RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 MEX3CQ5U5Q3 659 aaKnown RBP11.08□□□□□ -0.64
SPG11-205ENST00000558080 WAPLQ7Z5K2 1190 aa11.08□□□□□ -0.64
SPG11-205ENST00000558080 NUTM2AQ8IVF1 878 aaPredicted RBP11.08□□□□□ -0.64
SPG11-205ENST00000558080 ORAI2Q96SN7 254 aa11.08□□□□□ -0.64
SPG11-205ENST00000558080 LAMC1P11047 1609 aa11.08□□□□□ -0.64
SPG11-205ENST00000558080 PIK3C2GO75747 1445 aa11.08□□□□□ -0.64
SPG11-205ENST00000558080 PRAG1Q86YV5 1406 aa11.08□□□□□ -0.64
SPG11-205ENST00000558080 SPATA31A6Q5VVP1 1343 aa11.08□□□□□ -0.64
SPG11-205ENST00000558080 LRPPRCP42704 1394 aaKnown RBP11.07□□□□□ -0.64
SPG11-205ENST00000558080 ARHGAP33O14559 1287 aa11.07□□□□□ -0.64
SPG11-205ENST00000558080 PLPP6Q8IY26 295 aa11.07□□□□□ -0.64
SPG11-205ENST00000558080 CFAP70Q5T0N1 1121 aa11.06□□□□□ -0.64
SPG11-205ENST00000558080 LRRC59Q96AG4 307 aaKnown RBP11.06□□□□□ -0.64
SPG11-205ENST00000558080 YTHDC2Q9H6S0 1430 aaKnown RBP11.06□□□□□ -0.64
SPG11-205ENST00000558080 CDC42BPGQ6DT37 1551 aa11.06□□□□□ -0.64
SPG11-205ENST00000558080 FMN2Q9NZ56 1722 aa11.06□□□□□ -0.64
SPG11-205ENST00000558080 PLEKHH1Q9ULM0 1364 aa11.05□□□□□ -0.64
SPG11-205ENST00000558080 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
SPG11-205ENST00000558080 HRCP23327 699 aa11.05□□□□□ -0.64
SPG11-205ENST00000558080 C14orf93Q9H972 538 aaKnown RBP11.05□□□□□ -0.64
SPG11-205ENST00000558080 KDM2AQ9Y2K7 1162 aa11.05□□□□□ -0.64
SPG11-205ENST00000558080 MYOM2P54296 1465 aa11.05□□□□□ -0.64
SPG11-205ENST00000558080 NRXN1Q9ULB1 1477 aa11.05□□□□□ -0.64
SPG11-205ENST00000558080 ABCC11Q96J66 1382 aa11.04□□□□□ -0.64
SPG11-205ENST00000558080 TECPR2O15040 1411 aa11.04□□□□□ -0.64
SPG11-205ENST00000558080 DSG2Q14126 1118 aa11.04□□□□□ -0.64
SPG11-205ENST00000558080 ESCO1Q5FWF5 840 aa11.04□□□□□ -0.64
SPG11-205ENST00000558080 ADGRD1Q6QNK2 874 aa11.04□□□□□ -0.64
SPG11-205ENST00000558080 DHX57Q6P158 1386 aaKnown RBP11.03□□□□□ -0.64
SPG11-205ENST00000558080 DCAF11Q8TEB1 546 aa11.03□□□□□ -0.64
SPG11-205ENST00000558080 PNPLA6Q8IY17 1366 aa11.03□□□□□ -0.64
SPG11-205ENST00000558080 MARF1Q9Y4F3 1742 aaKnown RBP11.02□□□□□ -0.65
SPG11-205ENST00000558080 TK2O00142 265 aa11.01□□□□□ -0.65
SPG11-205ENST00000558080 SAFB2Q14151 953 aaKnown RBP eCLIP11.01□□□□□ -0.65
SPG11-205ENST00000558080 SOS2Q07890 1332 aaPredicted RBP11.01□□□□□ -0.65
SPG11-205ENST00000558080 FOXO3O43524 673 aa11□□□□□ -0.65
SPG11-205ENST00000558080 TBC1D12O60347 775 aa11□□□□□ -0.65
SPG11-205ENST00000558080 XPCQ01831 940 aaPredicted RBP11□□□□□ -0.65
SPG11-205ENST00000558080 ZNF772Q68DY9 489 aaPredicted RBP11□□□□□ -0.65
SPG11-205ENST00000558080 SIRT1Q96EB6 747 aa11□□□□□ -0.65
SPG11-205ENST00000558080 KIF1AQ12756 1690 aa11□□□□□ -0.65
SPG11-205ENST00000558080 COL22A1Q8NFW1 1626 aaPredicted RBP10.99□□□□□ -0.65
SPG11-205ENST00000558080 ADAMTS2O95450 1211 aa10.99□□□□□ -0.65
SPG11-205ENST00000558080 PPP4R3BQ5MIZ7 849 aa10.99□□□□□ -0.65
SPG11-205ENST00000558080 PRAM1Q96QH2 718 aa10.99□□□□□ -0.65
SPG11-205ENST00000558080 POGKQ9P215 609 aa10.99□□□□□ -0.65
SPG11-205ENST00000558080 AFF2P51816 1311 aa10.99□□□□□ -0.65
SPG11-205ENST00000558080 ADGRB1O14514 1584 aa10.99□□□□□ -0.65
SPG11-205ENST00000558080 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
SPG11-205ENST00000558080 C8orf37Q96NL8 207 aa10.98□□□□□ -0.65
SPG11-205ENST00000558080 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
SPG11-205ENST00000558080 TRAK1Q9UPV9 953 aa10.98□□□□□ -0.65
SPG11-205ENST00000558080 NPHP3Q7Z494 1330 aa10.98□□□□□ -0.65
SPG11-205ENST00000558080 PXDNQ92626 1479 aa10.98□□□□□ -0.65
SPG11-205ENST00000558080 DLC1Q96QB1 1528 aa10.98□□□□□ -0.65
SPG11-205ENST00000558080 ARHGEF28Q8N1W1 1705 aaKnown RBP10.98□□□□□ -0.65
SPG11-205ENST00000558080 HRO43593 1189 aa10.97□□□□□ -0.65
SPG11-205ENST00000558080 DMRTA1Q5VZB9 504 aa10.97□□□□□ -0.65
SPG11-205ENST00000558080 RYDENQ9NUL5 291 aaKnown RBP10.97□□□□□ -0.65
SPG11-205ENST00000558080 USP32Q8NFA0 1604 aa10.97□□□□□ -0.65
SPG11-205ENST00000558080 RXRBP28702 533 aa10.96□□□□□ -0.65
SPG11-205ENST00000558080 PSEN2P49810 448 aa10.96□□□□□ -0.65
SPG11-205ENST00000558080 NGLY1Q96IV0 654 aa10.96□□□□□ -0.65
SPG11-205ENST00000558080 KIAA1210Q9ULL0 1709 aa10.95□□□□□ -0.66
SPG11-205ENST00000558080 MINK1Q8N4C8 1332 aaPredicted RBP10.95□□□□□ -0.66
SPG11-205ENST00000558080 OXER1Q8TDS5 423 aa10.95□□□□□ -0.66
SPG11-205ENST00000558080 STAC3Q96MF2 364 aa10.95□□□□□ -0.66
SPG11-205ENST00000558080 HIRIP3Q9BW71 556 aaPredicted RBP10.95□□□□□ -0.66
SPG11-205ENST00000558080 ADGRB2O60241 1585 aa10.94□□□□□ -0.66
SPG11-205ENST00000558080 KRT28Q7Z3Y7 464 aa10.94□□□□□ -0.66
SPG11-205ENST00000558080 CRISPLD2Q9H0B8 497 aa10.94□□□□□ -0.66
SPG11-205ENST00000558080 QTRT2Q9H974 415 aaKnown RBP10.94□□□□□ -0.66
SPG11-205ENST00000558080 ITSN1Q15811 1721 aa10.92□□□□□ -0.66
SPG11-205ENST00000558080 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
SPG11-205ENST00000558080 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
SPG11-205ENST00000558080 SPATA31A3Q5VYP0 1347 aa10.91□□□□□ -0.66
SPG11-205ENST00000558080 PSME1Q06323 249 aa10.91□□□□□ -0.66
SPG11-205ENST00000558080 TRIM26Q12899 539 aaPredicted RBP10.91□□□□□ -0.66
SPG11-205ENST00000558080 LMOD2Q6P5Q4 547 aa10.91□□□□□ -0.66
SPG11-205ENST00000558080 PLA2G2EQ9NZK7 142 aa10.91□□□□□ -0.66
SPG11-205ENST00000558080 USP21Q9UK80 565 aa10.91□□□□□ -0.66
SPG11-205ENST00000558080 TRPM3Q9HCF6 1732 aaPredicted RBP10.91□□□□□ -0.66
SPG11-205ENST00000558080 ANKARQ7Z5J8 1434 aa10.91□□□□□ -0.66
SPG11-205ENST00000558080 RBM6P78332 1123 aaKnown RBP10.9□□□□□ -0.66
SPG11-205ENST00000558080 TULP4Q9NRJ4 1543 aa10.89□□□□□ -0.67
SPG11-205ENST00000558080 CDK12Q9NYV4 1490 aaPredicted RBP10.89□□□□□ -0.67
SPG11-205ENST00000558080 WASLO00401 505 aaPredicted RBP10.89□□□□□ -0.67
SPG11-205ENST00000558080 NBPF1Q3BBV0 1214 aa10.89□□□□□ -0.67
SPG11-205ENST00000558080 CABLES1Q8TDN4 633 aa10.89□□□□□ -0.67
SPG11-205ENST00000558080 SIN3AQ96ST3 1273 aa10.89□□□□□ -0.67
SPG11-205ENST00000558080 KCNK17Q96T54 332 aa10.89□□□□□ -0.67
SPG11-205ENST00000558080 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.89□□□□□ -0.67
SPG11-205ENST00000558080 ALS2Q96Q42 1657 aa10.89□□□□□ -0.67
SPG11-205ENST00000558080 PRR36Q9H6K5 1346 aa10.88□□□□□ -0.67
SPG11-205ENST00000558080 RGS12O14924 1447 aa10.88□□□□□ -0.67
SPG11-205ENST00000558080 HAP1P54257 671 aaPredicted RBP10.88□□□□□ -0.67
SPG11-205ENST00000558080 NEUROD1Q13562 356 aa10.88□□□□□ -0.67
SPG11-205ENST00000558080 PPP1R15BQ5SWA1 713 aa10.88□□□□□ -0.67
SPG11-205ENST00000558080 TNS3Q68CZ2 1445 aa10.88□□□□□ -0.67
SPG11-205ENST00000558080 FNBP4Q8N3X1 1017 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms