RNA–Protein interactions for RNA: ENST00000558220.1

SHC4-205, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-205ENST00000558220 DSG2Q14126 1118 aa12.42□□□□□ -0.42
SHC4-205ENST00000558220 HRO43593 1189 aa12.41□□□□□ -0.42
SHC4-205ENST00000558220 LAMC1P11047 1609 aa12.4□□□□□ -0.42
SHC4-205ENST00000558220 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.42
SHC4-205ENST00000558220 CDK12Q9NYV4 1490 aaPredicted RBP12.4□□□□□ -0.42
SHC4-205ENST00000558220 AFF2P51816 1311 aa12.39□□□□□ -0.43
SHC4-205ENST00000558220 CCDC144AA2RUR9 1427 aa12.39□□□□□ -0.43
SHC4-205ENST00000558220 PPP4R3BQ5MIZ7 849 aa12.39□□□□□ -0.43
SHC4-205ENST00000558220 PNPLA6Q8IY17 1366 aa12.39□□□□□ -0.43
SHC4-205ENST00000558220 ROBO2Q9HCK4 1378 aa12.39□□□□□ -0.43
SHC4-205ENST00000558220 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
SHC4-205ENST00000558220 TBC1D12O60347 775 aa12.37□□□□□ -0.43
SHC4-205ENST00000558220 RBM6P78332 1123 aaKnown RBP12.37□□□□□ -0.43
SHC4-205ENST00000558220 C8orf37Q96NL8 207 aa12.37□□□□□ -0.43
SHC4-205ENST00000558220 ANKRD30BQ9BXX2 1392 aa12.37□□□□□ -0.43
SHC4-205ENST00000558220 LRPPRCP42704 1394 aaKnown RBP12.36□□□□□ -0.43
SHC4-205ENST00000558220 DDX17Q92841 729 aaKnown RBP12.36□□□□□ -0.43
SHC4-205ENST00000558220 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
SHC4-205ENST00000558220 NGLY1Q96IV0 654 aa12.36□□□□□ -0.43
SHC4-205ENST00000558220 ORAI2Q96SN7 254 aa12.36□□□□□ -0.43
SHC4-205ENST00000558220 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
SHC4-205ENST00000558220 QTRT2Q9H974 415 aaKnown RBP12.36□□□□□ -0.43
SHC4-205ENST00000558220 NPHP3Q7Z494 1330 aa12.36□□□□□ -0.43
SHC4-205ENST00000558220 CDC42BPGQ6DT37 1551 aa12.35□□□□□ -0.43
SHC4-205ENST00000558220 IFT172Q9UG01 1749 aa12.35□□□□□ -0.43
SHC4-205ENST00000558220 RGL3Q3MIN7 710 aa12.34□□□□□ -0.43
SHC4-205ENST00000558220 ESCO1Q5FWF5 840 aa12.34□□□□□ -0.43
SHC4-205ENST00000558220 KNDC1Q76NI1 1749 aa12.34□□□□□ -0.43
SHC4-205ENST00000558220 ADAMTS2O95450 1211 aa12.33□□□□□ -0.44
SHC4-205ENST00000558220 TECPR2O15040 1411 aa12.33□□□□□ -0.44
SHC4-205ENST00000558220 SPATA31E1Q6ZUB1 1445 aa12.33□□□□□ -0.44
SHC4-205ENST00000558220 ADGRF5Q8IZF2 1346 aa12.33□□□□□ -0.44
SHC4-205ENST00000558220 COL22A1Q8NFW1 1626 aaPredicted RBP12.33□□□□□ -0.44
SHC4-205ENST00000558220 ABCC11Q96J66 1382 aa12.32□□□□□ -0.44
SHC4-205ENST00000558220 KCNK17Q96T54 332 aa12.32□□□□□ -0.44
SHC4-205ENST00000558220 TRPC5Q9UL62 973 aaPredicted RBP12.32□□□□□ -0.44
SHC4-205ENST00000558220 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
SHC4-205ENST00000558220 SIRT1Q96EB6 747 aa12.31□□□□□ -0.44
SHC4-205ENST00000558220 USP21Q9UK80 565 aa12.31□□□□□ -0.44
SHC4-205ENST00000558220 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
SHC4-205ENST00000558220 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
SHC4-205ENST00000558220 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
SHC4-205ENST00000558220 STK26Q9P289 416 aa12.3□□□□□ -0.44
SHC4-205ENST00000558220 PIK3C2GO75747 1445 aa12.29□□□□□ -0.44
SHC4-205ENST00000558220 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
SHC4-205ENST00000558220 KIF1AQ12756 1690 aa12.29□□□□□ -0.44
SHC4-205ENST00000558220 RGS12O14924 1447 aa12.28□□□□□ -0.44
SHC4-205ENST00000558220 FOXO3O43524 673 aa12.28□□□□□ -0.44
SHC4-205ENST00000558220 WAPLQ7Z5K2 1190 aa12.28□□□□□ -0.44
SHC4-205ENST00000558220 DHX57Q6P158 1386 aaKnown RBP12.28□□□□□ -0.44
SHC4-205ENST00000558220 FMN2Q9NZ56 1722 aa12.28□□□□□ -0.44
SHC4-205ENST00000558220 YTHDC2Q9H6S0 1430 aaKnown RBP12.28□□□□□ -0.44
SHC4-205ENST00000558220 PXDNQ92626 1479 aa12.27□□□□□ -0.44
SHC4-205ENST00000558220 TMEM132EQ6IEE7 984 aa12.27□□□□□ -0.45
SHC4-205ENST00000558220 STAC3Q96MF2 364 aa12.27□□□□□ -0.45
SHC4-205ENST00000558220 C14orf93Q9H972 538 aaKnown RBP12.27□□□□□ -0.45
SHC4-205ENST00000558220 ATAD2Q6PL18 1390 aa12.27□□□□□ -0.45
SHC4-205ENST00000558220 MYOM2P54296 1465 aa12.27□□□□□ -0.45
SHC4-205ENST00000558220 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
SHC4-205ENST00000558220 NUTM2FA1L443 756 aa12.25□□□□□ -0.45
SHC4-205ENST00000558220 PSME1Q06323 249 aa12.25□□□□□ -0.45
SHC4-205ENST00000558220 ZNF454Q8N9F8 522 aa12.25□□□□□ -0.45
SHC4-205ENST00000558220 CRISPLD2Q9H0B8 497 aa12.25□□□□□ -0.45
SHC4-205ENST00000558220 ATRNO75882 1429 aa12.25□□□□□ -0.45
SHC4-205ENST00000558220 RGPD8O14715 1765 aaPredicted RBP12.24□□□□□ -0.45
SHC4-205ENST00000558220 NRXN1Q9ULB1 1477 aa12.24□□□□□ -0.45
SHC4-205ENST00000558220 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.23□□□□□ -0.45
SHC4-205ENST00000558220 PLEKHH1Q9ULM0 1364 aa12.23□□□□□ -0.45
SHC4-205ENST00000558220 SPATA31A3Q5VYP0 1347 aa12.23□□□□□ -0.45
SHC4-205ENST00000558220 KRT28Q7Z3Y7 464 aa12.23□□□□□ -0.45
SHC4-205ENST00000558220 CCDC125Q86Z20 511 aa12.23□□□□□ -0.45
SHC4-205ENST00000558220 XPCQ01831 940 aaPredicted RBP12.22□□□□□ -0.45
SHC4-205ENST00000558220 PPP1R15BQ5SWA1 713 aa12.22□□□□□ -0.45
SHC4-205ENST00000558220 CFAP70Q5T0N1 1121 aa12.22□□□□□ -0.45
SHC4-205ENST00000558220 GJD4Q96KN9 370 aaPredicted RBP12.22□□□□□ -0.45
SHC4-205ENST00000558220 DLC1Q96QB1 1528 aa12.21□□□□□ -0.45
SHC4-205ENST00000558220 BCL9LQ86UU0 1499 aa12.21□□□□□ -0.45
SHC4-205ENST00000558220 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.45
SHC4-205ENST00000558220 UNC5CLQ8IV45 518 aa12.21□□□□□ -0.45
SHC4-205ENST00000558220 BCL2L12Q9HB09 334 aa12.21□□□□□ -0.45
SHC4-205ENST00000558220 POGKQ9P215 609 aa12.21□□□□□ -0.45
SHC4-205ENST00000558220 EIF3AQ14152 1382 aaKnown RBP12.19□□□□□ -0.46
SHC4-205ENST00000558220 RAB3GAP2Q9H2M9 1393 aa12.19□□□□□ -0.46
SHC4-205ENST00000558220 PRAM1Q96QH2 718 aa12.19□□□□□ -0.46
SHC4-205ENST00000558220 SLC4A5Q9BY07 1137 aa12.19□□□□□ -0.46
SHC4-205ENST00000558220 RYDENQ9NUL5 291 aaKnown RBP12.19□□□□□ -0.46
SHC4-205ENST00000558220 TNS3Q68CZ2 1445 aa12.19□□□□□ -0.46
SHC4-205ENST00000558220 ANKARQ7Z5J8 1434 aa12.19□□□□□ -0.46
SHC4-205ENST00000558220 USP32Q8NFA0 1604 aa12.19□□□□□ -0.46
SHC4-205ENST00000558220 SBNO1A3KN83 1393 aa12.18□□□□□ -0.46
SHC4-205ENST00000558220 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
SHC4-205ENST00000558220 SLIT2O94813 1529 aa12.18□□□□□ -0.46
SHC4-205ENST00000558220 HRCP23327 699 aa12.18□□□□□ -0.46
SHC4-205ENST00000558220 FOSBP53539 338 aa12.18□□□□□ -0.46
SHC4-205ENST00000558220 PTPN5P54829 565 aa12.18□□□□□ -0.46
SHC4-205ENST00000558220 EP400Q96L91 3159 aa12.18□□□□□ -0.46
SHC4-205ENST00000558220 NWD2Q9ULI1 1742 aa12.17□□□□□ -0.46
SHC4-205ENST00000558220 ADGRB2O60241 1585 aa12.17□□□□□ -0.46
SHC4-205ENST00000558220 SAFB2Q14151 953 aaKnown RBP eCLIP12.16□□□□□ -0.46
SHC4-205ENST00000558220 BHMG1C9JSJ3 638 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms