RNA–Protein interactions for RNA: ENST00000558176.1

HMG20A-203, Transcript of high mobility group 20A, humanhuman

TSL 3

Gene HMG20A, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-203ENST00000558176 CDC42BPAQ5VT25 1732 aa5.17□□□□□ -1.58
HMG20A-203ENST00000558176 CEP170BQ9Y4F5 1589 aaPredicted RBP5.17□□□□□ -1.58
HMG20A-203ENST00000558176 PTPRKQ15262 1439 aa5.17□□□□□ -1.58
HMG20A-203ENST00000558176 SLC10A3P09131 477 aa5.17□□□□□ -1.58
HMG20A-203ENST00000558176 CRIPAKQ8N1N5 446 aa5.17□□□□□ -1.58
HMG20A-203ENST00000558176 PKD2L1Q9P0L9 805 aa5.17□□□□□ -1.58
HMG20A-203ENST00000558176 PLA2R1Q13018 1463 aa5.17□□□□□ -1.58
HMG20A-203ENST00000558176 TCOF1Q13428 1488 aaKnown RBP5.17□□□□□ -1.58
HMG20A-203ENST00000558176 PLEKHH2Q8IVE3 1493 aa5.17□□□□□ -1.58
HMG20A-203ENST00000558176 MROH2AA6NES4 1674 aa5.17□□□□□ -1.58
HMG20A-203ENST00000558176 CLTCQ00610 1675 aaKnown RBP5.17□□□□□ -1.58
HMG20A-203ENST00000558176 SUPT6HQ7KZ85 1726 aaKnown RBP5.17□□□□□ -1.58
HMG20A-203ENST00000558176 MTUS2Q5JR59 1369 aa5.16□□□□□ -1.58
HMG20A-203ENST00000558176 ZNF142P52746 1687 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-203ENST00000558176 MLLT3P42568 568 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-203ENST00000558176 FOXC1Q12948 553 aa5.16□□□□□ -1.58
HMG20A-203ENST00000558176 SCUBE3Q8IX30 993 aa5.16□□□□□ -1.58
HMG20A-203ENST00000558176 ZNF644Q9H582 1327 aaPredicted RBP5.16□□□□□ -1.58
HMG20A-203ENST00000558176 KIAA1107Q9UPP5 1409 aa5.15□□□□□ -1.58
HMG20A-203ENST00000558176 A2ML1A8K2U0 1454 aa5.15□□□□□ -1.58
HMG20A-203ENST00000558176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.15□□□□□ -1.59
HMG20A-203ENST00000558176 FAM181BA6NEQ2 426 aa5.15□□□□□ -1.59
HMG20A-203ENST00000558176 AVPP01185 164 aa5.15□□□□□ -1.59
HMG20A-203ENST00000558176 PIP4K2BP78356 416 aa5.15□□□□□ -1.59
HMG20A-203ENST00000558176 KDM2AQ9Y2K7 1162 aa5.15□□□□□ -1.59
HMG20A-203ENST00000558176 TIAM1Q13009 1591 aa5.15□□□□□ -1.59
HMG20A-203ENST00000558176 RPIAP49247 311 aa5.14□□□□□ -1.59
HMG20A-203ENST00000558176 FAM161AQ3B820 660 aa5.14□□□□□ -1.59
HMG20A-203ENST00000558176 LCE2CQ5TA81 110 aa5.14□□□□□ -1.59
HMG20A-203ENST00000558176 ARHGEF1Q92888 912 aaKnown RBP5.14□□□□□ -1.59
HMG20A-203ENST00000558176 SPSB2Q99619 263 aa5.14□□□□□ -1.59
HMG20A-203ENST00000558176 TOR4AQ9NXH8 423 aa5.14□□□□□ -1.59
HMG20A-203ENST00000558176 DACH1Q9UI36 760 aa5.14□□□□□ -1.59
HMG20A-203ENST00000558176 TNRQ92752 1358 aa5.14□□□□□ -1.59
HMG20A-203ENST00000558176 MBD5Q9P267 1494 aa5.13□□□□□ -1.59
HMG20A-203ENST00000558176 EHBP1L1Q8N3D4 1523 aa5.13□□□□□ -1.59
HMG20A-203ENST00000558176 KDM5DQ9BY66 1539 aa5.13□□□□□ -1.59
HMG20A-203ENST00000558176 MED1Q15648 1581 aaPredicted RBP5.13□□□□□ -1.59
HMG20A-203ENST00000558176 DNMT1P26358 1616 aaKnown RBP5.13□□□□□ -1.59
HMG20A-203ENST00000558176 KIF3BO15066 747 aa5.13□□□□□ -1.59
HMG20A-203ENST00000558176 HSPA1LP34931 641 aa5.13□□□□□ -1.59
HMG20A-203ENST00000558176 CTC1Q2NKJ3 1217 aa5.13□□□□□ -1.59
HMG20A-203ENST00000558176 RSPH4AQ5TD94 716 aa5.13□□□□□ -1.59
HMG20A-203ENST00000558176 FBXO31Q5XUX0 539 aaPredicted RBP5.13□□□□□ -1.59
HMG20A-203ENST00000558176 DHX29Q7Z478 1369 aaKnown RBP5.13□□□□□ -1.59
HMG20A-203ENST00000558176 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMG20A-203ENST00000558176 PZPP20742 1482 aa5.13□□□□□ -1.59
HMG20A-203ENST00000558176 CAMSAP2Q08AD1 1489 aa5.13□□□□□ -1.59
HMG20A-203ENST00000558176 CCDC141Q6ZP82 1450 aa5.13□□□□□ -1.59
HMG20A-203ENST00000558176 NEURL4Q96JN8 1562 aa5.12□□□□□ -1.59
HMG20A-203ENST00000558176 ADGBQ8N7X0 1667 aa5.12□□□□□ -1.59
HMG20A-203ENST00000558176 NUTM2FA1L443 756 aa5.12□□□□□ -1.59
HMG20A-203ENST00000558176 C11orf95C9JLR9 678 aaPredicted RBP5.12□□□□□ -1.59
HMG20A-203ENST00000558176 AXIN1O15169 862 aa5.12□□□□□ -1.59
HMG20A-203ENST00000558176 CD2BP2O95400 341 aaKnown RBP5.12□□□□□ -1.59
HMG20A-203ENST00000558176 PUS10Q3MIT2 529 aaKnown RBP5.12□□□□□ -1.59
HMG20A-203ENST00000558176 CYP4X1Q8N118 509 aa5.12□□□□□ -1.59
HMG20A-203ENST00000558176 PXYLP1Q8TE99 480 aa5.12□□□□□ -1.59
HMG20A-203ENST00000558176 GMPR2Q9P2T1 348 aaKnown RBP5.12□□□□□ -1.59
HMG20A-203ENST00000558176 RTEL1-TNFRSF6BF6WH68 1400 aa5.12□□□□□ -1.59
HMG20A-203ENST00000558176 CEP162Q5TB80 1403 aa5.12□□□□□ -1.59
HMG20A-203ENST00000558176 SHANK2Q9UPX8 1470 aa5.12□□□□□ -1.59
HMG20A-203ENST00000558176 CPS1P31327 1500 aa5.12□□□□□ -1.59
HMG20A-203ENST00000558176 TOM1O60784 492 aa5.11□□□□□ -1.59
HMG20A-203ENST00000558176 FCHSD2O94868 740 aa5.11□□□□□ -1.59
HMG20A-203ENST00000558176 OATP04181 439 aa5.11□□□□□ -1.59
HMG20A-203ENST00000558176 SMCPP49901 116 aaPredicted RBP5.11□□□□□ -1.59
HMG20A-203ENST00000558176 FCF1Q9Y324 198 aaKnown RBP5.11□□□□□ -1.59
HMG20A-203ENST00000558176 WASHC2CQ9Y4E1 1318 aa5.11□□□□□ -1.59
HMG20A-203ENST00000558176 UGGT1Q9NYU2 1555 aa5.11□□□□□ -1.59
HMG20A-203ENST00000558176 NPHP4O75161 1426 aaPredicted RBP5.1□□□□□ -1.59
HMG20A-203ENST00000558176 NCOA2Q15596 1464 aa5.1□□□□□ -1.59
HMG20A-203ENST00000558176 ANKLE2Q86XL3 938 aa5.1□□□□□ -1.59
HMG20A-203ENST00000558176 VWDEQ8N2E2 1590 aa5.1□□□□□ -1.59
HMG20A-203ENST00000558176 KCNV2Q8TDN2 545 aa5.1□□□□□ -1.59
HMG20A-203ENST00000558176 MIA2Q96PC5 1412 aa5.1□□□□□ -1.59
HMG20A-203ENST00000558176 NLRP1Q9C000 1473 aa5.1□□□□□ -1.59
HMG20A-203ENST00000558176 FAM135AQ9P2D6 1515 aa5.1□□□□□ -1.59
HMG20A-203ENST00000558176 SETD1BQ9UPS6 1966 aaKnown RBP5.09□□□□□ -1.59
HMG20A-203ENST00000558176 POLR1AO95602 1720 aaPredicted RBP5.09□□□□□ -1.59
HMG20A-203ENST00000558176 MORN1Q5T089 497 aa5.09□□□□□ -1.59
HMG20A-203ENST00000558176 THEMISQ8N1K5 641 aaPredicted RBP5.09□□□□□ -1.59
HMG20A-203ENST00000558176 THAP11Q96EK4 314 aa5.09□□□□□ -1.59
HMG20A-203ENST00000558176 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.59
HMG20A-203ENST00000558176 ALKQ9UM73 1620 aa5.08□□□□□ -1.6
HMG20A-203ENST00000558176 ABCC3O15438 1527 aa5.08□□□□□ -1.6
HMG20A-203ENST00000558176 METTL3Q86U44 580 aaKnown RBP5.08□□□□□ -1.6
HMG20A-203ENST00000558176 FAM160A2Q8N612 972 aaPredicted RBP5.08□□□□□ -1.6
HMG20A-203ENST00000558176 RNF17Q9BXT8 1623 aaKnown RBP5.08□□□□□ -1.6
HMG20A-203ENST00000558176 LRRC7Q96NW7 1537 aa5.07□□□□□ -1.6
HMG20A-203ENST00000558176 MED14O60244 1454 aa5.07□□□□□ -1.6
HMG20A-203ENST00000558176 ERVK-7P63135 1459 aa5.07□□□□□ -1.6
HMG20A-203ENST00000558176 TTC24A2A3L6 582 aaPredicted RBP5.07□□□□□ -1.6
HMG20A-203ENST00000558176 FMNL1O95466 1100 aaPredicted RBP5.07□□□□□ -1.6
HMG20A-203ENST00000558176 TSPY4P0CV99 314 aa5.07□□□□□ -1.6
HMG20A-203ENST00000558176 TSPY10P0CW01 314 aa5.07□□□□□ -1.6
HMG20A-203ENST00000558176 XP32Q5T750 250 aa5.07□□□□□ -1.6
HMG20A-203ENST00000558176 IQGAP1P46940 1657 aa5.07□□□□□ -1.6
HMG20A-203ENST00000558176 DEPDC5O75140 1603 aa5.07□□□□□ -1.6
HMG20A-203ENST00000558176 SYNMO15061 1565 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms