RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 DDX27Q96GQ7 796 aaKnown RBP16.86■□□□□ 0.29
HMGB1P8-201ENST00000558211 UBAP1LF5GYI3 381 aa16.83■□□□□ 0.28
HMGB1P8-201ENST00000558211 PPP1R15BQ5SWA1 713 aa16.83■□□□□ 0.28
HMGB1P8-201ENST00000558211 WASLO00401 505 aaPredicted RBP16.82■□□□□ 0.28
HMGB1P8-201ENST00000558211 CDK19Q9BWU1 502 aa16.82■□□□□ 0.28
HMGB1P8-201ENST00000558211 TOM1O60784 492 aa16.81■□□□□ 0.28
HMGB1P8-201ENST00000558211 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
HMGB1P8-201ENST00000558211 PIP4K2BP78356 416 aa16.8■□□□□ 0.28
HMGB1P8-201ENST00000558211 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
HMGB1P8-201ENST00000558211 EVC2Q86UK5 1308 aa16.79■□□□□ 0.28
HMGB1P8-201ENST00000558211 PLPP6Q8IY26 295 aa16.79■□□□□ 0.28
HMGB1P8-201ENST00000558211 TESK2Q96S53 571 aa16.79■□□□□ 0.28
HMGB1P8-201ENST00000558211 SLAIN2Q9P270 581 aa16.79■□□□□ 0.28
HMGB1P8-201ENST00000558211 CDC42BPGQ6DT37 1551 aa16.78■□□□□ 0.28
HMGB1P8-201ENST00000558211 DCCP43146 1447 aa16.78■□□□□ 0.28
HMGB1P8-201ENST00000558211 ADGRB2O60241 1585 aa16.77■□□□□ 0.28
HMGB1P8-201ENST00000558211 RGPD8O14715 1765 aaPredicted RBP16.77■□□□□ 0.28
HMGB1P8-201ENST00000558211 FMN2Q9NZ56 1722 aa16.77■□□□□ 0.28
HMGB1P8-201ENST00000558211 TMF1P82094 1093 aa16.77■□□□□ 0.28
HMGB1P8-201ENST00000558211 POLR3GLQ9BT43 218 aa16.77■□□□□ 0.28
HMGB1P8-201ENST00000558211 TULP4Q9NRJ4 1543 aa16.76■□□□□ 0.27
HMGB1P8-201ENST00000558211 SBNO2Q9Y2G9 1366 aa16.76■□□□□ 0.27
HMGB1P8-201ENST00000558211 CAMK2BQ13554 666 aa16.75■□□□□ 0.27
HMGB1P8-201ENST00000558211 ESCO1Q5FWF5 840 aa16.75■□□□□ 0.27
HMGB1P8-201ENST00000558211 NUDT16Q96DE0 195 aaKnown RBP16.75■□□□□ 0.27
HMGB1P8-201ENST00000558211 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
HMGB1P8-201ENST00000558211 WDR70Q9NW82 654 aa16.75■□□□□ 0.27
HMGB1P8-201ENST00000558211 MST1RQ04912 1400 aa16.75■□□□□ 0.27
HMGB1P8-201ENST00000558211 C1orf167Q5SNV9 1468 aa16.74■□□□□ 0.27
HMGB1P8-201ENST00000558211 DISP3Q9P2K9 1392 aa16.74■□□□□ 0.27
HMGB1P8-201ENST00000558211 PRR36Q9H6K5 1346 aa16.73■□□□□ 0.27
HMGB1P8-201ENST00000558211 HOXB3P14651 431 aaPredicted RBP16.72■□□□□ 0.27
HMGB1P8-201ENST00000558211 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
HMGB1P8-201ENST00000558211 USP32Q8NFA0 1604 aa16.71■□□□□ 0.27
HMGB1P8-201ENST00000558211 TMC1Q8TDI8 760 aa16.71■□□□□ 0.27
HMGB1P8-201ENST00000558211 C11orf95C9JLR9 678 aaPredicted RBP16.7■□□□□ 0.26
HMGB1P8-201ENST00000558211 BRINP3Q76B58 766 aa16.7■□□□□ 0.26
HMGB1P8-201ENST00000558211 ANKARQ7Z5J8 1434 aa16.7■□□□□ 0.26
HMGB1P8-201ENST00000558211 ATP7BP35670 1465 aa16.69■□□□□ 0.26
HMGB1P8-201ENST00000558211 SLC34A2O95436 690 aa16.69■□□□□ 0.26
HMGB1P8-201ENST00000558211 CDCA8Q53HL2 280 aa16.69■□□□□ 0.26
HMGB1P8-201ENST00000558211 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
HMGB1P8-201ENST00000558211 ROBO1Q9Y6N7 1651 aa16.69■□□□□ 0.26
HMGB1P8-201ENST00000558211 E2F4Q16254 413 aa16.68■□□□□ 0.26
HMGB1P8-201ENST00000558211 CABP1Q9NZU7 370 aa16.68■□□□□ 0.26
HMGB1P8-201ENST00000558211 ATAD2Q6PL18 1390 aa16.67■□□□□ 0.26
HMGB1P8-201ENST00000558211 FOXO3O43524 673 aa16.67■□□□□ 0.26
HMGB1P8-201ENST00000558211 NGDNQ8NEJ9 315 aaKnown RBP16.67■□□□□ 0.26
HMGB1P8-201ENST00000558211 PPIP5K1Q6PFW1 1433 aa16.67■□□□□ 0.26
HMGB1P8-201ENST00000558211 ITSN1Q15811 1721 aa16.67■□□□□ 0.26
HMGB1P8-201ENST00000558211 XPCQ01831 940 aaPredicted RBP16.66■□□□□ 0.26
HMGB1P8-201ENST00000558211 SLC12A5Q9H2X9 1139 aa16.66■□□□□ 0.26
HMGB1P8-201ENST00000558211 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
HMGB1P8-201ENST00000558211 FBXO41Q8TF61 875 aa16.65■□□□□ 0.26
HMGB1P8-201ENST00000558211 PUS7Q96PZ0 661 aaKnown RBP16.65■□□□□ 0.26
HMGB1P8-201ENST00000558211 SNPHO15079 494 aa16.64■□□□□ 0.25
HMGB1P8-201ENST00000558211 PSME1Q06323 249 aa16.64■□□□□ 0.25
HMGB1P8-201ENST00000558211 TOPAZ1Q8N9V7 1692 aa16.64■□□□□ 0.25
HMGB1P8-201ENST00000558211 ACEP12821 1306 aa16.64■□□□□ 0.25
HMGB1P8-201ENST00000558211 KIF7Q2M1P5 1343 aa16.64■□□□□ 0.25
HMGB1P8-201ENST00000558211 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
HMGB1P8-201ENST00000558211 DOK7Q18PE1 504 aa16.63■□□□□ 0.25
HMGB1P8-201ENST00000558211 PTCD2Q8WV60 388 aaKnown RBP16.63■□□□□ 0.25
HMGB1P8-201ENST00000558211 KIF1AQ12756 1690 aa16.62■□□□□ 0.25
HMGB1P8-201ENST00000558211 KCNV2Q8TDN2 545 aa16.62■□□□□ 0.25
HMGB1P8-201ENST00000558211 OXER1Q8TDS5 423 aa16.62■□□□□ 0.25
HMGB1P8-201ENST00000558211 KRT28Q7Z3Y7 464 aa16.61■□□□□ 0.25
HMGB1P8-201ENST00000558211 ARIH1Q9Y4X5 557 aaPredicted RBP16.61■□□□□ 0.25
HMGB1P8-201ENST00000558211 NPHP3Q7Z494 1330 aa16.61■□□□□ 0.25
HMGB1P8-201ENST00000558211 WASHC2AQ641Q2 1341 aa16.6■□□□□ 0.25
HMGB1P8-201ENST00000558211 CCDC7Q96M83 1385 aa16.6■□□□□ 0.25
HMGB1P8-201ENST00000558211 PHLPP1O60346 1717 aa16.59■□□□□ 0.25
HMGB1P8-201ENST00000558211 HSPA1LP34931 641 aa16.59■□□□□ 0.25
HMGB1P8-201ENST00000558211 HDGFL2Q7Z4V5 671 aaPredicted RBP16.59■□□□□ 0.25
HMGB1P8-201ENST00000558211 LMOD2Q6P5Q4 547 aa16.58■□□□□ 0.24
HMGB1P8-201ENST00000558211 TERF2IPQ9NYB0 399 aa16.58■□□□□ 0.24
HMGB1P8-201ENST00000558211 NHSL1Q5SYE7 1610 aa16.58■□□□□ 0.24
HMGB1P8-201ENST00000558211 POLR3AO14802 1390 aaPredicted RBP16.57■□□□□ 0.24
HMGB1P8-201ENST00000558211 MYOM1P52179 1685 aa16.56■□□□□ 0.24
HMGB1P8-201ENST00000558211 KTN1Q86UP2 1357 aaKnown RBP16.56■□□□□ 0.24
HMGB1P8-201ENST00000558211 NINLQ9Y2I6 1382 aa16.56■□□□□ 0.24
HMGB1P8-201ENST00000558211 ZNF316A6NFI3 1004 aaPredicted RBP16.56■□□□□ 0.24
HMGB1P8-201ENST00000558211 ZSWIM6Q9HCJ5 1215 aa16.56■□□□□ 0.24
HMGB1P8-201ENST00000558211 AHDC1Q5TGY3 1603 aaPredicted RBP16.56■□□□□ 0.24
HMGB1P8-201ENST00000558211 SOS2Q07890 1332 aaPredicted RBP16.55■□□□□ 0.24
HMGB1P8-201ENST00000558211 AKAP12Q02952 1782 aa16.55■□□□□ 0.24
HMGB1P8-201ENST00000558211 A0A1W2PP64 1363 aa16.54■□□□□ 0.24
HMGB1P8-201ENST00000558211 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
HMGB1P8-201ENST00000558211 PANK3Q9H999 370 aa16.54■□□□□ 0.24
HMGB1P8-201ENST00000558211 PCDHGA4Q9Y5G9 962 aa16.54■□□□□ 0.24
HMGB1P8-201ENST00000558211 PXDNQ92626 1479 aa16.54■□□□□ 0.24
HMGB1P8-201ENST00000558211 CD163L1Q9NR16 1453 aa16.54■□□□□ 0.24
HMGB1P8-201ENST00000558211 ANKRD36BQ8N2N9 1353 aa16.53■□□□□ 0.24
HMGB1P8-201ENST00000558211 GPR153Q6NV75 609 aa16.53■□□□□ 0.24
HMGB1P8-201ENST00000558211 UPF1Q92900 1129 aaKnown RBP eCLIP16.53■□□□□ 0.24
HMGB1P8-201ENST00000558211 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
HMGB1P8-201ENST00000558211 USP6P35125 1406 aa16.53■□□□□ 0.24
HMGB1P8-201ENST00000558211 CPSF1Q10570 1443 aaKnown RBP16.53■□□□□ 0.24
HMGB1P8-201ENST00000558211 RIMBP2O15034 1052 aa16.52■□□□□ 0.24
HMGB1P8-201ENST00000558211 NUTM2GQ5VZR2 741 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms