RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-208ENST00000558943 BAP1Q92560 729 aa8.62□□□□□ -1.03
SPG21-208ENST00000558943 COL17A1Q9UMD9 1497 aaPredicted RBP8.62□□□□□ -1.03
SPG21-208ENST00000558943 PTPRGP23470 1445 aa8.62□□□□□ -1.03
SPG21-208ENST00000558943 CFAP99D6REC4 459 aa8.61□□□□□ -1.03
SPG21-208ENST00000558943 CAPN5O15484 640 aaPredicted RBP8.61□□□□□ -1.03
SPG21-208ENST00000558943 F12P00748 615 aaPredicted RBP8.61□□□□□ -1.03
SPG21-208ENST00000558943 FAM174AQ8TBP5 190 aa8.61□□□□□ -1.03
SPG21-208ENST00000558943 PCDHB15Q9Y5E8 787 aa8.61□□□□□ -1.03
SPG21-208ENST00000558943 PLB1Q6P1J6 1458 aa8.61□□□□□ -1.03
SPG21-208ENST00000558943 TOP2BQ02880 1626 aa8.61□□□□□ -1.03
SPG21-208ENST00000558943 CTHP32929 405 aa8.6□□□□□ -1.03
SPG21-208ENST00000558943 LINC01559Q495D7 138 aa8.6□□□□□ -1.03
SPG21-208ENST00000558943 ARMC2Q8NEN0 867 aa8.6□□□□□ -1.03
SPG21-208ENST00000558943 RSPH6AQ9H0K4 717 aa8.6□□□□□ -1.03
SPG21-208ENST00000558943 ASXL2Q76L83 1435 aa8.6□□□□□ -1.03
SPG21-208ENST00000558943 WIPF1O43516 503 aa8.59□□□□□ -1.03
SPG21-208ENST00000558943 NFX1Q12986 1120 aaKnown RBP8.59□□□□□ -1.03
SPG21-208ENST00000558943 MYSM1Q5VVJ2 828 aa8.59□□□□□ -1.03
SPG21-208ENST00000558943 TEX14Q8IWB6 1497 aa8.58□□□□□ -1.04
SPG21-208ENST00000558943 SNRPBP14678 240 aaKnown RBP8.58□□□□□ -1.04
SPG21-208ENST00000558943 NPAS3Q8IXF0 933 aa8.58□□□□□ -1.04
SPG21-208ENST00000558943 CDK15Q96Q40 435 aa8.58□□□□□ -1.04
SPG21-208ENST00000558943 TERTO14746 1132 aaKnown RBP8.57□□□□□ -1.04
SPG21-208ENST00000558943 LILRB3O75022 631 aa8.57□□□□□ -1.04
SPG21-208ENST00000558943 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
SPG21-208ENST00000558943 ERICH3Q5RHP9 1530 aa8.57□□□□□ -1.04
SPG21-208ENST00000558943 GLI2P10070 1586 aa8.56□□□□□ -1.04
SPG21-208ENST00000558943 ADH1CP00326 375 aa8.56□□□□□ -1.04
SPG21-208ENST00000558943 BPHLQ86WA6 291 aaPredicted RBP8.56□□□□□ -1.04
SPG21-208ENST00000558943 TLL2Q9Y6L7 1015 aa8.56□□□□□ -1.04
SPG21-208ENST00000558943 ABCC2Q92887 1545 aa8.55□□□□□ -1.04
SPG21-208ENST00000558943 NUTM2BA6NNL0 878 aaPredicted RBP8.55□□□□□ -1.04
SPG21-208ENST00000558943 NUTM2EB1AL46 878 aaPredicted RBP8.55□□□□□ -1.04
SPG21-208ENST00000558943 CLK2P49760 499 aaKnown RBP8.55□□□□□ -1.04
SPG21-208ENST00000558943 INSM1Q01101 510 aaPredicted RBP8.55□□□□□ -1.04
SPG21-208ENST00000558943 NNTQ13423 1086 aa8.55□□□□□ -1.04
SPG21-208ENST00000558943 NBPF14Q5TI25 921 aa8.55□□□□□ -1.04
SPG21-208ENST00000558943 NUTM2DQ5VT03 806 aaPredicted RBP8.55□□□□□ -1.04
SPG21-208ENST00000558943 NUTM2AQ8IVF1 878 aaPredicted RBP8.55□□□□□ -1.04
SPG21-208ENST00000558943 GPKOWQ92917 476 aaPredicted RBP eCLIP8.55□□□□□ -1.04
SPG21-208ENST00000558943 SLC24A3Q9HC58 644 aa8.55□□□□□ -1.04
SPG21-208ENST00000558943 NR5A1Q13285 461 aa8.54□□□□□ -1.04
SPG21-208ENST00000558943 TRIM46Q7Z4K8 759 aa8.54□□□□□ -1.04
SPG21-208ENST00000558943 CABLES1Q8TDN4 633 aa8.54□□□□□ -1.04
SPG21-208ENST00000558943 SLC16A10Q8TF71 515 aa8.54□□□□□ -1.04
SPG21-208ENST00000558943 MAP10Q9P2G4 905 aa8.54□□□□□ -1.04
SPG21-208ENST00000558943 LIMD1Q9UGP4 676 aa8.54□□□□□ -1.04
SPG21-208ENST00000558943 KIAA0586Q9BVV6 1533 aa8.54□□□□□ -1.04
SPG21-208ENST00000558943 TNIKQ9UKE5 1360 aa8.53□□□□□ -1.04
SPG21-208ENST00000558943 CSPP1Q1MSJ5 1256 aa8.53□□□□□ -1.04
SPG21-208ENST00000558943 CARMIL2Q6F5E8 1435 aa8.53□□□□□ -1.04
SPG21-208ENST00000558943 QPCTQ16769 361 aa8.52□□□□□ -1.05
SPG21-208ENST00000558943 NXF1Q9UBU9 619 aaKnown RBP8.52□□□□□ -1.05
SPG21-208ENST00000558943 EPRSP07814 1512 aaKnown RBP8.52□□□□□ -1.05
SPG21-208ENST00000558943 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
SPG21-208ENST00000558943 TIMP2P16035 220 aa8.51□□□□□ -1.05
SPG21-208ENST00000558943 SCARF1Q14162 830 aa8.51□□□□□ -1.05
SPG21-208ENST00000558943 STK17AQ9UEE5 414 aa8.51□□□□□ -1.05
SPG21-208ENST00000558943 MAP4K5Q9Y4K4 846 aa8.51□□□□□ -1.05
SPG21-208ENST00000558943 ARID4BQ4LE39 1312 aaPredicted RBP8.51□□□□□ -1.05
SPG21-208ENST00000558943 PTPRMP28827 1452 aa8.51□□□□□ -1.05
SPG21-208ENST00000558943 PPRC1Q5VV67 1664 aaKnown RBP8.5□□□□□ -1.05
SPG21-208ENST00000558943 PER1O15534 1290 aaPredicted RBP8.5□□□□□ -1.05
SPG21-208ENST00000558943 BMP1P13497 986 aa8.5□□□□□ -1.05
SPG21-208ENST00000558943 HSPA2P54652 639 aa8.5□□□□□ -1.05
SPG21-208ENST00000558943 WDR4P57081 412 aaKnown RBP8.5□□□□□ -1.05
SPG21-208ENST00000558943 AGERQ15109 404 aa8.5□□□□□ -1.05
SPG21-208ENST00000558943 MRPL14Q6P1L8 145 aaKnown RBP8.5□□□□□ -1.05
SPG21-208ENST00000558943 TRMT44Q8IYL2 757 aaKnown RBP8.5□□□□□ -1.05
SPG21-208ENST00000558943 FOXJ1Q92949 421 aa8.5□□□□□ -1.05
SPG21-208ENST00000558943 C1QTNF2Q9BXJ5 285 aa8.5□□□□□ -1.05
SPG21-208ENST00000558943 KLF16Q9BXK1 252 aaPredicted RBP8.5□□□□□ -1.05
SPG21-208ENST00000558943 UACAQ9BZF9 1416 aa8.49□□□□□ -1.05
SPG21-208ENST00000558943 SH3RF1Q7Z6J0 888 aa8.49□□□□□ -1.05
SPG21-208ENST00000558943 TSC1Q92574 1164 aa8.49□□□□□ -1.05
SPG21-208ENST00000558943 DDRGK1Q96HY6 314 aa8.48□□□□□ -1.05
SPG21-208ENST00000558943 ZFP42Q96MM3 310 aa8.48□□□□□ -1.05
SPG21-208ENST00000558943 CD109Q6YHK3 1445 aa8.47□□□□□ -1.05
SPG21-208ENST00000558943 UHRF1BP1LA0JNW5 1464 aa8.47□□□□□ -1.05
SPG21-208ENST00000558943 C4orf48Q5BLP8 95 aa8.47□□□□□ -1.05
SPG21-208ENST00000558943 SH3BP5LQ7L8J4 393 aa8.47□□□□□ -1.05
SPG21-208ENST00000558943 IRF7Q92985 503 aa8.47□□□□□ -1.05
SPG21-208ENST00000558943 ZC3H4Q9UPT8 1303 aaKnown RBP8.47□□□□□ -1.05
SPG21-208ENST00000558943 SKIV2LQ15477 1246 aaKnown RBP8.46□□□□□ -1.06
SPG21-208ENST00000558943 SH3D19Q5HYK7 790 aa8.46□□□□□ -1.06
SPG21-208ENST00000558943 RTL5Q5HYW3 569 aaPredicted RBP8.46□□□□□ -1.06
SPG21-208ENST00000558943 PCF11O94913 1555 aaKnown RBP8.45□□□□□ -1.06
SPG21-208ENST00000558943 MAP3K4Q9Y6R4 1608 aa8.45□□□□□ -1.06
SPG21-208ENST00000558943 GRM5P41594 1212 aa8.45□□□□□ -1.06
SPG21-208ENST00000558943 ARID5BQ14865 1188 aa8.45□□□□□ -1.06
SPG21-208ENST00000558943 CDV3Q9UKY7 258 aaKnown RBP8.45□□□□□ -1.06
SPG21-208ENST00000558943 H3BM21 787 aa8.44□□□□□ -1.06
SPG21-208ENST00000558943 ZIC2O95409 532 aaPredicted RBP8.44□□□□□ -1.06
SPG21-208ENST00000558943 PPP2R2DQ66LE6 453 aa8.44□□□□□ -1.06
SPG21-208ENST00000558943 PDXDC2PQ6P474 469 aa8.44□□□□□ -1.06
SPG21-208ENST00000558943 IGF1RP08069 1367 aa8.44□□□□□ -1.06
SPG21-208ENST00000558943 KDM5BQ9UGL1 1544 aa8.44□□□□□ -1.06
SPG21-208ENST00000558943 UPP2O95045 317 aa8.43□□□□□ -1.06
SPG21-208ENST00000558943 BCANQ96GW7 911 aa8.43□□□□□ -1.06
SPG21-208ENST00000558943 POLR3EQ9NVU0 708 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms