RNA–Protein interactions for RNA: ENST00000558396.1

EXD1-203, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 4

Gene EXD1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-203ENST00000558396 KIF24Q5T7B8 1368 aa11.92□□□□□ -0.5
EXD1-203ENST00000558396 PIK3R4Q99570 1358 aa11.92□□□□□ -0.5
EXD1-203ENST00000558396 CFAP65Q6ZU64 1925 aaKnown RBP11.92□□□□□ -0.5
EXD1-203ENST00000558396 NUCB1Q02818 461 aa11.92□□□□□ -0.5
EXD1-203ENST00000558396 HSCBQ8IWL3 235 aa11.92□□□□□ -0.5
EXD1-203ENST00000558396 THEMISQ8N1K5 641 aaPredicted RBP11.92□□□□□ -0.5
EXD1-203ENST00000558396 FAM43AQ8N2R8 423 aa11.92□□□□□ -0.5
EXD1-203ENST00000558396 GCC1Q96CN9 775 aa11.92□□□□□ -0.5
EXD1-203ENST00000558396 CDK19Q9BWU1 502 aa11.92□□□□□ -0.5
EXD1-203ENST00000558396 STK26Q9P289 416 aa11.92□□□□□ -0.5
EXD1-203ENST00000558396 NPHP4O75161 1426 aaPredicted RBP11.92□□□□□ -0.5
EXD1-203ENST00000558396 MINK1Q8N4C8 1332 aaPredicted RBP11.91□□□□□ -0.5
EXD1-203ENST00000558396 HAP1P54257 671 aaPredicted RBP11.91□□□□□ -0.5
EXD1-203ENST00000558396 GNAI1P63096 354 aa11.91□□□□□ -0.5
EXD1-203ENST00000558396 NFE2L2Q16236 605 aa11.91□□□□□ -0.5
EXD1-203ENST00000558396 SNX21Q969T3 373 aa11.91□□□□□ -0.5
EXD1-203ENST00000558396 ISY1Q9ULR0 285 aaKnown RBP11.91□□□□□ -0.5
EXD1-203ENST00000558396 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
EXD1-203ENST00000558396 RBM25P49756 843 aaKnown RBP11.9□□□□□ -0.5
EXD1-203ENST00000558396 PTCH1Q13635 1447 aa11.9□□□□□ -0.5
EXD1-203ENST00000558396 EDC4Q6P2E9 1401 aaKnown RBP11.9□□□□□ -0.5
EXD1-203ENST00000558396 TMEM57Q8N5G2 664 aa11.9□□□□□ -0.5
EXD1-203ENST00000558396 SLKQ9H2G2 1235 aaPredicted RBP11.9□□□□□ -0.5
EXD1-203ENST00000558396 IFT57Q9NWB7 429 aa11.9□□□□□ -0.5
EXD1-203ENST00000558396 LRRC7Q96NW7 1537 aa11.9□□□□□ -0.5
EXD1-203ENST00000558396 AATKQ6ZMQ8 1374 aa11.9□□□□□ -0.5
EXD1-203ENST00000558396 DDX11L8A8MPP1 907 aa11.89□□□□□ -0.51
EXD1-203ENST00000558396 SAFB2Q14151 953 aaKnown RBP eCLIP11.89□□□□□ -0.51
EXD1-203ENST00000558396 NUTM2DQ5VT03 806 aaPredicted RBP11.89□□□□□ -0.51
EXD1-203ENST00000558396 SIRT1Q96EB6 747 aa11.89□□□□□ -0.51
EXD1-203ENST00000558396 RSPH6AQ9H0K4 717 aa11.89□□□□□ -0.51
EXD1-203ENST00000558396 BRPF3Q9ULD4 1205 aa11.89□□□□□ -0.51
EXD1-203ENST00000558396 CDK12Q9NYV4 1490 aaPredicted RBP11.89□□□□□ -0.51
EXD1-203ENST00000558396 MCM4P33991 863 aa11.88□□□□□ -0.51
EXD1-203ENST00000558396 MFAP1P55081 439 aaKnown RBP11.88□□□□□ -0.51
EXD1-203ENST00000558396 BMP2KLQ5H9B9 411 aa11.88□□□□□ -0.51
EXD1-203ENST00000558396 CHD1LQ86WJ1 897 aa11.88□□□□□ -0.51
EXD1-203ENST00000558396 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.88□□□□□ -0.51
EXD1-203ENST00000558396 API5Q9BZZ5 524 aaKnown RBP11.88□□□□□ -0.51
EXD1-203ENST00000558396 STAG3Q9UJ98 1225 aa11.88□□□□□ -0.51
EXD1-203ENST00000558396 CABP1Q9NZU7 370 aa11.87□□□□□ -0.51
EXD1-203ENST00000558396 NCOA3Q9Y6Q9 1424 aa11.86□□□□□ -0.51
EXD1-203ENST00000558396 MYO5BQ9ULV0 1848 aa11.86□□□□□ -0.51
EXD1-203ENST00000558396 PRKAR2BP31323 418 aa11.86□□□□□ -0.51
EXD1-203ENST00000558396 MRPL50Q8N5N7 158 aaKnown RBP11.86□□□□□ -0.51
EXD1-203ENST00000558396 POLKQ9UBT6 870 aa11.86□□□□□ -0.51
EXD1-203ENST00000558396 CPSF1Q10570 1443 aaKnown RBP11.86□□□□□ -0.51
EXD1-203ENST00000558396 GOLGA6L3A6NEY3 463 aa11.85□□□□□ -0.51
EXD1-203ENST00000558396 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
EXD1-203ENST00000558396 HDGFP51858 240 aaKnown RBP11.85□□□□□ -0.51
EXD1-203ENST00000558396 XIRP1Q702N8 1843 aaKnown RBP11.85□□□□□ -0.51
EXD1-203ENST00000558396 RIMS2Q9UQ26 1411 aa11.85□□□□□ -0.51
EXD1-203ENST00000558396 ABCC4O15439 1325 aa11.85□□□□□ -0.51
EXD1-203ENST00000558396 UBR1Q8IWV7 1749 aa11.84□□□□□ -0.51
EXD1-203ENST00000558396 VAMP4O75379 141 aa11.84□□□□□ -0.51
EXD1-203ENST00000558396 SKOR2Q2VWA4 1001 aaPredicted RBP11.84□□□□□ -0.51
EXD1-203ENST00000558396 ZBTB7BO15156 539 aaPredicted RBP11.83□□□□□ -0.52
EXD1-203ENST00000558396 IL13P35225 146 aa11.83□□□□□ -0.52
EXD1-203ENST00000558396 GBP4Q96PP9 640 aa11.83□□□□□ -0.52
EXD1-203ENST00000558396 FSD2A1L4K1 749 aa11.82□□□□□ -0.52
EXD1-203ENST00000558396 WASLO00401 505 aaPredicted RBP11.82□□□□□ -0.52
EXD1-203ENST00000558396 ZNF692Q9BU19 519 aaPredicted RBP11.82□□□□□ -0.52
EXD1-203ENST00000558396 RTN4Q9NQC3 1192 aaKnown RBP11.82□□□□□ -0.52
EXD1-203ENST00000558396 SETD1AO15047 1707 aaKnown RBP11.82□□□□□ -0.52
EXD1-203ENST00000558396 KNDC1Q76NI1 1749 aa11.82□□□□□ -0.52
EXD1-203ENST00000558396 TECPR2O15040 1411 aa11.81□□□□□ -0.52
EXD1-203ENST00000558396 TRAK2O60296 914 aa11.81□□□□□ -0.52
EXD1-203ENST00000558396 HSP90AB1P08238 724 aaKnown RBP11.81□□□□□ -0.52
EXD1-203ENST00000558396 DDIT3P35638 169 aa11.81□□□□□ -0.52
EXD1-203ENST00000558396 MRE11P49959 708 aa11.81□□□□□ -0.52
EXD1-203ENST00000558396 COG3Q96JB2 828 aa11.81□□□□□ -0.52
EXD1-203ENST00000558396 LNPKQ9C0E8 428 aa11.81□□□□□ -0.52
EXD1-203ENST00000558396 RGS17Q9UGC6 210 aaPredicted RBP11.81□□□□□ -0.52
EXD1-203ENST00000558396 CDC45O75419 566 aa11.8□□□□□ -0.52
EXD1-203ENST00000558396 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
EXD1-203ENST00000558396 ANKRD45Q5TZF3 282 aa11.8□□□□□ -0.52
EXD1-203ENST00000558396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.79□□□□□ -0.52
EXD1-203ENST00000558396 MON2Q7Z3U7 1717 aa11.79□□□□□ -0.52
EXD1-203ENST00000558396 NRKQ7Z2Y5 1582 aa11.79□□□□□ -0.52
EXD1-203ENST00000558396 MBIPQ9NS73 344 aa11.78□□□□□ -0.52
EXD1-203ENST00000558396 CCDC61Q9Y6R9 512 aa11.78□□□□□ -0.52
EXD1-203ENST00000558396 KIAA0232Q92628 1395 aa11.78□□□□□ -0.52
EXD1-203ENST00000558396 SLIT1O75093 1534 aa11.77□□□□□ -0.52
EXD1-203ENST00000558396 GOLGA6L22H0YM25 854 aa11.77□□□□□ -0.53
EXD1-203ENST00000558396 K7ELQ4 463 aaPredicted RBP11.77□□□□□ -0.53
EXD1-203ENST00000558396 LTKP29376 864 aa11.77□□□□□ -0.53
EXD1-203ENST00000558396 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.53
EXD1-203ENST00000558396 INTS3Q68E01 1043 aaKnown RBP11.77□□□□□ -0.53
EXD1-203ENST00000558396 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.53
EXD1-203ENST00000558396 RPAP2Q8IXW5 612 aaPredicted RBP11.77□□□□□ -0.53
EXD1-203ENST00000558396 ARHGAP23Q9P227 1491 aa11.76□□□□□ -0.53
EXD1-203ENST00000558396 RABEP1Q15276 862 aa11.76□□□□□ -0.53
EXD1-203ENST00000558396 CASC1Q6TDU7 716 aa11.76□□□□□ -0.53
EXD1-203ENST00000558396 NUDT16Q96DE0 195 aaKnown RBP11.76□□□□□ -0.53
EXD1-203ENST00000558396 PHACTR3Q96KR7 559 aa11.76□□□□□ -0.53
EXD1-203ENST00000558396 PTPRCP08575 1304 aa11.76□□□□□ -0.53
EXD1-203ENST00000558396 ITSN1Q15811 1721 aa11.75□□□□□ -0.53
EXD1-203ENST00000558396 AKAP12Q02952 1782 aa11.75□□□□□ -0.53
EXD1-203ENST00000558396 MAP2P11137 1827 aaKnown RBP11.75□□□□□ -0.53
EXD1-203ENST00000558396 HSP90AA1P07900 732 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms