RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	CPD	O75976	1380 aa		11.15	□□□□□ -0.63
RNF31-222	ENST00000560631	FAM83G	A6ND36	823 aa		11.14	□□□□□ -0.63
RNF31-222	ENST00000560631	NUTM2G	Q5VZR2	741 aa		11.14	□□□□□ -0.63
RNF31-222	ENST00000560631	POTEA	Q6S8J7	498 aa		11.14	□□□□□ -0.63
RNF31-222	ENST00000560631	BCL9L	Q86UU0	1499 aa		11.13	□□□□□ -0.63
RNF31-222	ENST00000560631	KCNH5	Q8NCM2	988 aa		11.13	□□□□□ -0.63
RNF31-222	ENST00000560631	CARD14	Q9BXL6	1004 aa		11.13	□□□□□ -0.63
RNF31-222	ENST00000560631	KIF7	Q2M1P5	1343 aa		11.12	□□□□□ -0.63
RNF31-222	ENST00000560631	OVOS2	A0A0J9YW53	1432 aa		11.12	□□□□□ -0.63
RNF31-222	ENST00000560631	ATRN	O75882	1429 aa		11.12	□□□□□ -0.63
RNF31-222	ENST00000560631	OVOS2	Q6IE36	1432 aa		11.12	□□□□□ -0.63
RNF31-222	ENST00000560631	PLCH1	Q4KWH8	1693 aa		11.12	□□□□□ -0.63
RNF31-222	ENST00000560631	NME9	Q86XW9	330 aa		11.12	□□□□□ -0.63
RNF31-222	ENST00000560631	UNC5CL	Q8IV45	518 aa		11.12	□□□□□ -0.63
RNF31-222	ENST00000560631	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
RNF31-222	ENST00000560631	USP21	Q9UK80	565 aa		11.12	□□□□□ -0.63
RNF31-222	ENST00000560631	COL18A1	P39060	1754 aa		11.12	□□□□□ -0.63
RNF31-222	ENST00000560631	NFAT5	O94916	1531 aa		11.11	□□□□□ -0.63
RNF31-222	ENST00000560631	FYB1	O15117	783 aa		11.11	□□□□□ -0.63
RNF31-222	ENST00000560631	ARHGEF25	Q86VW2	580 aa		11.11	□□□□□ -0.63
RNF31-222	ENST00000560631	QTRT2	Q9H974	415 aa	Known RBP	11.11	□□□□□ -0.63
RNF31-222	ENST00000560631	TRPC5	Q9UL62	973 aa	Predicted RBP	11.11	□□□□□ -0.63
RNF31-222	ENST00000560631	NRAP	Q86VF7	1730 aa		11.11	□□□□□ -0.63
RNF31-222	ENST00000560631	KIAA0232	Q92628	1395 aa		11.11	□□□□□ -0.63
RNF31-222	ENST00000560631	CCDC7	Q96M83	1385 aa		11.11	□□□□□ -0.63
RNF31-222	ENST00000560631	KIF20B	Q96Q89	1820 aa		11.11	□□□□□ -0.63
RNF31-222	ENST00000560631	LMO7	Q8WWI1	1683 aa		11.11	□□□□□ -0.63
RNF31-222	ENST00000560631	ZC3H6	P61129	1189 aa	Known RBP	11.1	□□□□□ -0.63
RNF31-222	ENST00000560631	PRDM11	Q9NQV5	511 aa		11.1	□□□□□ -0.63
RNF31-222	ENST00000560631	ZRANB1	Q9UGI0	708 aa		11.1	□□□□□ -0.63
RNF31-222	ENST00000560631	AATK	Q6ZMQ8	1374 aa		11.1	□□□□□ -0.63
RNF31-222	ENST00000560631	NSD3	Q9BZ95	1437 aa		11.09	□□□□□ -0.63
RNF31-222	ENST00000560631	ABCC6	O95255	1503 aa		11.09	□□□□□ -0.63
RNF31-222	ENST00000560631	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.09	□□□□□ -0.63
RNF31-222	ENST00000560631	RBM6	P78332	1123 aa	Known RBP	11.09	□□□□□ -0.63
RNF31-222	ENST00000560631	ILDR2	Q71H61	639 aa		11.09	□□□□□ -0.63
RNF31-222	ENST00000560631	COG3	Q96JB2	828 aa		11.09	□□□□□ -0.63
RNF31-222	ENST00000560631	POLR3GL	Q9BT43	218 aa		11.09	□□□□□ -0.63
RNF31-222	ENST00000560631	PANK3	Q9H999	370 aa		11.09	□□□□□ -0.63
RNF31-222	ENST00000560631	WASHC2A	Q641Q2	1341 aa		11.09	□□□□□ -0.63
RNF31-222	ENST00000560631	RGPD5	Q99666	1765 aa		11.08	□□□□□ -0.64
RNF31-222	ENST00000560631	PLEKHG5	O94827	1062 aa		11.08	□□□□□ -0.64
RNF31-222	ENST00000560631	RXRB	P28702	533 aa		11.08	□□□□□ -0.64
RNF31-222	ENST00000560631	VPS72	Q15906	364 aa		11.08	□□□□□ -0.64
RNF31-222	ENST00000560631	BTG4	Q9NY30	223 aa		11.08	□□□□□ -0.64
RNF31-222	ENST00000560631	LTN1	O94822	1766 aa		11.08	□□□□□ -0.64
RNF31-222	ENST00000560631	CGNL1	Q0VF96	1302 aa		11.08	□□□□□ -0.64
RNF31-222	ENST00000560631	CAMTA1	Q9Y6Y1	1673 aa		11.08	□□□□□ -0.64
RNF31-222	ENST00000560631	MAP2	P11137	1827 aa	Known RBP	11.07	□□□□□ -0.64
RNF31-222	ENST00000560631	ANKRD26	Q9UPS8	1709 aa		11.07	□□□□□ -0.64
RNF31-222	ENST00000560631	CHRNA2	Q15822	529 aa		11.07	□□□□□ -0.64
RNF31-222	ENST00000560631	GJD4	Q96KN9	370 aa	Predicted RBP	11.07	□□□□□ -0.64
RNF31-222	ENST00000560631	PER1	O15534	1290 aa	Predicted RBP	11.06	□□□□□ -0.64
RNF31-222	ENST00000560631	ONECUT3	O60422	494 aa	Predicted RBP	11.06	□□□□□ -0.64
RNF31-222	ENST00000560631	CD44	P16070	742 aa	Known RBP	11.06	□□□□□ -0.64
RNF31-222	ENST00000560631	GGNBP2	Q9H3C7	697 aa		11.06	□□□□□ -0.64
RNF31-222	ENST00000560631	NSD2	O96028	1365 aa		11.05	□□□□□ -0.64
RNF31-222	ENST00000560631	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.05	□□□□□ -0.64
RNF31-222	ENST00000560631	SPATA31A5	Q5VU36	1347 aa		11.05	□□□□□ -0.64
RNF31-222	ENST00000560631	SPATA31A7	Q8IWB4	1347 aa		11.05	□□□□□ -0.64
RNF31-222	ENST00000560631	NPC1L1	Q9UHC9	1359 aa		11.04	□□□□□ -0.64
RNF31-222	ENST00000560631	GLI3	P10071	1580 aa		11.04	□□□□□ -0.64
RNF31-222	ENST00000560631	AXIN2	Q9Y2T1	843 aa		11.04	□□□□□ -0.64
RNF31-222	ENST00000560631	COL5A2	P05997	1499 aa	Predicted RBP	11.04	□□□□□ -0.64
RNF31-222	ENST00000560631	KIF24	Q5T7B8	1368 aa		11.03	□□□□□ -0.64
RNF31-222	ENST00000560631	CLCN6	P51797	869 aa		11.03	□□□□□ -0.64
RNF31-222	ENST00000560631	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.03	□□□□□ -0.64
RNF31-222	ENST00000560631	IP6K1	Q92551	441 aa		11.03	□□□□□ -0.64
RNF31-222	ENST00000560631	KNSTRN	Q9Y448	316 aa		11.03	□□□□□ -0.64
RNF31-222	ENST00000560631	EVA1C	P58658	441 aa		11.02	□□□□□ -0.65
RNF31-222	ENST00000560631	THRAP3	Q9Y2W1	955 aa	Known RBP	11.02	□□□□□ -0.65
RNF31-222	ENST00000560631	MAP3K19	Q56UN5	1328 aa		11.02	□□□□□ -0.65
RNF31-222	ENST00000560631	SPATA31A1	Q5TZJ5	1347 aa		11.02	□□□□□ -0.65
RNF31-222	ENST00000560631	WDR17	Q8IZU2	1322 aa		11.02	□□□□□ -0.65
RNF31-222	ENST00000560631	RTL1	A6NKG5	1358 aa		11.02	□□□□□ -0.65
RNF31-222	ENST00000560631	BLM	P54132	1417 aa	Predicted RBP	11.01	□□□□□ -0.65
RNF31-222	ENST00000560631	BRWD3	Q6RI45	1802 aa		11.01	□□□□□ -0.65
RNF31-222	ENST00000560631	SOX12	O15370	315 aa		11.01	□□□□□ -0.65
RNF31-222	ENST00000560631	LARP1	Q6PKG0	1096 aa	Known RBP	11.01	□□□□□ -0.65
RNF31-222	ENST00000560631	BARGIN	Q6ZT62	677 aa		11.01	□□□□□ -0.65
RNF31-222	ENST00000560631	RGS12	O14924	1447 aa		11.01	□□□□□ -0.65
RNF31-222	ENST00000560631	CRB1	P82279	1406 aa		11.01	□□□□□ -0.65
RNF31-222	ENST00000560631	FBLN1	P23142	703 aa		11	□□□□□ -0.65
RNF31-222	ENST00000560631	HOXC9	P31274	260 aa		11	□□□□□ -0.65
RNF31-222	ENST00000560631	STRN4	Q9NRL3	753 aa		11	□□□□□ -0.65
RNF31-222	ENST00000560631	FAM208A	Q9UK61	1670 aa	Known RBP	11	□□□□□ -0.65
RNF31-222	ENST00000560631	ERBB3	P21860	1342 aa		11	□□□□□ -0.65
RNF31-222	ENST00000560631	THSD7A	Q9UPZ6	1657 aa		10.99	□□□□□ -0.65
RNF31-222	ENST00000560631	ZBTB7C	A1YPR0	619 aa		10.99	□□□□□ -0.65
RNF31-222	ENST00000560631	AMPH	P49418	695 aa		10.99	□□□□□ -0.65
RNF31-222	ENST00000560631	TCP11L2	Q8N4U5	519 aa		10.99	□□□□□ -0.65
RNF31-222	ENST00000560631	CARD10	Q9BWT7	1032 aa		10.99	□□□□□ -0.65
RNF31-222	ENST00000560631	CCDC9	Q9Y3X0	531 aa	Known RBP	10.99	□□□□□ -0.65
RNF31-222	ENST00000560631	PEAK1	Q9H792	1746 aa		10.98	□□□□□ -0.65
RNF31-222	ENST00000560631	RRS1	Q15050	365 aa	Known RBP	10.98	□□□□□ -0.65
RNF31-222	ENST00000560631	POLK	Q9UBT6	870 aa		10.98	□□□□□ -0.65
RNF31-222	ENST00000560631	INSR	P06213	1382 aa		10.98	□□□□□ -0.65
RNF31-222	ENST00000560631	FLT4	P35916	1363 aa		10.98	□□□□□ -0.65
RNF31-222	ENST00000560631	SOCS7	O14512	581 aa		10.97	□□□□□ -0.65
RNF31-222	ENST00000560631	POTEI	P0CG38	1075 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms