RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 TMEM63CQ9P1W3 806 aa19.77■□□□□ 0.76
HMBOX1-212ENST00000558662 INO80Q9ULG1 1556 aaPredicted RBP19.76■□□□□ 0.75
HMBOX1-212ENST00000558662 MCM2P49736 904 aa19.76■□□□□ 0.75
HMBOX1-212ENST00000558662 SLC20A2Q08357 652 aa19.76■□□□□ 0.75
HMBOX1-212ENST00000558662 CREBRFQ8IUR6 639 aa19.76■□□□□ 0.75
HMBOX1-212ENST00000558662 FOXD4L1Q9NU39 408 aa19.76■□□□□ 0.75
HMBOX1-212ENST00000558662 TRAPPC8Q9Y2L5 1435 aa19.76■□□□□ 0.75
HMBOX1-212ENST00000558662 PIK3R4Q99570 1358 aa19.76■□□□□ 0.75
HMBOX1-212ENST00000558662 VGFO15240 615 aaPredicted RBP19.75■□□□□ 0.75
HMBOX1-212ENST00000558662 ABCA6Q8N139 1617 aa19.75■□□□□ 0.75
HMBOX1-212ENST00000558662 MAP3K4Q9Y6R4 1608 aa19.75■□□□□ 0.75
HMBOX1-212ENST00000558662 SYCE3A1L190 88 aa19.75■□□□□ 0.75
HMBOX1-212ENST00000558662 TMEM57Q8N5G2 664 aa19.75■□□□□ 0.75
HMBOX1-212ENST00000558662 SSH1Q8WYL5 1049 aa19.75■□□□□ 0.75
HMBOX1-212ENST00000558662 ATAD2Q6PL18 1390 aa19.74■□□□□ 0.75
HMBOX1-212ENST00000558662 SYCP2Q9BX26 1530 aa19.74■□□□□ 0.75
HMBOX1-212ENST00000558662 NEUROD2Q15784 382 aa19.74■□□□□ 0.75
HMBOX1-212ENST00000558662 ARHGAP45Q92619 1136 aa19.74■□□□□ 0.75
HMBOX1-212ENST00000558662 ANKRD36BQ8N2N9 1353 aa19.74■□□□□ 0.75
HMBOX1-212ENST00000558662 CCDC66A2RUB6 948 aa19.73■□□□□ 0.75
HMBOX1-212ENST00000558662 CTIFO43310 598 aaKnown RBP19.73■□□□□ 0.75
HMBOX1-212ENST00000558662 PUS7Q96PZ0 661 aaKnown RBP19.73■□□□□ 0.75
HMBOX1-212ENST00000558662 ATP2B3Q16720 1220 aa19.72■□□□□ 0.75
HMBOX1-212ENST00000558662 BCL2L12Q9HB09 334 aa19.72■□□□□ 0.75
HMBOX1-212ENST00000558662 TMEM51Q9NW97 253 aa19.72■□□□□ 0.75
HMBOX1-212ENST00000558662 RRP7AQ9Y3A4 280 aaKnown RBP19.72■□□□□ 0.75
HMBOX1-212ENST00000558662 SETBP1Q9Y6X0 1596 aa19.72■□□□□ 0.75
HMBOX1-212ENST00000558662 NSD3Q9BZ95 1437 aa19.72■□□□□ 0.75
HMBOX1-212ENST00000558662 INTS3Q68E01 1043 aaKnown RBP19.72■□□□□ 0.75
HMBOX1-212ENST00000558662 CASC1Q6TDU7 716 aa19.72■□□□□ 0.75
HMBOX1-212ENST00000558662 NOB1Q9ULX3 412 aaKnown RBP19.72■□□□□ 0.75
HMBOX1-212ENST00000558662 KIF24Q5T7B8 1368 aa19.72■□□□□ 0.75
HMBOX1-212ENST00000558662 EXOSC9Q06265 439 aaKnown RBP19.7■□□□□ 0.74
HMBOX1-212ENST00000558662 ANKRD45Q5TZF3 282 aa19.7■□□□□ 0.74
HMBOX1-212ENST00000558662 RBM42Q9BTD8 480 aaKnown RBP19.7■□□□□ 0.74
HMBOX1-212ENST00000558662 USP26Q9BXU7 913 aa19.7■□□□□ 0.74
HMBOX1-212ENST00000558662 NAP1L2Q9ULW6 460 aaPredicted RBP19.7■□□□□ 0.74
HMBOX1-212ENST00000558662 ZC3H13Q5T200 1668 aaKnown RBP19.7■□□□□ 0.74
HMBOX1-212ENST00000558662 PPIP5K1Q6PFW1 1433 aa19.7■□□□□ 0.74
HMBOX1-212ENST00000558662 TET3O43151 1660 aa19.69■□□□□ 0.74
HMBOX1-212ENST00000558662 RBM27Q9P2N5 1060 aaKnown RBP19.69■□□□□ 0.74
HMBOX1-212ENST00000558662 OSCARQ8IYS5 282 aa19.68■□□□□ 0.74
HMBOX1-212ENST00000558662 ARID3AQ99856 593 aa19.68■□□□□ 0.74
HMBOX1-212ENST00000558662 REC8O95072 547 aa19.67■□□□□ 0.74
HMBOX1-212ENST00000558662 ZDHHC9Q9Y397 364 aa19.67■□□□□ 0.74
HMBOX1-212ENST00000558662 PTCH1Q13635 1447 aa19.67■□□□□ 0.74
HMBOX1-212ENST00000558662 IFT172Q9UG01 1749 aa19.67■□□□□ 0.74
HMBOX1-212ENST00000558662 INTS4Q96HW7 963 aaKnown RBP19.67■□□□□ 0.74
HMBOX1-212ENST00000558662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.742e-10■□□□□ 10.7
HMBOX1-212ENST00000558662 TSPYL1Q9H0U9 437 aa19.67■□□□□ 0.74
HMBOX1-212ENST00000558662 GOLGA6L6A8MZA4 724 aa19.66■□□□□ 0.74
HMBOX1-212ENST00000558662 PDIA4P13667 645 aaKnown RBP19.66■□□□□ 0.74
HMBOX1-212ENST00000558662 USP25Q9UHP3 1055 aa19.66■□□□□ 0.74
HMBOX1-212ENST00000558662 BRD1O95696 1058 aa19.65■□□□□ 0.74
HMBOX1-212ENST00000558662 CGNQ9P2M7 1197 aaKnown RBP19.65■□□□□ 0.74
HMBOX1-212ENST00000558662 DEPDC5O75140 1603 aa19.65■□□□□ 0.74
HMBOX1-212ENST00000558662 CDK11BP21127 795 aaKnown RBP19.65■□□□□ 0.74
HMBOX1-212ENST00000558662 NRXN1Q9ULB1 1477 aa19.65■□□□□ 0.74
HMBOX1-212ENST00000558662 ZBTB7BO15156 539 aaPredicted RBP19.64■□□□□ 0.73
HMBOX1-212ENST00000558662 MTHFSP49914 203 aa19.64■□□□□ 0.73
HMBOX1-212ENST00000558662 ZNF771Q7L3S4 317 aaPredicted RBP19.64■□□□□ 0.73
HMBOX1-212ENST00000558662 TMEM87AQ8NBN3 555 aa19.64■□□□□ 0.73
HMBOX1-212ENST00000558662 ARHGAP5Q13017 1502 aa19.63■□□□□ 0.73
HMBOX1-212ENST00000558662 TAF7LQ5H9L4 462 aa19.62■□□□□ 0.73
HMBOX1-212ENST00000558662 TTC22Q5TAA0 569 aa19.62■□□□□ 0.73
HMBOX1-212ENST00000558662 KIAA1524Q8TCG1 905 aa19.62■□□□□ 0.73
HMBOX1-212ENST00000558662 DNAJC2Q99543 621 aaKnown RBP19.62■□□□□ 0.73
HMBOX1-212ENST00000558662 TMPOP42166 694 aaKnown RBP19.62■□□□□ 0.73
HMBOX1-212ENST00000558662 CUL4AQ13619 759 aa19.62■□□□□ 0.73
HMBOX1-212ENST00000558662 CCDC183Q5T5S1 534 aa19.61■□□□□ 0.73
HMBOX1-212ENST00000558662 RNF214Q8ND24 703 aa19.61■□□□□ 0.73
HMBOX1-212ENST00000558662 KIF1BO60333 1816 aa19.61■□□□□ 0.73
HMBOX1-212ENST00000558662 U2AF1L5P0DN76 240 aaPredicted RBP19.6■□□□□ 0.73
HMBOX1-212ENST00000558662 U2AF1Q01081 240 aaKnown RBP eCLIP19.6■□□□□ 0.73
HMBOX1-212ENST00000558662 ADCY5O95622 1261 aa19.6■□□□□ 0.73
HMBOX1-212ENST00000558662 PKP1Q13835 747 aa19.6■□□□□ 0.73
HMBOX1-212ENST00000558662 PLEKHF1Q96S99 279 aa19.6■□□□□ 0.73
HMBOX1-212ENST00000558662 MORC2Q9Y6X9 1032 aaPredicted RBP19.6■□□□□ 0.73
HMBOX1-212ENST00000558662 CD109Q6YHK3 1445 aa19.59■□□□□ 0.73
HMBOX1-212ENST00000558662 KDM4AO75164 1064 aa19.59■□□□□ 0.73
HMBOX1-212ENST00000558662 PLEKHM2Q8IWE5 1019 aa19.59■□□□□ 0.73
HMBOX1-212ENST00000558662 TSR2Q969E8 191 aaKnown RBP19.59■□□□□ 0.73
HMBOX1-212ENST00000558662 CALCOCO1Q9P1Z2 691 aa19.59■□□□□ 0.73
HMBOX1-212ENST00000558662 TRIM35Q9UPQ4 493 aa19.59■□□□□ 0.73
HMBOX1-212ENST00000558662 QRICH2Q9H0J4 1663 aa19.59■□□□□ 0.73
HMBOX1-212ENST00000558662 ZCCHC11Q5TAX3 1644 aaKnown RBP19.59■□□□□ 0.73
HMBOX1-212ENST00000558662 ASXL2Q76L83 1435 aa19.58■□□□□ 0.73
HMBOX1-212ENST00000558662 RIOK3O14730 519 aaKnown RBP19.58■□□□□ 0.73
HMBOX1-212ENST00000558662 DDX41Q9UJV9 622 aaKnown RBP19.58■□□□□ 0.73
HMBOX1-212ENST00000558662 GSPT1P15170 499 aaKnown RBP19.57■□□□□ 0.72
HMBOX1-212ENST00000558662 IL17RAQ96F46 866 aa19.57■□□□□ 0.72
HMBOX1-212ENST00000558662 SMTNL1A8MU46 457 aa19.57■□□□□ 0.72
HMBOX1-212ENST00000558662 ZGPATQ8N5A5 531 aaKnown RBP19.57■□□□□ 0.72
HMBOX1-212ENST00000558662 TIGD1Q96MW7 591 aa19.57■□□□□ 0.72
HMBOX1-212ENST00000558662 CTNNA3Q9UI47 895 aa19.57■□□□□ 0.72
HMBOX1-212ENST00000558662 PAXBP1Q9Y5B6 917 aa19.57■□□□□ 0.72
HMBOX1-212ENST00000558662 VWDEQ8N2E2 1590 aa19.56■□□□□ 0.72
HMBOX1-212ENST00000558662 ABCC4O15439 1325 aa19.56■□□□□ 0.72
HMBOX1-212ENST00000558662 EPB41L2O43491 1005 aaKnown RBP19.56■□□□□ 0.72
HMBOX1-212ENST00000558662 ANAPC15P60006 121 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms