RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 SEC24BO95487 1268 aa10.65□□□□□ -0.7
GABPB1-211ENST00000561010 PMFBP1Q8TBY8 1022 aa10.65□□□□□ -0.7
GABPB1-211ENST00000561010 PHF8Q9UPP1 1060 aa10.65□□□□□ -0.7
GABPB1-211ENST00000561010 TNS3Q68CZ2 1445 aa10.65□□□□□ -0.7
GABPB1-211ENST00000561010 ST18O60284 1047 aa10.64□□□□□ -0.71
GABPB1-211ENST00000561010 IRX5P78411 483 aaPredicted RBP10.64□□□□□ -0.71
GABPB1-211ENST00000561010 LMOD2Q6P5Q4 547 aa10.64□□□□□ -0.71
GABPB1-211ENST00000561010 CDAN1Q8IWY9 1227 aa10.64□□□□□ -0.71
GABPB1-211ENST00000561010 DCAF11Q8TEB1 546 aa10.64□□□□□ -0.71
GABPB1-211ENST00000561010 BBXQ8WY36 941 aaPredicted RBP10.64□□□□□ -0.71
GABPB1-211ENST00000561010 POGKQ9P215 609 aa10.64□□□□□ -0.71
GABPB1-211ENST00000561010 SLIT2O94813 1529 aa10.63□□□□□ -0.71
GABPB1-211ENST00000561010 RALGAPBQ86X10 1494 aa10.63□□□□□ -0.71
GABPB1-211ENST00000561010 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.63□□□□□ -0.71
GABPB1-211ENST00000561010 ATAD2Q6PL18 1390 aa10.63□□□□□ -0.71
GABPB1-211ENST00000561010 TOPAZ1Q8N9V7 1692 aa10.63□□□□□ -0.71
GABPB1-211ENST00000561010 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
GABPB1-211ENST00000561010 PRR36Q9H6K5 1346 aa10.62□□□□□ -0.71
GABPB1-211ENST00000561010 KIAA1210Q9ULL0 1709 aa10.62□□□□□ -0.71
GABPB1-211ENST00000561010 SIRT1Q96EB6 747 aa10.62□□□□□ -0.71
GABPB1-211ENST00000561010 STK24Q9Y6E0 443 aa10.62□□□□□ -0.71
GABPB1-211ENST00000561010 TULP4Q9NRJ4 1543 aa10.62□□□□□ -0.71
GABPB1-211ENST00000561010 PSEN1P49768 467 aa10.61□□□□□ -0.71
GABPB1-211ENST00000561010 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
GABPB1-211ENST00000561010 PSME1Q06323 249 aa10.61□□□□□ -0.71
GABPB1-211ENST00000561010 GJD4Q96KN9 370 aaPredicted RBP10.61□□□□□ -0.71
GABPB1-211ENST00000561010 TMEM106CQ9BVX2 250 aa10.61□□□□□ -0.71
GABPB1-211ENST00000561010 BCL11BQ9C0K0 894 aaPredicted RBP10.61□□□□□ -0.71
GABPB1-211ENST00000561010 COL14A1Q05707 1796 aaKnown RBP10.61□□□□□ -0.71
GABPB1-211ENST00000561010 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
GABPB1-211ENST00000561010 ANKARQ7Z5J8 1434 aa10.6□□□□□ -0.71
GABPB1-211ENST00000561010 UNC5CLQ8IV45 518 aa10.6□□□□□ -0.71
GABPB1-211ENST00000561010 SLAIN1Q8ND83 568 aa10.59□□□□□ -0.71
GABPB1-211ENST00000561010 SBNO1A3KN83 1393 aa10.59□□□□□ -0.71
GABPB1-211ENST00000561010 CCDC9Q9Y3X0 531 aaKnown RBP10.58□□□□□ -0.72
GABPB1-211ENST00000561010 ACIN1Q9UKV3 1341 aaKnown RBP10.58□□□□□ -0.72
GABPB1-211ENST00000561010 RGPD5Q99666 1765 aa10.57□□□□□ -0.72
GABPB1-211ENST00000561010 ATP7BP35670 1465 aa10.57□□□□□ -0.72
GABPB1-211ENST00000561010 FAM83GA6ND36 823 aa10.57□□□□□ -0.72
GABPB1-211ENST00000561010 WASLO00401 505 aaPredicted RBP10.57□□□□□ -0.72
GABPB1-211ENST00000561010 ARHGEF10O15013 1369 aa10.56□□□□□ -0.72
GABPB1-211ENST00000561010 PLCB2Q00722 1185 aa10.56□□□□□ -0.72
GABPB1-211ENST00000561010 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
GABPB1-211ENST00000561010 NBPF1Q3BBV0 1214 aa10.55□□□□□ -0.72
GABPB1-211ENST00000561010 NUTM2GQ5VZR2 741 aa10.55□□□□□ -0.72
GABPB1-211ENST00000561010 SEPT12Q8IYM1 358 aa10.55□□□□□ -0.72
GABPB1-211ENST00000561010 RGPD1P0DJD0 1748 aa10.55□□□□□ -0.72
GABPB1-211ENST00000561010 SRCAPQ6ZRS2 3230 aa10.54□□□□□ -0.72
GABPB1-211ENST00000561010 GPRASP1Q5JY77 1395 aa10.54□□□□□ -0.72
GABPB1-211ENST00000561010 THSD7AQ9UPZ6 1657 aa10.54□□□□□ -0.72
GABPB1-211ENST00000561010 VPS72Q15906 364 aa10.54□□□□□ -0.72
GABPB1-211ENST00000561010 DEFB132Q7Z7B7 95 aa10.54□□□□□ -0.72
GABPB1-211ENST00000561010 NGDNQ8NEJ9 315 aaKnown RBP10.54□□□□□ -0.72
GABPB1-211ENST00000561010 TRPM1Q7Z4N2 1603 aa10.54□□□□□ -0.72
GABPB1-211ENST00000561010 NRKQ7Z2Y5 1582 aa10.53□□□□□ -0.72
GABPB1-211ENST00000561010 A0A0G2JS52 829 aa10.53□□□□□ -0.72
GABPB1-211ENST00000561010 MYT1Q01538 1121 aa10.53□□□□□ -0.72
GABPB1-211ENST00000561010 FAM182BQ5T319 152 aa10.53□□□□□ -0.72
GABPB1-211ENST00000561010 NUDT16Q96DE0 195 aaKnown RBP10.53□□□□□ -0.72
GABPB1-211ENST00000561010 CDK19Q9BWU1 502 aa10.53□□□□□ -0.72
GABPB1-211ENST00000561010 BTG4Q9NY30 223 aa10.53□□□□□ -0.72
GABPB1-211ENST00000561010 EIF3AQ14152 1382 aaKnown RBP10.52□□□□□ -0.72
GABPB1-211ENST00000561010 AKAP12Q02952 1782 aa10.52□□□□□ -0.72
GABPB1-211ENST00000561010 SLC24A1O60721 1099 aa10.52□□□□□ -0.73
GABPB1-211ENST00000561010 CHRNA2Q15822 529 aa10.52□□□□□ -0.73
GABPB1-211ENST00000561010 FAM98CQ17RN3 349 aaKnown RBP10.52□□□□□ -0.73
GABPB1-211ENST00000561010 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
GABPB1-211ENST00000561010 KAT6BQ8WYB5 2073 aa10.51□□□□□ -0.73
GABPB1-211ENST00000561010 BLMP54132 1417 aaPredicted RBP10.51□□□□□ -0.73
GABPB1-211ENST00000561010 PLCG2P16885 1265 aa10.51□□□□□ -0.73
GABPB1-211ENST00000561010 HRCP23327 699 aa10.51□□□□□ -0.73
GABPB1-211ENST00000561010 CFAP44Q96MT7 982 aa10.51□□□□□ -0.73
GABPB1-211ENST00000561010 WNK3Q9BYP7 1800 aa10.51□□□□□ -0.73
GABPB1-211ENST00000561010 LMO7Q8WWI1 1683 aa10.5□□□□□ -0.73
GABPB1-211ENST00000561010 SBF2Q86WG5 1849 aa10.5□□□□□ -0.73
GABPB1-211ENST00000561010 ZC3H6P61129 1189 aaKnown RBP10.5□□□□□ -0.73
GABPB1-211ENST00000561010 KRT27Q7Z3Y8 459 aa10.5□□□□□ -0.73
GABPB1-211ENST00000561010 SPRYD3Q8NCJ5 442 aa10.5□□□□□ -0.73
GABPB1-211ENST00000561010 ACEP12821 1306 aa10.5□□□□□ -0.73
GABPB1-211ENST00000561010 KIAA0232Q92628 1395 aa10.5□□□□□ -0.73
GABPB1-211ENST00000561010 SIN3AQ96ST3 1273 aa10.49□□□□□ -0.73
GABPB1-211ENST00000561010 CABP2Q9NPB3 220 aa10.49□□□□□ -0.73
GABPB1-211ENST00000561010 PRDM11Q9NQV5 511 aa10.49□□□□□ -0.73
GABPB1-211ENST00000561010 PIK3C2AO00443 1686 aa10.49□□□□□ -0.73
GABPB1-211ENST00000561010 CAMTA1Q9Y6Y1 1673 aa10.48□□□□□ -0.73
GABPB1-211ENST00000561010 ONECUT3O60422 494 aaPredicted RBP10.48□□□□□ -0.73
GABPB1-211ENST00000561010 GOLGA2Q08379 1002 aa10.48□□□□□ -0.73
GABPB1-211ENST00000561010 NKX1-1Q15270 411 aaPredicted RBP10.48□□□□□ -0.73
GABPB1-211ENST00000561010 STRN4Q9NRL3 753 aa10.48□□□□□ -0.73
GABPB1-211ENST00000561010 SPATA31A5Q5VU36 1347 aa10.48□□□□□ -0.73
GABPB1-211ENST00000561010 SPATA31A7Q8IWB4 1347 aa10.48□□□□□ -0.73
GABPB1-211ENST00000561010 COL18A1P39060 1754 aa10.47□□□□□ -0.73
GABPB1-211ENST00000561010 NBPF8Q3BBV2 869 aa10.47□□□□□ -0.73
GABPB1-211ENST00000561010 CCDC125Q86Z20 511 aa10.47□□□□□ -0.73
GABPB1-211ENST00000561010 PDCD7Q8N8D1 485 aaKnown RBP10.47□□□□□ -0.73
GABPB1-211ENST00000561010 STAC3Q96MF2 364 aa10.47□□□□□ -0.73
GABPB1-211ENST00000561010 POLR3AO14802 1390 aaPredicted RBP10.47□□□□□ -0.73
GABPB1-211ENST00000561010 PPIP5K1Q6PFW1 1433 aa10.47□□□□□ -0.73
GABPB1-211ENST00000561010 L3MBTL2Q969R5 705 aa10.46□□□□□ -0.73
GABPB1-211ENST00000561010 OCEL1Q9H607 264 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms