM1O60784 492 aa5.73□□□□□ -1.49
SPG11-225ENST00000561391 PTPRNQ16849 979 aa5.73□□□□□ -1.49
SPG11-225ENST00000561391 TMEM132AQ24JP5 1023 aa5.73□□□□□ -1.49
SPG11-225ENST00000561391 ZNF511Q8NB15 262 aa5.73□□□□□ -1.49
SPG11-225ENST00000561391 FAM117AQ9C073 453 aa5.73□□□□□ -1.49
SPG11-225ENST00000561391 GPCPD1Q9NPB8 672 aa5.73□□□□□ -1.49
SPG11-225ENST00000561391 ERICH3Q5RHP9 1530 aa5.73□□□□□ -1.49
SPG11-225ENST00000561391 KDM5BQ9UGL1 1544 aa5.73□□□□□ -1.49
SPG11-225ENST00000561391 CARMIL2Q6F5E8 1435 aa5.73□□□□□ -1.49
SPG11-225ENST00000561391 WDR7Q9Y4E6 1490 aa5.72□□□□□ -1.49
SPG11-225ENST00000561391 UPP2O95045 317 aa5.72□□□□□ -1.49
SPG11-225ENST00000561391 IGHA1P01876 353 aa5.72□□□□□ -1.49
SPG11-225ENST00000561391 SSTR3P32745 418 aaPredicted RBP5.72□□□□□ -1.49
SPG11-225ENST00000561391 ARID5BQ14865 1188 aa5.72□□□□□ -1.49
SPG11-225ENST00000561391 CFAP43Q8NDM7 1665 aa5.72□□□□□ -1.49
SPG11-225ENST00000561391 ZCCHC11Q5TAX3 1644 aaKnown RBP5.71□□□□□ -1.5
SPG11-225ENST00000561391 ZIC2O95409 532 aaPredicted RBP5.71□□□□□ -1.5
SPG11-225ENST00000561391 BMP2P12643 396 aa5.71□□□□□ -1.5
SPG11-225ENST00000561391 KCNH2Q12809 1159 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms