RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 PHACTR3Q96KR7 559 aa26.83■■□□□ 1.88
SNRPA1-205ENST00000558036 TMPOP42166 694 aaKnown RBP26.82■■□□□ 1.88
SNRPA1-205ENST00000558036 NFAT5O94916 1531 aa26.82■■□□□ 1.88
SNRPA1-205ENST00000558036 NEFLP07196 543 aa26.81■■□□□ 1.88
SNRPA1-205ENST00000558036 GCP02774 474 aa26.81■■□□□ 1.88
SNRPA1-205ENST00000558036 DUSP27Q5VZP5 1158 aa26.81■■□□□ 1.88
SNRPA1-205ENST00000558036 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
SNRPA1-205ENST00000558036 PNNQ9H307 717 aaKnown RBP26.81■■□□□ 1.88
SNRPA1-205ENST00000558036 SLFN5Q08AF3 891 aa26.8■■□□□ 1.88
SNRPA1-205ENST00000558036 SULT6B1Q6IMI4 303 aa26.8■■□□□ 1.88
SNRPA1-205ENST00000558036 KCNH5Q8NCM2 988 aa26.8■■□□□ 1.88
SNRPA1-205ENST00000558036 PXDNQ92626 1479 aa26.78■■□□□ 1.88
SNRPA1-205ENST00000558036 LTV1Q96GA3 475 aaPredicted RBP26.78■■□□□ 1.88
SNRPA1-205ENST00000558036 USP19O94966 1318 aa26.77■■□□□ 1.88
SNRPA1-205ENST00000558036 RIPK4P57078 832 aa26.77■■□□□ 1.88
SNRPA1-205ENST00000558036 CCDC27Q2M243 656 aa26.77■■□□□ 1.88
SNRPA1-205ENST00000558036 ALS2Q96Q42 1657 aa26.76■■□□□ 1.87
SNRPA1-205ENST00000558036 NEFMP07197 916 aa26.76■■□□□ 1.87
SNRPA1-205ENST00000558036 TRIM35Q9UPQ4 493 aa26.76■■□□□ 1.87
SNRPA1-205ENST00000558036 SLIT3O75094 1523 aa26.75■■□□□ 1.87
SNRPA1-205ENST00000558036 KIF24Q5T7B8 1368 aa26.75■■□□□ 1.87
SNRPA1-205ENST00000558036 RCAN3Q9UKA8 241 aa26.75■■□□□ 1.87
SNRPA1-205ENST00000558036 LTN1O94822 1766 aa26.74■■□□□ 1.87
SNRPA1-205ENST00000558036 E9PSI1 815 aa26.74■■□□□ 1.87
SNRPA1-205ENST00000558036 TRMT2AQ8IZ69 625 aaKnown RBP26.74■■□□□ 1.87
SNRPA1-205ENST00000558036 CABLES1Q8TDN4 633 aa26.74■■□□□ 1.87
SNRPA1-205ENST00000558036 TNS3Q68CZ2 1445 aa26.74■■□□□ 1.87
SNRPA1-205ENST00000558036 EYA1Q99502 592 aa26.74■■□□□ 1.87
SNRPA1-205ENST00000558036 SPATA31A3Q5VYP0 1347 aa26.73■■□□□ 1.87
SNRPA1-205ENST00000558036 IP6K1Q92551 441 aa26.73■■□□□ 1.87
SNRPA1-205ENST00000558036 RGPD1P0DJD0 1748 aa26.72■■□□□ 1.87
SNRPA1-205ENST00000558036 MED1Q15648 1581 aaPredicted RBP26.72■■□□□ 1.87
SNRPA1-205ENST00000558036 ARHGEF25Q86VW2 580 aa26.72■■□□□ 1.87
SNRPA1-205ENST00000558036 RTL1A6NKG5 1358 aa26.72■■□□□ 1.87
SNRPA1-205ENST00000558036 WDR63Q8IWG1 891 aa26.71■■□□□ 1.87
SNRPA1-205ENST00000558036 LTBP4Q8N2S1 1624 aa26.71■■□□□ 1.87
SNRPA1-205ENST00000558036 ZC3H6P61129 1189 aaKnown RBP26.71■■□□□ 1.87
SNRPA1-205ENST00000558036 NFE2L2Q16236 605 aa26.71■■□□□ 1.87
SNRPA1-205ENST00000558036 NCBP3Q53F19 620 aaKnown RBP26.7■■□□□ 1.86
SNRPA1-205ENST00000558036 ARHGEF10O15013 1369 aa26.7■■□□□ 1.86
SNRPA1-205ENST00000558036 IGSF1Q8N6C5 1336 aa26.69■■□□□ 1.86
SNRPA1-205ENST00000558036 SOS2Q07890 1332 aaPredicted RBP26.68■■□□□ 1.86
SNRPA1-205ENST00000558036 USHBP1Q8N6Y0 703 aa26.66■■□□□ 1.86
SNRPA1-205ENST00000558036 RNF123Q5XPI4 1314 aa26.66■■□□□ 1.86
SNRPA1-205ENST00000558036 AXIN2Q9Y2T1 843 aa26.66■■□□□ 1.86
SNRPA1-205ENST00000558036 THUMPD2Q9BTF0 503 aaKnown RBP26.65■■□□□ 1.86
SNRPA1-205ENST00000558036 KDRP35968 1356 aa26.64■■□□□ 1.86
SNRPA1-205ENST00000558036 TSR2Q969E8 191 aaKnown RBP26.62■■□□□ 1.85
SNRPA1-205ENST00000558036 LRRC59Q96AG4 307 aaKnown RBP26.62■■□□□ 1.85
SNRPA1-205ENST00000558036 PHRF1Q9P1Y6 1649 aaKnown RBP26.62■■□□□ 1.85
SNRPA1-205ENST00000558036 FAM83GA6ND36 823 aa26.62■■□□□ 1.85
SNRPA1-205ENST00000558036 NBPF6Q5VWK0 638 aa26.62■■□□□ 1.85
SNRPA1-205ENST00000558036 NBPF4Q96M43 638 aa26.62■■□□□ 1.85
SNRPA1-205ENST00000558036 RRP1P56182 461 aaKnown RBP26.6■■□□□ 1.85
SNRPA1-205ENST00000558036 DCTN1Q14203 1278 aa26.59■■□□□ 1.85
SNRPA1-205ENST00000558036 CHRNA2Q15822 529 aa26.59■■□□□ 1.85
SNRPA1-205ENST00000558036 ANKRD24Q8TF21 1146 aa26.59■■□□□ 1.85
SNRPA1-205ENST00000558036 MYH16Q9H6N6 1097 aa26.59■■□□□ 1.85
SNRPA1-205ENST00000558036 PLIN1O60240 522 aa26.58■■□□□ 1.85
SNRPA1-205ENST00000558036 MTHFSDQ2M296 383 aaKnown RBP26.57■■□□□ 1.84
SNRPA1-205ENST00000558036 FANCIQ9NVI1 1328 aa26.57■■□□□ 1.84
SNRPA1-205ENST00000558036 NHSL1Q5SYE7 1610 aa26.56■■□□□ 1.84
SNRPA1-205ENST00000558036 KIAA0232Q92628 1395 aa26.56■■□□□ 1.84
SNRPA1-205ENST00000558036 LAS1LQ9Y4W2 734 aaKnown RBP26.56■■□□□ 1.84
SNRPA1-205ENST00000558036 CRYBG1Q9Y4K1 1723 aa26.55■■□□□ 1.84
SNRPA1-205ENST00000558036 IL16Q14005 1332 aa26.55■■□□□ 1.84
SNRPA1-205ENST00000558036 ROBO1Q9Y6N7 1651 aa26.54■■□□□ 1.84
SNRPA1-205ENST00000558036 DLG5Q8TDM6 1919 aa26.54■■□□□ 1.84
SNRPA1-205ENST00000558036 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
SNRPA1-205ENST00000558036 LMOD3Q0VAK6 560 aa26.53■■□□□ 1.84
SNRPA1-205ENST00000558036 MCM10Q7L590 875 aa26.53■■□□□ 1.84
SNRPA1-205ENST00000558036 ERBB3P21860 1342 aa26.52■■□□□ 1.84
SNRPA1-205ENST00000558036 RGPD2P0DJD1 1756 aa26.51■■□□□ 1.84
SNRPA1-205ENST00000558036 BCAR3O75815 825 aa26.51■■□□□ 1.84
SNRPA1-205ENST00000558036 HAP1P54257 671 aaPredicted RBP26.51■■□□□ 1.84
SNRPA1-205ENST00000558036 RGPD5Q99666 1765 aa26.5■■□□□ 1.83
SNRPA1-205ENST00000558036 EXOSC9Q06265 439 aaKnown RBP26.5■■□□□ 1.83
SNRPA1-205ENST00000558036 CPDO75976 1380 aa26.48■■□□□ 1.83
SNRPA1-205ENST00000558036 CALD1Q05682 793 aaKnown RBP26.47■■□□□ 1.83
SNRPA1-205ENST00000558036 GAS2L2Q8NHY3 880 aa26.47■■□□□ 1.83
SNRPA1-205ENST00000558036 PRDM11Q9NQV5 511 aa26.47■■□□□ 1.83
SNRPA1-205ENST00000558036 PIP4K2BP78356 416 aa26.47■■□□□ 1.83
SNRPA1-205ENST00000558036 COL18A1P39060 1754 aa26.46■■□□□ 1.83
SNRPA1-205ENST00000558036 C20orf194Q5TEA3 1177 aa26.45■■□□□ 1.82
SNRPA1-205ENST00000558036 BCL2L13Q9BXK5 485 aa26.45■■□□□ 1.82
SNRPA1-205ENST00000558036 IFT57Q9NWB7 429 aa26.45■■□□□ 1.82
SNRPA1-205ENST00000558036 NLRP2Q9NX02 1062 aa26.45■■□□□ 1.82
SNRPA1-205ENST00000558036 CSB-PGBD3P0DP91 1061 aa26.44■■□□□ 1.82
SNRPA1-205ENST00000558036 MBIPQ9NS73 344 aa26.44■■□□□ 1.82
SNRPA1-205ENST00000558036 ZNF853P0CG23 659 aa26.44■■□□□ 1.82
SNRPA1-205ENST00000558036 RARSP54136 660 aaKnown RBP26.44■■□□□ 1.82
SNRPA1-205ENST00000558036 GNAI1P63096 354 aa26.44■■□□□ 1.82
SNRPA1-205ENST00000558036 RTF1Q92541 710 aaKnown RBP26.43■■□□□ 1.82
SNRPA1-205ENST00000558036 CFAP44Q96MT7 982 aa26.43■■□□□ 1.82
SNRPA1-205ENST00000558036 NCAPD2Q15021 1401 aa26.42■■□□□ 1.82
SNRPA1-205ENST00000558036 ERICH6BQ5W0A0 696 aa26.42■■□□□ 1.82
SNRPA1-205ENST00000558036 AHDC1Q5TGY3 1603 aaPredicted RBP26.41■■□□□ 1.82
SNRPA1-205ENST00000558036 ABCA3Q99758 1704 aa26.41■■□□□ 1.82
SNRPA1-205ENST00000558036 GNAT3A8MTJ3 354 aa26.41■■□□□ 1.82
SNRPA1-205ENST00000558036 TOM1O60784 492 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms