RNA–Protein interactions for RNA: ENST00000559833.5

TRIP4-208, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-208ENST00000559833 KRTAP3-2Q9BYR7 98 aa12.87□□□□□ -0.35
TRIP4-208ENST00000559833 HS3ST6Q96QI5 342 aa12.86□□□□□ -0.35
TRIP4-208ENST00000559833 SLIT2O94813 1529 aa12.86□□□□□ -0.35
TRIP4-208ENST00000559833 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
TRIP4-208ENST00000559833 SBNO1A3KN83 1393 aa12.85□□□□□ -0.35
TRIP4-208ENST00000559833 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.85□□□□□ -0.35
TRIP4-208ENST00000559833 PSME1Q06323 249 aa12.84□□□□□ -0.35
TRIP4-208ENST00000559833 SAFB2Q14151 953 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRIP4-208ENST00000559833 POGKQ9P215 609 aa12.84□□□□□ -0.35
TRIP4-208ENST00000559833 TRAK1Q9UPV9 953 aa12.84□□□□□ -0.35
TRIP4-208ENST00000559833 KDM2AQ9Y2K7 1162 aa12.84□□□□□ -0.35
TRIP4-208ENST00000559833 TNS3Q68CZ2 1445 aa12.84□□□□□ -0.35
TRIP4-208ENST00000559833 IFNLR1Q8IU57 520 aaPredicted RBP12.83□□□□□ -0.36
TRIP4-208ENST00000559833 GJD4Q96KN9 370 aaPredicted RBP12.83□□□□□ -0.36
TRIP4-208ENST00000559833 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
TRIP4-208ENST00000559833 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
TRIP4-208ENST00000559833 SRCAPQ6ZRS2 3230 aa12.83□□□□□ -0.36
TRIP4-208ENST00000559833 FAM205CA6NFA0 338 aa12.82□□□□□ -0.36
TRIP4-208ENST00000559833 WASLO00401 505 aaPredicted RBP12.82□□□□□ -0.36
TRIP4-208ENST00000559833 UNC5CLQ8IV45 518 aa12.82□□□□□ -0.36
TRIP4-208ENST00000559833 TRPM3Q9HCF6 1732 aaPredicted RBP12.82□□□□□ -0.36
TRIP4-208ENST00000559833 HOXB3P14651 431 aaPredicted RBP12.81□□□□□ -0.36
TRIP4-208ENST00000559833 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
TRIP4-208ENST00000559833 SPOCK2Q92563 424 aa12.81□□□□□ -0.36
TRIP4-208ENST00000559833 TULP4Q9NRJ4 1543 aa12.8□□□□□ -0.36
TRIP4-208ENST00000559833 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
TRIP4-208ENST00000559833 CABLES1Q8TDN4 633 aa12.8□□□□□ -0.36
TRIP4-208ENST00000559833 HIRIP3Q9BW71 556 aaPredicted RBP12.8□□□□□ -0.36
TRIP4-208ENST00000559833 GLI3P10071 1580 aa12.8□□□□□ -0.36
TRIP4-208ENST00000559833 ARHGEF10O15013 1369 aa12.8□□□□□ -0.36
TRIP4-208ENST00000559833 ATAD2Q6PL18 1390 aa12.8□□□□□ -0.36
TRIP4-208ENST00000559833 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
TRIP4-208ENST00000559833 ARHGEF28Q8N1W1 1705 aaKnown RBP12.79□□□□□ -0.36
TRIP4-208ENST00000559833 ABCA3Q99758 1704 aa12.79□□□□□ -0.36
TRIP4-208ENST00000559833 KIAA1210Q9ULL0 1709 aa12.79□□□□□ -0.36
TRIP4-208ENST00000559833 BOLA1Q9Y3E2 137 aa12.79□□□□□ -0.36
TRIP4-208ENST00000559833 MINK1Q8N4C8 1332 aaPredicted RBP12.79□□□□□ -0.36
TRIP4-208ENST00000559833 RALGAPBQ86X10 1494 aa12.78□□□□□ -0.36
TRIP4-208ENST00000559833 NWD2Q9ULI1 1742 aa12.78□□□□□ -0.36
TRIP4-208ENST00000559833 EIF3AQ14152 1382 aaKnown RBP12.78□□□□□ -0.36
TRIP4-208ENST00000559833 FAM83GA6ND36 823 aa12.77□□□□□ -0.37
TRIP4-208ENST00000559833 VPS72Q15906 364 aa12.77□□□□□ -0.37
TRIP4-208ENST00000559833 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
TRIP4-208ENST00000559833 CCDC125Q86Z20 511 aa12.76□□□□□ -0.37
TRIP4-208ENST00000559833 ATP7BP35670 1465 aa12.76□□□□□ -0.37
TRIP4-208ENST00000559833 PLCH1Q4KWH8 1693 aa12.76□□□□□ -0.37
TRIP4-208ENST00000559833 CRYBG1Q9Y4K1 1723 aa12.76□□□□□ -0.37
TRIP4-208ENST00000559833 NBPF1Q3BBV0 1214 aa12.75□□□□□ -0.37
TRIP4-208ENST00000559833 NUDT16Q96DE0 195 aaKnown RBP12.75□□□□□ -0.37
TRIP4-208ENST00000559833 GPRASP1Q5JY77 1395 aa12.74□□□□□ -0.37
TRIP4-208ENST00000559833 CDK19Q9BWU1 502 aa12.74□□□□□ -0.37
TRIP4-208ENST00000559833 BRWD3Q6RI45 1802 aa12.74□□□□□ -0.37
TRIP4-208ENST00000559833 POLR3AO14802 1390 aaPredicted RBP12.73□□□□□ -0.37
TRIP4-208ENST00000559833 PLEKHG3A1L390 1219 aa12.73□□□□□ -0.37
TRIP4-208ENST00000559833 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
TRIP4-208ENST00000559833 ITSN1Q15811 1721 aa12.73□□□□□ -0.37
TRIP4-208ENST00000559833 NRAPQ86VF7 1730 aa12.73□□□□□ -0.37
TRIP4-208ENST00000559833 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.37
TRIP4-208ENST00000559833 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.37
TRIP4-208ENST00000559833 HAP1P54257 671 aaPredicted RBP12.71□□□□□ -0.37
TRIP4-208ENST00000559833 SEPT12Q8IYM1 358 aa12.71□□□□□ -0.37
TRIP4-208ENST00000559833 NGDNQ8NEJ9 315 aaKnown RBP12.71□□□□□ -0.37
TRIP4-208ENST00000559833 G3V3G9 751 aa12.7□□□□□ -0.38
TRIP4-208ENST00000559833 HOXB1P14653 301 aaPredicted RBP12.7□□□□□ -0.38
TRIP4-208ENST00000559833 NBPF8Q3BBV2 869 aa12.7□□□□□ -0.38
TRIP4-208ENST00000559833 BTG4Q9NY30 223 aa12.7□□□□□ -0.38
TRIP4-208ENST00000559833 L3MBTL2Q969R5 705 aa12.69□□□□□ -0.38
TRIP4-208ENST00000559833 BLMP54132 1417 aaPredicted RBP12.69□□□□□ -0.38
TRIP4-208ENST00000559833 ACEP12821 1306 aa12.68□□□□□ -0.38
TRIP4-208ENST00000559833 PHRF1Q9P1Y6 1649 aaKnown RBP12.66□□□□□ -0.38
TRIP4-208ENST00000559833 SPATA31A5Q5VU36 1347 aa12.66□□□□□ -0.38
TRIP4-208ENST00000559833 SPATA31A7Q8IWB4 1347 aa12.66□□□□□ -0.38
TRIP4-208ENST00000559833 CENPJQ9HC77 1338 aaPredicted RBP12.66□□□□□ -0.38
TRIP4-208ENST00000559833 KRT27Q7Z3Y8 459 aa12.66□□□□□ -0.38
TRIP4-208ENST00000559833 EFCAB3Q8N7B9 438 aa12.66□□□□□ -0.38
TRIP4-208ENST00000559833 SIN3AQ96ST3 1273 aa12.65□□□□□ -0.38
TRIP4-208ENST00000559833 THSD7AQ9UPZ6 1657 aa12.64□□□□□ -0.39
TRIP4-208ENST00000559833 TRPM1Q7Z4N2 1603 aa12.64□□□□□ -0.39
TRIP4-208ENST00000559833 FAM98CQ17RN3 349 aaKnown RBP12.64□□□□□ -0.39
TRIP4-208ENST00000559833 CCDC9Q9Y3X0 531 aaKnown RBP12.64□□□□□ -0.39
TRIP4-208ENST00000559833 BRD4O60885 1362 aaPredicted RBP12.64□□□□□ -0.39
TRIP4-208ENST00000559833 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
TRIP4-208ENST00000559833 USP19O94966 1318 aa12.63□□□□□ -0.39
TRIP4-208ENST00000559833 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
TRIP4-208ENST00000559833 ZNF710Q8N1W2 664 aa12.63□□□□□ -0.39
TRIP4-208ENST00000559833 PRDM11Q9NQV5 511 aa12.63□□□□□ -0.39
TRIP4-208ENST00000559833 CPDO75976 1380 aa12.63□□□□□ -0.39
TRIP4-208ENST00000559833 SPATA31A1Q5TZJ5 1347 aa12.62□□□□□ -0.39
TRIP4-208ENST00000559833 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
TRIP4-208ENST00000559833 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
TRIP4-208ENST00000559833 QRICH2Q9H0J4 1663 aa12.62□□□□□ -0.39
TRIP4-208ENST00000559833 DEFB132Q7Z7B7 95 aa12.62□□□□□ -0.39
TRIP4-208ENST00000559833 ABTB2Q8N961 1025 aa12.62□□□□□ -0.39
TRIP4-208ENST00000559833 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
TRIP4-208ENST00000559833 NRKQ7Z2Y5 1582 aa12.61□□□□□ -0.39
TRIP4-208ENST00000559833 ZC3H6P61129 1189 aaKnown RBP12.61□□□□□ -0.39
TRIP4-208ENST00000559833 SRPK2P78362 688 aaKnown RBP12.61□□□□□ -0.39
TRIP4-208ENST00000559833 CHRNA2Q15822 529 aa12.61□□□□□ -0.39
TRIP4-208ENST00000559833 NUTM2GQ5VZR2 741 aa12.61□□□□□ -0.39
TRIP4-208ENST00000559833 TMEM92Q6UXU6 159 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms