RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 CRIPAKQ8N1N5 446 aa8.95□□□□□ -0.98
CASC4-207ENST00000559037 WASF2Q9Y6W5 498 aa8.95□□□□□ -0.98
CASC4-207ENST00000559037 ALDH1A1P00352 501 aa8.94□□□□□ -0.98
CASC4-207ENST00000559037 SMPD1P17405 629 aa8.94□□□□□ -0.98
CASC4-207ENST00000559037 FLIIQ13045 1269 aa8.94□□□□□ -0.98
CASC4-207ENST00000559037 ZBTB33Q86T24 672 aa8.94□□□□□ -0.98
CASC4-207ENST00000559037 EPS8L1Q8TE68 723 aa8.94□□□□□ -0.98
CASC4-207ENST00000559037 MAGEB6P1A0A0J9YX57 407 aa8.93□□□□□ -0.98
CASC4-207ENST00000559037 ADH1CP00326 375 aa8.93□□□□□ -0.98
CASC4-207ENST00000559037 C4orf48Q5BLP8 95 aa8.93□□□□□ -0.98
CASC4-207ENST00000559037 URB2Q14146 1524 aaKnown RBP8.92□□□□□ -0.98
CASC4-207ENST00000559037 SMCPP49901 116 aaPredicted RBP8.92□□□□□ -0.98
CASC4-207ENST00000559037 NR5A1Q13285 461 aa8.92□□□□□ -0.98
CASC4-207ENST00000559037 ERFEQ4G0M1 354 aa8.92□□□□□ -0.98
CASC4-207ENST00000559037 TRAF7Q6Q0C0 670 aa8.92□□□□□ -0.98
CASC4-207ENST00000559037 SLC10A4Q96EP9 437 aa8.92□□□□□ -0.98
CASC4-207ENST00000559037 SNRKQ9NRH2 765 aa8.92□□□□□ -0.98
CASC4-207ENST00000559037 TLL2Q9Y6L7 1015 aa8.92□□□□□ -0.98
CASC4-207ENST00000559037 J3QL48 77 aa8.91□□□□□ -0.98
CASC4-207ENST00000559037 MCM6Q14566 821 aa8.91□□□□□ -0.98
CASC4-207ENST00000559037 ZNF330Q9Y3S2 320 aaPredicted RBP8.91□□□□□ -0.98
CASC4-207ENST00000559037 ZBBXA8MT70 800 aa8.9□□□□□ -0.98
CASC4-207ENST00000559037 MCCD1P59942 119 aaPredicted RBP8.9□□□□□ -0.98
CASC4-207ENST00000559037 MYT1Q01538 1121 aa8.9□□□□□ -0.98
CASC4-207ENST00000559037 CARD14Q9BXL6 1004 aa8.9□□□□□ -0.98
CASC4-207ENST00000559037 NBPF20Q3BBV1 942 aa8.89□□□□□ -0.99
CASC4-207ENST00000559037 TRIM52Q96A61 297 aa8.89□□□□□ -0.99
CASC4-207ENST00000559037 VASH1Q7L8A9 365 aaPredicted RBP8.88□□□□□ -0.99
CASC4-207ENST00000559037 ADAM32Q8TC27 787 aa8.88□□□□□ -0.99
CASC4-207ENST00000559037 AXIN1O15169 862 aa8.87□□□□□ -0.99
CASC4-207ENST00000559037 NR1H3Q13133 447 aa8.87□□□□□ -0.99
CASC4-207ENST00000559037 ARID5BQ14865 1188 aa8.87□□□□□ -0.99
CASC4-207ENST00000559037 CCDC125Q86Z20 511 aa8.87□□□□□ -0.99
CASC4-207ENST00000559037 OCSTAMPQ9BR26 566 aa8.87□□□□□ -0.99
CASC4-207ENST00000559037 NNTQ13423 1086 aa8.86□□□□□ -0.99
CASC4-207ENST00000559037 ABCC8Q09428 1581 aa8.86□□□□□ -0.99
CASC4-207ENST00000559037 GPR37L1O60883 481 aa8.85□□□□□ -0.99
CASC4-207ENST00000559037 FBXO45P0C2W1 286 aa8.85□□□□□ -0.99
CASC4-207ENST00000559037 GRM5P41594 1212 aa8.85□□□□□ -0.99
CASC4-207ENST00000559037 DZIP3Q86Y13 1208 aaKnown RBP8.85□□□□□ -0.99
CASC4-207ENST00000559037 HPS1Q92902 700 aa8.85□□□□□ -0.99
CASC4-207ENST00000559037 AAASQ9NRG9 546 aa8.85□□□□□ -0.99
CASC4-207ENST00000559037 TOPBP1Q92547 1522 aa8.85□□□□□ -0.99
CASC4-207ENST00000559037 FSHRP23945 695 aa8.84□□□□□ -0.99
CASC4-207ENST00000559037 DHX9Q08211 1270 aaKnown RBP8.84□□□□□ -0.99
CASC4-207ENST00000559037 WASHC4Q2M389 1173 aa8.84□□□□□ -0.99
CASC4-207ENST00000559037 WWC1Q8IX03 1113 aa8.84□□□□□ -0.99
CASC4-207ENST00000559037 SEPT12Q8IYM1 358 aa8.84□□□□□ -0.99
CASC4-207ENST00000559037 TBC1D2BQ9UPU7 963 aa8.84□□□□□ -0.99
CASC4-207ENST00000559037 KCTD15Q96SI1 283 aaPredicted RBP8.83□□□□□ -1
CASC4-207ENST00000559037 EMILIN1Q9Y6C2 1016 aa8.83□□□□□ -1
CASC4-207ENST00000559037 DNMBPQ6XZF7 1577 aa8.82□□□□□ -1
CASC4-207ENST00000559037 RAD21O60216 631 aa8.82□□□□□ -1
CASC4-207ENST00000559037 CCDC116Q8IYX3 515 aa8.82□□□□□ -1
CASC4-207ENST00000559037 ESPNB1AK53 854 aa8.8□□□□□ -1
CASC4-207ENST00000559037 SUPT5HO00267 1087 aaKnown RBP8.8□□□□□ -1
CASC4-207ENST00000559037 CAPN5O15484 640 aaPredicted RBP8.8□□□□□ -1
CASC4-207ENST00000559037 UBTFP17480 764 aaKnown RBP8.8□□□□□ -1
CASC4-207ENST00000559037 EIF4G2P78344 907 aaKnown RBP eCLIP8.8□□□□□ -1
CASC4-207ENST00000559037 RNF20Q5VTR2 975 aa8.8□□□□□ -1
CASC4-207ENST00000559037 GDPD2Q9HCC8 539 aa8.8□□□□□ -1
CASC4-207ENST00000559037 PGPEP1Q9NXJ5 209 aa8.8□□□□□ -1
CASC4-207ENST00000559037 PCDHB9Q9Y5E1 797 aa8.8□□□□□ -1
CASC4-207ENST00000559037 IFT140Q96RY7 1462 aa8.8□□□□□ -1
CASC4-207ENST00000559037 TARBP1Q13395 1621 aaKnown RBP8.8□□□□□ -1
CASC4-207ENST00000559037 ZNF608Q9ULD9 1512 aaPredicted RBP8.8□□□□□ -1
CASC4-207ENST00000559037 TIMP2P16035 220 aa8.79□□□□□ -1
CASC4-207ENST00000559037 SOX11P35716 441 aa8.79□□□□□ -1
CASC4-207ENST00000559037 WDR4P57081 412 aaKnown RBP8.79□□□□□ -1
CASC4-207ENST00000559037 KLF16Q9BXK1 252 aaPredicted RBP8.79□□□□□ -1
CASC4-207ENST00000559037 COG6Q9Y2V7 657 aa8.79□□□□□ -1
CASC4-207ENST00000559037 ST8SIA5O15466 376 aa8.78□□□□□ -1
CASC4-207ENST00000559037 NR3C2P08235 984 aa8.78□□□□□ -1
CASC4-207ENST00000559037 ABL2P42684 1182 aa8.78□□□□□ -1
CASC4-207ENST00000559037 IRF5Q13568 498 aa8.78□□□□□ -1
CASC4-207ENST00000559037 INTS6LQ5JSJ4 861 aaKnown RBP8.78□□□□□ -1
CASC4-207ENST00000559037 ZIC2O95409 532 aaPredicted RBP8.77□□□□□ -1.01
CASC4-207ENST00000559037 SENP2Q9HC62 589 aa8.77□□□□□ -1.01
CASC4-207ENST00000559037 KIFC2Q96AC6 838 aa8.76□□□□□ -1.01
CASC4-207ENST00000559037 ATP13A2Q9NQ11 1180 aa8.76□□□□□ -1.01
CASC4-207ENST00000559037 POLA1P09884 1462 aaPredicted RBP8.76□□□□□ -1.01
CASC4-207ENST00000559037 PPP1R26Q5T8A7 1209 aaPredicted RBP8.75□□□□□ -1.01
CASC4-207ENST00000559037 ITPKCQ96DU7 683 aa8.75□□□□□ -1.01
CASC4-207ENST00000559037 EIF4G3O43432 1585 aaKnown RBP8.74□□□□□ -1.01
CASC4-207ENST00000559037 UPP2O95045 317 aa8.74□□□□□ -1.01
CASC4-207ENST00000559037 SCARF1Q14162 830 aa8.74□□□□□ -1.01
CASC4-207ENST00000559037 AQRO60306 1485 aaKnown RBP eCLIP8.74□□□□□ -1.018e-8■■■■■ 39.5
CASC4-207ENST00000559037 CUX1P39880 1505 aa8.74□□□□□ -1.01
CASC4-207ENST00000559037 RAD54L2Q9Y4B4 1467 aa8.73□□□□□ -1.01
CASC4-207ENST00000559037 MEIOBQ8N635 442 aa8.73□□□□□ -1.01
CASC4-207ENST00000559037 SOGA1O94964 1423 aa8.72□□□□□ -1.01
CASC4-207ENST00000559037 ZFAND3Q9H8U3 227 aa8.72□□□□□ -1.01
CASC4-207ENST00000559037 CHD1O14646 1710 aa8.71□□□□□ -1.01
CASC4-207ENST00000559037 ERVH48-1M5A8F1 160 aa8.71□□□□□ -1.02
CASC4-207ENST00000559037 VAC14Q08AM6 782 aa8.71□□□□□ -1.02
CASC4-207ENST00000559037 ZNF787Q6DD87 383 aa8.71□□□□□ -1.02
CASC4-207ENST00000559037 MRPL14Q6P1L8 145 aaKnown RBP8.71□□□□□ -1.02
CASC4-207ENST00000559037 Q6ZVU0 165 aa8.71□□□□□ -1.02
CASC4-207ENST00000559037 TRIM47Q96LD4 638 aa8.71□□□□□ -1.02
CASC4-207ENST00000559037 TSEN34Q9BSV6 310 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms