RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 ZFP42Q96MM3 310 aa8.07□□□□□ -1.12
TMOD3-207ENST00000560549 ZFAND3Q9H8U3 227 aa8.07□□□□□ -1.12
TMOD3-207ENST00000560549 ZIC2O95409 532 aaPredicted RBP8.06□□□□□ -1.12
TMOD3-207ENST00000560549 FSHRP23945 695 aa8.06□□□□□ -1.12
TMOD3-207ENST00000560549 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
TMOD3-207ENST00000560549 VASH1Q7L8A9 365 aaPredicted RBP8.06□□□□□ -1.12
TMOD3-207ENST00000560549 BANK1Q8NDB2 785 aa8.06□□□□□ -1.12
TMOD3-207ENST00000560549 ADAM32Q8TC27 787 aa8.06□□□□□ -1.12
TMOD3-207ENST00000560549 CDV3Q9UKY7 258 aaKnown RBP8.06□□□□□ -1.12
TMOD3-207ENST00000560549 TERTO14746 1132 aaKnown RBP8.05□□□□□ -1.12
TMOD3-207ENST00000560549 WFS1O76024 890 aa8.05□□□□□ -1.12
TMOD3-207ENST00000560549 PTK2Q05397 1052 aa8.05□□□□□ -1.12
TMOD3-207ENST00000560549 MEIOBQ8N635 442 aa8.05□□□□□ -1.12
TMOD3-207ENST00000560549 SOCS7O14512 581 aa8.04□□□□□ -1.12
TMOD3-207ENST00000560549 FBXO45P0C2W1 286 aa8.04□□□□□ -1.12
TMOD3-207ENST00000560549 CCDC116Q8IYX3 515 aa8.04□□□□□ -1.12
TMOD3-207ENST00000560549 ZBTB33Q86T24 672 aa8.03□□□□□ -1.12
TMOD3-207ENST00000560549 EMILIN1Q9Y6C2 1016 aa8.03□□□□□ -1.12
TMOD3-207ENST00000560549 NPAS3Q8IXF0 933 aa8.02□□□□□ -1.13
TMOD3-207ENST00000560549 PNMA1Q8ND90 353 aa8.02□□□□□ -1.13
TMOD3-207ENST00000560549 SLC10A4Q96EP9 437 aa8.02□□□□□ -1.13
TMOD3-207ENST00000560549 KCTD15Q96SI1 283 aaPredicted RBP8.02□□□□□ -1.13
TMOD3-207ENST00000560549 TBC1D2BQ9UPU7 963 aa8.02□□□□□ -1.13
TMOD3-207ENST00000560549 GTF3C3Q9Y5Q9 886 aa8.02□□□□□ -1.13
TMOD3-207ENST00000560549 WIPF1O43516 503 aa8.01□□□□□ -1.13
TMOD3-207ENST00000560549 SCARF1Q14162 830 aa8.01□□□□□ -1.13
TMOD3-207ENST00000560549 PPP1R26Q5T8A7 1209 aaPredicted RBP8.01□□□□□ -1.13
TMOD3-207ENST00000560549 PURBQ96QR8 312 aaKnown RBP8.01□□□□□ -1.13
TMOD3-207ENST00000560549 INTS6LQ5JSJ4 861 aaKnown RBP8□□□□□ -1.13
TMOD3-207ENST00000560549 Q6ZVU0 165 aa8□□□□□ -1.13
TMOD3-207ENST00000560549 NXF1Q9UBU9 619 aaKnown RBP8□□□□□ -1.13
TMOD3-207ENST00000560549 ZBBXA8MT70 800 aa8□□□□□ -1.13
TMOD3-207ENST00000560549 MCM6Q14566 821 aa8□□□□□ -1.13
TMOD3-207ENST00000560549 LINC00528Q8N1L1 170 aa8□□□□□ -1.13
TMOD3-207ENST00000560549 TIMELESSQ9UNS1 1208 aa8□□□□□ -1.13
TMOD3-207ENST00000560549 NDUFB9Q9Y6M9 179 aa8□□□□□ -1.13
TMOD3-207ENST00000560549 ESPNB1AK53 854 aa7.99□□□□□ -1.13
TMOD3-207ENST00000560549 DHX9Q08211 1270 aaKnown RBP7.98□□□□□ -1.13
TMOD3-207ENST00000560549 IRF5Q13568 498 aa7.98□□□□□ -1.13
TMOD3-207ENST00000560549 PGPEP1Q9NXJ5 209 aa7.98□□□□□ -1.13
TMOD3-207ENST00000560549 H3BM21 787 aa7.97□□□□□ -1.13
TMOD3-207ENST00000560549 NBPF20Q3BBV1 942 aa7.97□□□□□ -1.13
TMOD3-207ENST00000560549 TSEN34Q9BSV6 310 aaKnown RBP7.97□□□□□ -1.13
TMOD3-207ENST00000560549 TMPRSS4Q9NRS4 437 aa7.97□□□□□ -1.13
TMOD3-207ENST00000560549 SOS2Q07890 1332 aaPredicted RBP7.97□□□□□ -1.13
TMOD3-207ENST00000560549 CBLBQ13191 982 aa7.96□□□□□ -1.13
TMOD3-207ENST00000560549 RAB15P59190 212 aa7.95□□□□□ -1.14
TMOD3-207ENST00000560549 NR1H3Q13133 447 aa7.95□□□□□ -1.14
TMOD3-207ENST00000560549 C6orf118Q5T5N4 469 aa7.95□□□□□ -1.14
TMOD3-207ENST00000560549 DZIP3Q86Y13 1208 aaKnown RBP7.95□□□□□ -1.14
TMOD3-207ENST00000560549 ABCC9O60706 1549 aa7.95□□□□□ -1.14
TMOD3-207ENST00000560549 SOBPA7XYQ1 873 aa7.94□□□□□ -1.14
TMOD3-207ENST00000560549 UPP2O95045 317 aa7.94□□□□□ -1.14
TMOD3-207ENST00000560549 BMP2P12643 396 aa7.94□□□□□ -1.14
TMOD3-207ENST00000560549 SEPT12Q8IYM1 358 aa7.94□□□□□ -1.14
TMOD3-207ENST00000560549 GDPD2Q9HCC8 539 aa7.94□□□□□ -1.14
TMOD3-207ENST00000560549 PCDHB9Q9Y5E1 797 aa7.94□□□□□ -1.14
TMOD3-207ENST00000560549 ERVH48-1M5A8F1 160 aa7.94□□□□□ -1.14
TMOD3-207ENST00000560549 SPINT1O43278 529 aa7.94□□□□□ -1.14
TMOD3-207ENST00000560549 GIGYF1O75420 1035 aaPredicted RBP7.94□□□□□ -1.14
TMOD3-207ENST00000560549 DNMT3LQ9UJW3 386 aa7.94□□□□□ -1.14
TMOD3-207ENST00000560549 LILRA1O75019 489 aa7.93□□□□□ -1.14
TMOD3-207ENST00000560549 VSIG8P0DPA2 414 aa7.93□□□□□ -1.14
TMOD3-207ENST00000560549 ZNF784Q8NCA9 323 aaPredicted RBP7.93□□□□□ -1.14
TMOD3-207ENST00000560549 SLC16A10Q8TF71 515 aa7.93□□□□□ -1.14
TMOD3-207ENST00000560549 POM121Q96HA1 1249 aa7.93□□□□□ -1.14
TMOD3-207ENST00000560549 ERBB4Q15303 1308 aa7.91□□□□□ -1.14
TMOD3-207ENST00000560549 MAN1A2O60476 641 aa7.91□□□□□ -1.14
TMOD3-207ENST00000560549 ADD1P35611 737 aaKnown RBP7.91□□□□□ -1.14
TMOD3-207ENST00000560549 KDF1Q8NAX2 398 aaPredicted RBP7.91□□□□□ -1.14
TMOD3-207ENST00000560549 COG6Q9Y2V7 657 aa7.91□□□□□ -1.14
TMOD3-207ENST00000560549 VAC14Q08AM6 782 aa7.9□□□□□ -1.14
TMOD3-207ENST00000560549 IRF7Q92985 503 aa7.9□□□□□ -1.14
TMOD3-207ENST00000560549 AGBL1Q96MI9 1066 aa7.9□□□□□ -1.14
TMOD3-207ENST00000560549 APBB1O00213 710 aa7.89□□□□□ -1.15
TMOD3-207ENST00000560549 ABL2P42684 1182 aa7.89□□□□□ -1.15
TMOD3-207ENST00000560549 VEGFBP49765 207 aa7.89□□□□□ -1.15
TMOD3-207ENST00000560549 TTLL8A6PVC2 850 aa7.88□□□□□ -1.15
TMOD3-207ENST00000560549 ADH1AP07327 375 aa7.88□□□□□ -1.15
TMOD3-207ENST00000560549 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
TMOD3-207ENST00000560549 MCCD1P59942 119 aaPredicted RBP7.88□□□□□ -1.15
TMOD3-207ENST00000560549 CCDC125Q86Z20 511 aa7.88□□□□□ -1.15
TMOD3-207ENST00000560549 GMPRP36959 345 aa7.87□□□□□ -1.15
TMOD3-207ENST00000560549 INSM1Q01101 510 aaPredicted RBP7.87□□□□□ -1.15
TMOD3-207ENST00000560549 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.87□□□□□ -1.15
TMOD3-207ENST00000560549 CYLDQ9NQC7 956 aa7.87□□□□□ -1.15
TMOD3-207ENST00000560549 PPFIA3O75145 1194 aa7.87□□□□□ -1.15
TMOD3-207ENST00000560549 SCTRP47872 440 aa7.87□□□□□ -1.15
TMOD3-207ENST00000560549 RELBQ01201 579 aa7.86□□□□□ -1.15
TMOD3-207ENST00000560549 TSGA10IPQ3SY00 556 aa7.86□□□□□ -1.15
TMOD3-207ENST00000560549 CCDC85AQ96PX6 553 aaPredicted RBP7.86□□□□□ -1.15
TMOD3-207ENST00000560549 PTGIRP43119 386 aa7.85□□□□□ -1.15
TMOD3-207ENST00000560549 CTSOP43234 321 aaPredicted RBP7.85□□□□□ -1.15
TMOD3-207ENST00000560549 ZNF592Q92610 1267 aa7.85□□□□□ -1.15
TMOD3-207ENST00000560549 CEP126Q9P2H0 1117 aa7.85□□□□□ -1.15
TMOD3-207ENST00000560549 ERVK-9P63128 1117 aa7.84□□□□□ -1.15
TMOD3-207ENST00000560549 RNF217Q8TC41 542 aa7.84□□□□□ -1.15
TMOD3-207ENST00000560549 INSM2Q96T92 566 aaPredicted RBP7.84□□□□□ -1.15
TMOD3-207ENST00000560549 CDCA7Q9BWT1 371 aaPredicted RBP7.84□□□□□ -1.15
TMOD3-207ENST00000560549 ZNF395Q9H8N7 513 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms