RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 MED14O60244 1454 aa11.24□□□□□ -0.61
EXD1-204ENST00000558881 FER1L4A9Z1Z3 1794 aa11.24□□□□□ -0.61
EXD1-204ENST00000558881 PLIN1O60240 522 aa11.24□□□□□ -0.61
EXD1-204ENST00000558881 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
EXD1-204ENST00000558881 PPIP5K1Q6PFW1 1433 aa11.24□□□□□ -0.61
EXD1-204ENST00000558881 ARHGAP23Q9P227 1491 aa11.24□□□□□ -0.61
EXD1-204ENST00000558881 PRR36Q9H6K5 1346 aa11.24□□□□□ -0.61
EXD1-204ENST00000558881 NEUROD2Q15784 382 aa11.24□□□□□ -0.61
EXD1-204ENST00000558881 CENPQQ7L2Z9 268 aaPredicted RBP11.24□□□□□ -0.61
EXD1-204ENST00000558881 SKAP1Q86WV1 359 aa11.24□□□□□ -0.61
EXD1-204ENST00000558881 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
EXD1-204ENST00000558881 AMOTL2Q9Y2J4 779 aa11.24□□□□□ -0.61
EXD1-204ENST00000558881 RRP7AQ9Y3A4 280 aaKnown RBP11.24□□□□□ -0.61
EXD1-204ENST00000558881 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
EXD1-204ENST00000558881 SLIT1O75093 1534 aa11.23□□□□□ -0.61
EXD1-204ENST00000558881 NUTM2FA1L443 756 aa11.23□□□□□ -0.61
EXD1-204ENST00000558881 TRMT2AQ8IZ69 625 aaKnown RBP11.23□□□□□ -0.61
EXD1-204ENST00000558881 RUNDC1Q96C34 613 aa11.23□□□□□ -0.61
EXD1-204ENST00000558881 CRBNQ96SW2 442 aa11.23□□□□□ -0.61
EXD1-204ENST00000558881 ZRANB1Q9UGI0 708 aa11.23□□□□□ -0.61
EXD1-204ENST00000558881 TBX22Q9Y458 520 aa11.23□□□□□ -0.61
EXD1-204ENST00000558881 SHPRHQ149N8 1683 aa11.23□□□□□ -0.61
EXD1-204ENST00000558881 CPS1P31327 1500 aa11.23□□□□□ -0.61
EXD1-204ENST00000558881 U2AF1L5P0DN76 240 aaPredicted RBP11.23□□□□□ -0.61
EXD1-204ENST00000558881 U2AF1Q01081 240 aaKnown RBP eCLIP11.23□□□□□ -0.61
EXD1-204ENST00000558881 TCP11L2Q8N4U5 519 aa11.23□□□□□ -0.61
EXD1-204ENST00000558881 CPSF1Q10570 1443 aaKnown RBP11.22□□□□□ -0.61
EXD1-204ENST00000558881 ATP7BP35670 1465 aa11.22□□□□□ -0.61
EXD1-204ENST00000558881 NME9Q86XW9 330 aa11.21□□□□□ -0.61
EXD1-204ENST00000558881 WWC1Q8IX03 1113 aa11.21□□□□□ -0.61
EXD1-204ENST00000558881 RASEFQ8IZ41 740 aa11.21□□□□□ -0.61
EXD1-204ENST00000558881 KNDC1Q76NI1 1749 aa11.21□□□□□ -0.62
EXD1-204ENST00000558881 FSD2A1L4K1 749 aa11.21□□□□□ -0.62
EXD1-204ENST00000558881 U2SURPO15042 1029 aaKnown RBP11.2□□□□□ -0.62
EXD1-204ENST00000558881 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
EXD1-204ENST00000558881 XRCC6P12956 609 aaKnown RBP eCLIP11.2□□□□□ -0.62
EXD1-204ENST00000558881 POLKQ9UBT6 870 aa11.2□□□□□ -0.62
EXD1-204ENST00000558881 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.19□□□□□ -0.62
EXD1-204ENST00000558881 NGEFQ8N5V2 710 aa11.19□□□□□ -0.62
EXD1-204ENST00000558881 EDC4Q6P2E9 1401 aaKnown RBP11.19□□□□□ -0.62
EXD1-204ENST00000558881 E9PSI1 815 aa11.19□□□□□ -0.62
EXD1-204ENST00000558881 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
EXD1-204ENST00000558881 COL3A1P02461 1466 aaPredicted RBP11.18□□□□□ -0.62
EXD1-204ENST00000558881 CHRM1P11229 460 aaPredicted RBP11.18□□□□□ -0.62
EXD1-204ENST00000558881 C20orf194Q5TEA3 1177 aa11.18□□□□□ -0.62
EXD1-204ENST00000558881 PLEKHF1Q96S99 279 aa11.18□□□□□ -0.62
EXD1-204ENST00000558881 BCL11BQ9C0K0 894 aaPredicted RBP11.18□□□□□ -0.62
EXD1-204ENST00000558881 GOLGA6L3A6NEY3 463 aa11.18□□□□□ -0.62
EXD1-204ENST00000558881 DIAPH1O60610 1272 aaKnown RBP11.18□□□□□ -0.62
EXD1-204ENST00000558881 PDCL3Q9H2J4 239 aa11.18□□□□□ -0.62
EXD1-204ENST00000558881 PNPLA6Q8IY17 1366 aa11.17□□□□□ -0.62
EXD1-204ENST00000558881 IQSEC2Q5JU85 1478 aa11.17□□□□□ -0.62
EXD1-204ENST00000558881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.17□□□□□ -0.62
EXD1-204ENST00000558881 PYGBP11216 843 aa11.17□□□□□ -0.62
EXD1-204ENST00000558881 REM2Q8IYK8 340 aaPredicted RBP11.17□□□□□ -0.62
EXD1-204ENST00000558881 ZFP91Q96JP5 570 aaPredicted RBP11.17□□□□□ -0.62
EXD1-204ENST00000558881 EMILIN1Q9Y6C2 1016 aa11.17□□□□□ -0.62
EXD1-204ENST00000558881 ACEP12821 1306 aa11.17□□□□□ -0.62
EXD1-204ENST00000558881 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
EXD1-204ENST00000558881 PLEKHG3A1L390 1219 aa11.16□□□□□ -0.62
EXD1-204ENST00000558881 KCNA6P17658 529 aa11.16□□□□□ -0.62
EXD1-204ENST00000558881 CALD1Q05682 793 aaKnown RBP11.16□□□□□ -0.62
EXD1-204ENST00000558881 CDC42BPGQ6DT37 1551 aa11.16□□□□□ -0.62
EXD1-204ENST00000558881 TPM2P07951 284 aa11.16□□□□□ -0.62
EXD1-204ENST00000558881 BECN1Q14457 450 aa11.16□□□□□ -0.62
EXD1-204ENST00000558881 USP19O94966 1318 aa11.16□□□□□ -0.62
EXD1-204ENST00000558881 PMFBP1Q8TBY8 1022 aa11.15□□□□□ -0.62
EXD1-204ENST00000558881 COG3Q96JB2 828 aa11.15□□□□□ -0.62
EXD1-204ENST00000558881 ANTXR1Q9H6X2 564 aa11.15□□□□□ -0.62
EXD1-204ENST00000558881 CEP170BQ9Y4F5 1589 aaPredicted RBP11.15□□□□□ -0.62
EXD1-204ENST00000558881 ANKRD26Q9UPS8 1709 aa11.15□□□□□ -0.62
EXD1-204ENST00000558881 BCAR3O75815 825 aa11.15□□□□□ -0.62
EXD1-204ENST00000558881 RRS1Q15050 365 aaKnown RBP11.15□□□□□ -0.62
EXD1-204ENST00000558881 TTC21BQ7Z4L5 1316 aa11.15□□□□□ -0.62
EXD1-204ENST00000558881 ANKLE2Q86XL3 938 aa11.15□□□□□ -0.62
EXD1-204ENST00000558881 KIF20BQ96Q89 1820 aa11.14□□□□□ -0.63
EXD1-204ENST00000558881 NKTRP30414 1462 aaKnown RBP11.14□□□□□ -0.63
EXD1-204ENST00000558881 CCDC27Q2M243 656 aa11.14□□□□□ -0.63
EXD1-204ENST00000558881 WDR63Q8IWG1 891 aa11.14□□□□□ -0.63
EXD1-204ENST00000558881 ADGRB2O60241 1585 aa11.14□□□□□ -0.63
EXD1-204ENST00000558881 PTCH1Q13635 1447 aa11.14□□□□□ -0.63
EXD1-204ENST00000558881 TMPOP42166 694 aaKnown RBP11.14□□□□□ -0.63
EXD1-204ENST00000558881 RBM33Q96EV2 1170 aaKnown RBP11.13□□□□□ -0.63
EXD1-204ENST00000558881 MRE11P49959 708 aa11.12□□□□□ -0.63
EXD1-204ENST00000558881 PANK2Q9BZ23 570 aa11.12□□□□□ -0.63
EXD1-204ENST00000558881 TRIM35Q9UPQ4 493 aa11.12□□□□□ -0.63
EXD1-204ENST00000558881 ADAMTSL3P82987 1691 aa11.12□□□□□ -0.63
EXD1-204ENST00000558881 ESPNB1AK53 854 aa11.12□□□□□ -0.63
EXD1-204ENST00000558881 IL13P35225 146 aa11.12□□□□□ -0.63
EXD1-204ENST00000558881 PRDM4Q9UKN5 801 aa11.12□□□□□ -0.63
EXD1-204ENST00000558881 ISY1Q9ULR0 285 aaKnown RBP11.12□□□□□ -0.63
EXD1-204ENST00000558881 AATKQ6ZMQ8 1374 aa11.12□□□□□ -0.63
EXD1-204ENST00000558881 HMOX1P09601 288 aa11.11□□□□□ -0.63
EXD1-204ENST00000558881 SGIP1Q9BQI5 828 aa11.11□□□□□ -0.63
EXD1-204ENST00000558881 DIP2AQ14689 1571 aa11.11□□□□□ -0.63
EXD1-204ENST00000558881 MAPK8IP3Q9UPT6 1336 aa11.11□□□□□ -0.63
EXD1-204ENST00000558881 FCHSD2O94868 740 aa11.11□□□□□ -0.63
EXD1-204ENST00000558881 USP6P35125 1406 aa11.11□□□□□ -0.63
EXD1-204ENST00000558881 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
EXD1-204ENST00000558881 RIPK4P57078 832 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms