RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 DMRT2Q9Y5R5 561 aa30.82■■■□□ 2.53
TM2D3-209ENST00000560013 TRPM3Q9HCF6 1732 aaPredicted RBP30.82■■■□□ 2.52
TM2D3-209ENST00000560013 KRT28Q7Z3Y7 464 aa30.81■■■□□ 2.52
TM2D3-209ENST00000560013 AMPHP49418 695 aa30.8■■■□□ 2.52
TM2D3-209ENST00000560013 XPCQ01831 940 aaPredicted RBP30.8■■■□□ 2.52
TM2D3-209ENST00000560013 KIF24Q5T7B8 1368 aa30.8■■■□□ 2.52
TM2D3-209ENST00000560013 ERICH6BQ5W0A0 696 aa30.79■■■□□ 2.52
TM2D3-209ENST00000560013 RGPD1P0DJD0 1748 aa30.76■■■□□ 2.52
TM2D3-209ENST00000560013 RIPK4P57078 832 aa30.75■■■□□ 2.51
TM2D3-209ENST00000560013 KCNH5Q8NCM2 988 aa30.75■■■□□ 2.51
TM2D3-209ENST00000560013 LTN1O94822 1766 aa30.75■■■□□ 2.51
TM2D3-209ENST00000560013 TRIM35Q9UPQ4 493 aa30.74■■■□□ 2.51
TM2D3-209ENST00000560013 NFAT5O94916 1531 aa30.73■■■□□ 2.51
TM2D3-209ENST00000560013 PHACTR3Q96KR7 559 aa30.73■■■□□ 2.51
TM2D3-209ENST00000560013 HOXC9P31274 260 aa30.72■■■□□ 2.51
TM2D3-209ENST00000560013 RRP1P56182 461 aaKnown RBP30.72■■■□□ 2.51
TM2D3-209ENST00000560013 SULT6B1Q6IMI4 303 aa30.71■■■□□ 2.51
TM2D3-209ENST00000560013 ALS2Q96Q42 1657 aa30.7■■■□□ 2.51
TM2D3-209ENST00000560013 LMOD2Q6P5Q4 547 aa30.7■■■□□ 2.51
TM2D3-209ENST00000560013 RTL1A6NKG5 1358 aa30.7■■■□□ 2.51
TM2D3-209ENST00000560013 NFE2L2Q16236 605 aa30.7■■■□□ 2.5
TM2D3-209ENST00000560013 NPHP3Q7Z494 1330 aa30.7■■■□□ 2.5
TM2D3-209ENST00000560013 SLIT3O75094 1523 aa30.69■■■□□ 2.5
TM2D3-209ENST00000560013 ARHGEF10O15013 1369 aa30.68■■■□□ 2.5
TM2D3-209ENST00000560013 AEBP1Q8IUX7 1158 aa30.67■■■□□ 2.5
TM2D3-209ENST00000560013 USP19O94966 1318 aa30.66■■■□□ 2.5
TM2D3-209ENST00000560013 GCP02774 474 aa30.66■■■□□ 2.5
TM2D3-209ENST00000560013 PHRF1Q9P1Y6 1649 aaKnown RBP30.66■■■□□ 2.5
TM2D3-209ENST00000560013 DDX17Q92841 729 aaKnown RBP30.65■■■□□ 2.5
TM2D3-209ENST00000560013 MYH16Q9H6N6 1097 aa30.65■■■□□ 2.5
TM2D3-209ENST00000560013 DLG5Q8TDM6 1919 aa30.65■■■□□ 2.5
TM2D3-209ENST00000560013 IL16Q14005 1332 aa30.64■■■□□ 2.5
TM2D3-209ENST00000560013 PELP1Q8IZL8 1130 aaKnown RBP30.64■■■□□ 2.5
TM2D3-209ENST00000560013 IP6K1Q92551 441 aa30.64■■■□□ 2.5
TM2D3-209ENST00000560013 SLAIN2Q9P270 581 aa30.63■■■□□ 2.49
TM2D3-209ENST00000560013 BRINP3Q76B58 766 aa30.63■■■□□ 2.49
TM2D3-209ENST00000560013 IGSF1Q8N6C5 1336 aa30.62■■■□□ 2.49
TM2D3-209ENST00000560013 EYA1Q99502 592 aa30.62■■■□□ 2.49
TM2D3-209ENST00000560013 KDRP35968 1356 aa30.61■■■□□ 2.49
TM2D3-209ENST00000560013 PXDNQ92626 1479 aa30.61■■■□□ 2.49
TM2D3-209ENST00000560013 PPP4R2Q9NY27 417 aa30.59■■■□□ 2.49
TM2D3-209ENST00000560013 ARHGEF25Q86VW2 580 aa30.59■■■□□ 2.49
TM2D3-209ENST00000560013 LMOD3Q0VAK6 560 aa30.58■■■□□ 2.49
TM2D3-209ENST00000560013 TNS3Q68CZ2 1445 aa30.57■■■□□ 2.48
TM2D3-209ENST00000560013 PLEKHG5O94827 1062 aa30.56■■■□□ 2.48
TM2D3-209ENST00000560013 LTV1Q96GA3 475 aaPredicted RBP30.56■■■□□ 2.48
TM2D3-209ENST00000560013 MED1Q15648 1581 aaPredicted RBP30.56■■■□□ 2.48
TM2D3-209ENST00000560013 ZBTB7CA1YPR0 619 aa30.55■■■□□ 2.48
TM2D3-209ENST00000560013 CALD1Q05682 793 aaKnown RBP30.55■■■□□ 2.48
TM2D3-209ENST00000560013 PLIN1O60240 522 aa30.54■■■□□ 2.48
TM2D3-209ENST00000560013 SPATA31A3Q5VYP0 1347 aa30.54■■■□□ 2.48
TM2D3-209ENST00000560013 FANCIQ9NVI1 1328 aa30.54■■■□□ 2.48
TM2D3-209ENST00000560013 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.52■■■□□ 2.48
TM2D3-209ENST00000560013 TSR2Q969E8 191 aaKnown RBP30.52■■■□□ 2.48
TM2D3-209ENST00000560013 SOS2Q07890 1332 aaPredicted RBP30.48■■■□□ 2.47
TM2D3-209ENST00000560013 BCAR3O75815 825 aa30.48■■■□□ 2.47
TM2D3-209ENST00000560013 CT47B1P0C2W7 299 aaPredicted RBP30.48■■■□□ 2.47
TM2D3-209ENST00000560013 THUMPD2Q9BTF0 503 aaKnown RBP30.48■■■□□ 2.47
TM2D3-209ENST00000560013 CRYBG1Q9Y4K1 1723 aa30.46■■■□□ 2.47
TM2D3-209ENST00000560013 FAM83GA6ND36 823 aa30.46■■■□□ 2.47
TM2D3-209ENST00000560013 RGPD2P0DJD1 1756 aa30.45■■■□□ 2.47
TM2D3-209ENST00000560013 ZC3H6P61129 1189 aaKnown RBP30.45■■■□□ 2.47
TM2D3-209ENST00000560013 GNAI1P63096 354 aa30.45■■■□□ 2.47
TM2D3-209ENST00000560013 EXOSC9Q06265 439 aaKnown RBP30.45■■■□□ 2.47
TM2D3-209ENST00000560013 MTHFSDQ2M296 383 aaKnown RBP30.45■■■□□ 2.47
TM2D3-209ENST00000560013 IFT57Q9NWB7 429 aa30.45■■■□□ 2.47
TM2D3-209ENST00000560013 RGPD5Q99666 1765 aa30.45■■■□□ 2.46
TM2D3-209ENST00000560013 RARSP54136 660 aaKnown RBP30.44■■■□□ 2.46
TM2D3-209ENST00000560013 NBPF6Q5VWK0 638 aa30.44■■■□□ 2.46
TM2D3-209ENST00000560013 GAS2L2Q8NHY3 880 aa30.44■■■□□ 2.46
TM2D3-209ENST00000560013 NBPF4Q96M43 638 aa30.44■■■□□ 2.46
TM2D3-209ENST00000560013 LAS1LQ9Y4W2 734 aaKnown RBP30.44■■■□□ 2.46
TM2D3-209ENST00000560013 EXOC6Q8TAG9 804 aa30.43■■■□□ 2.46
TM2D3-209ENST00000560013 ZNF853P0CG23 659 aa30.42■■■□□ 2.46
TM2D3-209ENST00000560013 NHSL1Q5SYE7 1610 aa30.42■■■□□ 2.46
TM2D3-209ENST00000560013 DCTN1Q14203 1278 aa30.42■■■□□ 2.46
TM2D3-209ENST00000560013 CABLES1Q8TDN4 633 aa30.42■■■□□ 2.46
TM2D3-209ENST00000560013 AXIN2Q9Y2T1 843 aa30.42■■■□□ 2.46
TM2D3-209ENST00000560013 LTBP4Q8N2S1 1624 aa30.41■■■□□ 2.46
TM2D3-209ENST00000560013 USHBP1Q8N6Y0 703 aa30.41■■■□□ 2.46
TM2D3-209ENST00000560013 ANKRD24Q8TF21 1146 aa30.41■■■□□ 2.46
TM2D3-209ENST00000560013 CFAP44Q96MT7 982 aa30.41■■■□□ 2.46
TM2D3-209ENST00000560013 C20orf194Q5TEA3 1177 aa30.39■■■□□ 2.46
TM2D3-209ENST00000560013 B4GALNT3Q6L9W6 998 aa30.39■■■□□ 2.46
TM2D3-209ENST00000560013 LRRC59Q96AG4 307 aaKnown RBP30.38■■■□□ 2.45
TM2D3-209ENST00000560013 COL18A1P39060 1754 aa30.38■■■□□ 2.45
TM2D3-209ENST00000560013 MCM10Q7L590 875 aa30.37■■■□□ 2.45
TM2D3-209ENST00000560013 RTF1Q92541 710 aaKnown RBP30.36■■■□□ 2.45
TM2D3-209ENST00000560013 CRBNQ96SW2 442 aa30.36■■■□□ 2.45
TM2D3-209ENST00000560013 MBIPQ9NS73 344 aa30.36■■■□□ 2.45
TM2D3-209ENST00000560013 NCAPD2Q15021 1401 aa30.35■■■□□ 2.45
TM2D3-209ENST00000560013 ABCC6O95255 1503 aa30.35■■■□□ 2.45
TM2D3-209ENST00000560013 CAMTA1Q9Y6Y1 1673 aa30.35■■■□□ 2.45
TM2D3-209ENST00000560013 CPDO75976 1380 aa30.34■■■□□ 2.45
TM2D3-209ENST00000560013 ERBB3P21860 1342 aa30.34■■■□□ 2.45
TM2D3-209ENST00000560013 HTATSF1O43719 755 aaKnown RBP30.34■■■□□ 2.45
TM2D3-209ENST00000560013 CCDC136Q96JN2 1154 aa30.33■■■□□ 2.45
TM2D3-209ENST00000560013 CANXP27824 592 aaKnown RBP30.31■■■□□ 2.44
TM2D3-209ENST00000560013 GNAT3A8MTJ3 354 aa30.31■■■□□ 2.44
TM2D3-209ENST00000560013 PDE3AQ14432 1141 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms