RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 SPOCK2Q92563 424 aa10.25□□□□□ -0.77
HERC1-208ENST00000560462 TCP11L2Q8N4U5 519 aa10.24□□□□□ -0.77
HERC1-208ENST00000560462 PRDM10Q9NQV6 1147 aa10.24□□□□□ -0.77
HERC1-208ENST00000560462 PHF8Q9UPP1 1060 aa10.24□□□□□ -0.77
HERC1-208ENST00000560462 NMRK2Q9NPI5 230 aa10.23□□□□□ -0.77
HERC1-208ENST00000560462 PEAK1Q9H792 1746 aa10.23□□□□□ -0.77
HERC1-208ENST00000560462 TOPAZ1Q8N9V7 1692 aa10.22□□□□□ -0.77
HERC1-208ENST00000560462 PRKCSHP14314 528 aaPredicted RBP10.22□□□□□ -0.77
HERC1-208ENST00000560462 EVA1CP58658 441 aa10.22□□□□□ -0.77
HERC1-208ENST00000560462 CHRNA2Q15822 529 aa10.21□□□□□ -0.77
HERC1-208ENST00000560462 THRAP3Q9Y2W1 955 aaKnown RBP10.21□□□□□ -0.77
HERC1-208ENST00000560462 SSH2Q76I76 1423 aa10.21□□□□□ -0.78
HERC1-208ENST00000560462 ECM2O94769 699 aaPredicted RBP10.2□□□□□ -0.78
HERC1-208ENST00000560462 ATP7BP35670 1465 aa10.2□□□□□ -0.78
HERC1-208ENST00000560462 SBF2Q86WG5 1849 aa10.2□□□□□ -0.78
HERC1-208ENST00000560462 ANKRD30AQ9BXX3 1397 aa10.2□□□□□ -0.78
HERC1-208ENST00000560462 SPINK5Q9NQ38 1064 aaPredicted RBP10.2□□□□□ -0.78
HERC1-208ENST00000560462 TNRC18O15417 2968 aaPredicted RBP10.2□□□□□ -0.78
HERC1-208ENST00000560462 PARP4Q9UKK3 1724 aaKnown RBP10.19□□□□□ -0.78
HERC1-208ENST00000560462 NRXN1Q9ULB1 1477 aa10.19□□□□□ -0.78
HERC1-208ENST00000560462 KIAA0232Q92628 1395 aa10.19□□□□□ -0.78
HERC1-208ENST00000560462 CCDC85CA6NKD9 419 aa10.19□□□□□ -0.78
HERC1-208ENST00000560462 FOXN1O15353 648 aa10.19□□□□□ -0.78
HERC1-208ENST00000560462 FMN2Q9NZ56 1722 aa10.19□□□□□ -0.78
HERC1-208ENST00000560462 ZNF827Q17R98 1081 aa10.18□□□□□ -0.78
HERC1-208ENST00000560462 LARP1Q6PKG0 1096 aaKnown RBP10.18□□□□□ -0.78
HERC1-208ENST00000560462 KDM2AQ9Y2K7 1162 aa10.18□□□□□ -0.78
HERC1-208ENST00000560462 COL24A1Q17RW2 1714 aa10.17□□□□□ -0.78
HERC1-208ENST00000560462 PAPPAQ13219 1627 aa10.17□□□□□ -0.78
HERC1-208ENST00000560462 E9PCH4 1651 aa10.16□□□□□ -0.78
HERC1-208ENST00000560462 WAPLQ7Z5K2 1190 aa10.16□□□□□ -0.78
HERC1-208ENST00000560462 CHIC2Q9UKJ5 165 aa10.16□□□□□ -0.78
HERC1-208ENST00000560462 CTCFP49711 727 aaPredicted RBP10.15□□□□□ -0.78
HERC1-208ENST00000560462 DDB1Q16531 1140 aa10.15□□□□□ -0.78
HERC1-208ENST00000560462 PAXIP1Q6ZW49 1069 aaPredicted RBP10.15□□□□□ -0.78
HERC1-208ENST00000560462 CD2APQ9Y5K6 639 aa10.15□□□□□ -0.78
HERC1-208ENST00000560462 BCL9O00512 1426 aa10.15□□□□□ -0.79
HERC1-208ENST00000560462 DAPK1P53355 1430 aa10.15□□□□□ -0.79
HERC1-208ENST00000560462 SMC1BQ8NDV3 1235 aa10.14□□□□□ -0.79
HERC1-208ENST00000560462 PNPLA7Q6ZV29 1317 aa10.13□□□□□ -0.79
HERC1-208ENST00000560462 ALS2Q96Q42 1657 aa10.13□□□□□ -0.79
HERC1-208ENST00000560462 AIDAQ96BJ3 306 aa10.13□□□□□ -0.79
HERC1-208ENST00000560462 PHRF1Q9P1Y6 1649 aaKnown RBP10.12□□□□□ -0.79
HERC1-208ENST00000560462 VGFO15240 615 aaPredicted RBP10.12□□□□□ -0.79
HERC1-208ENST00000560462 ZC3H6P61129 1189 aaKnown RBP10.12□□□□□ -0.79
HERC1-208ENST00000560462 MARCH10Q8NA82 808 aaPredicted RBP10.12□□□□□ -0.79
HERC1-208ENST00000560462 TRPM3Q9HCF6 1732 aaPredicted RBP10.12□□□□□ -0.79
HERC1-208ENST00000560462 CRYBG1Q9Y4K1 1723 aa10.12□□□□□ -0.79
HERC1-208ENST00000560462 GPRASP1Q5JY77 1395 aa10.12□□□□□ -0.79
HERC1-208ENST00000560462 LRRC37A3O60309 1634 aa10.11□□□□□ -0.79
HERC1-208ENST00000560462 PDE4DIPQ5VU43 2346 aa10.11□□□□□ -0.79
HERC1-208ENST00000560462 TPRNQ4KMQ1 711 aa10.11□□□□□ -0.79
HERC1-208ENST00000560462 AKT1S1Q96B36 256 aa10.11□□□□□ -0.79
HERC1-208ENST00000560462 CFAP44Q96MT7 982 aa10.11□□□□□ -0.79
HERC1-208ENST00000560462 ANKRD50Q9ULJ7 1429 aa10.1□□□□□ -0.79
HERC1-208ENST00000560462 LBX1P52954 281 aa10.1□□□□□ -0.79
HERC1-208ENST00000560462 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
HERC1-208ENST00000560462 TFCP2L1Q9NZI6 479 aa10.1□□□□□ -0.79
HERC1-208ENST00000560462 STK26Q9P289 416 aa10.1□□□□□ -0.79
HERC1-208ENST00000560462 CLTCL1P53675 1640 aa10.1□□□□□ -0.79
HERC1-208ENST00000560462 PLEKHH1Q9ULM0 1364 aa10.1□□□□□ -0.79
HERC1-208ENST00000560462 IGSF1Q8N6C5 1336 aa10.09□□□□□ -0.79
HERC1-208ENST00000560462 RGPD8O14715 1765 aaPredicted RBP10.09□□□□□ -0.79
HERC1-208ENST00000560462 BRD4O60885 1362 aaPredicted RBP10.09□□□□□ -0.79
HERC1-208ENST00000560462 C10orf71Q711Q0 1435 aa10.08□□□□□ -0.8
HERC1-208ENST00000560462 CICQ96RK0 1608 aaPredicted RBP10.08□□□□□ -0.8
HERC1-208ENST00000560462 QSER1Q2KHR3 1735 aa10.08□□□□□ -0.8
HERC1-208ENST00000560462 PAK3O75914 559 aaPredicted RBP10.08□□□□□ -0.8
HERC1-208ENST00000560462 PRPF38BQ5VTL8 546 aaKnown RBP10.08□□□□□ -0.8
HERC1-208ENST00000560462 LRRC4BQ9NT99 713 aa10.08□□□□□ -0.8
HERC1-208ENST00000560462 KDM2BQ8NHM5 1336 aa10.07□□□□□ -0.8
HERC1-208ENST00000560462 CRB1P82279 1406 aa10.07□□□□□ -0.8
HERC1-208ENST00000560462 ACIN1Q9UKV3 1341 aaKnown RBP10.07□□□□□ -0.8
HERC1-208ENST00000560462 ANKRD30BQ9BXX2 1392 aa10.06□□□□□ -0.8
HERC1-208ENST00000560462 RGL2O15211 777 aa10.06□□□□□ -0.8
HERC1-208ENST00000560462 RRAGCQ9HB90 399 aa10.06□□□□□ -0.8
HERC1-208ENST00000560462 MKRN1Q9UHC7 482 aaKnown RBP10.06□□□□□ -0.8
HERC1-208ENST00000560462 PXDNLA1KZ92 1463 aa10.05□□□□□ -0.8
HERC1-208ENST00000560462 IFT172Q9UG01 1749 aa10.05□□□□□ -0.8
HERC1-208ENST00000560462 MSL1Q68DK7 614 aa10.05□□□□□ -0.8
HERC1-208ENST00000560462 PLCD3Q8N3E9 789 aa10.05□□□□□ -0.8
HERC1-208ENST00000560462 HIRIP3Q9BW71 556 aaPredicted RBP10.05□□□□□ -0.8
HERC1-208ENST00000560462 PLEKHG2Q9H7P9 1386 aa10.04□□□□□ -0.8
HERC1-208ENST00000560462 ZNF692Q9BU19 519 aaPredicted RBP10.04□□□□□ -0.8
HERC1-208ENST00000560462 COL5A2P05997 1499 aaPredicted RBP10.04□□□□□ -0.8
HERC1-208ENST00000560462 AKAP12Q02952 1782 aa10.03□□□□□ -0.8
HERC1-208ENST00000560462 ABCC11Q96J66 1382 aa10.03□□□□□ -0.8
HERC1-208ENST00000560462 KCPQ6ZWJ8 1503 aa10.03□□□□□ -0.8
HERC1-208ENST00000560462 LMO7Q8WWI1 1683 aa10.03□□□□□ -0.8
HERC1-208ENST00000560462 DLL1O00548 723 aa10.03□□□□□ -0.8
HERC1-208ENST00000560462 ANKARQ7Z5J8 1434 aa10.02□□□□□ -0.81
HERC1-208ENST00000560462 SLC27A3Q5K4L6 730 aa10.02□□□□□ -0.81
HERC1-208ENST00000560462 CDCA7Q9BWT1 371 aaPredicted RBP10.02□□□□□ -0.81
HERC1-208ENST00000560462 CPDO75976 1380 aa10.01□□□□□ -0.81
HERC1-208ENST00000560462 SPDYE2BA6NHP3 402 aa10.01□□□□□ -0.81
HERC1-208ENST00000560462 SPDYE6P0CI01 402 aa10.01□□□□□ -0.81
HERC1-208ENST00000560462 HSPA8P11142 646 aaKnown RBP10.01□□□□□ -0.81
HERC1-208ENST00000560462 SPDYE2Q495Y8 402 aa10.01□□□□□ -0.81
HERC1-208ENST00000560462 ACSBG1Q96GR2 724 aa10.01□□□□□ -0.81
HERC1-208ENST00000560462 CREBZFQ9NS37 354 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms