RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 KRT28Q7Z3Y7 464 aa16.47■□□□□ 0.23
SEMA6D-208ENST00000558014 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.47■□□□□ 0.23
SEMA6D-208ENST00000558014 ECM2O94769 699 aaPredicted RBP16.46■□□□□ 0.23
SEMA6D-208ENST00000558014 ZNF622Q969S3 477 aaKnown RBP eCLIP16.46■□□□□ 0.23
SEMA6D-208ENST00000558014 IPO9Q96P70 1041 aaKnown RBP16.46■□□□□ 0.23
SEMA6D-208ENST00000558014 ARHGEF11O15085 1522 aa16.46■□□□□ 0.23
SEMA6D-208ENST00000558014 TMOD2Q9NZR1 351 aa16.46■□□□□ 0.23
SEMA6D-208ENST00000558014 ZBED9Q6R2W3 1325 aa16.46■□□□□ 0.22
SEMA6D-208ENST00000558014 KCNH5Q8NCM2 988 aa16.46■□□□□ 0.22
SEMA6D-208ENST00000558014 CCDC61Q9Y6R9 512 aa16.46■□□□□ 0.22
SEMA6D-208ENST00000558014 IDH1O75874 414 aaKnown RBP16.45■□□□□ 0.22
SEMA6D-208ENST00000558014 GPTP24298 496 aa16.45■□□□□ 0.22
SEMA6D-208ENST00000558014 NME9Q86XW9 330 aa16.45■□□□□ 0.22
SEMA6D-208ENST00000558014 HOOK1Q9UJC3 728 aaKnown RBP16.45■□□□□ 0.22
SEMA6D-208ENST00000558014 AK7Q96M32 723 aa16.45■□□□□ 0.22
SEMA6D-208ENST00000558014 IPO7O95373 1038 aaKnown RBP16.45■□□□□ 0.22
SEMA6D-208ENST00000558014 USP5P45974 858 aa16.45■□□□□ 0.22
SEMA6D-208ENST00000558014 GOLGA6L1Q8N7Z2 621 aa16.45■□□□□ 0.22
SEMA6D-208ENST00000558014 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
SEMA6D-208ENST00000558014 BICRAQ9NZM4 1560 aa16.45■□□□□ 0.22
SEMA6D-208ENST00000558014 BCAR3O75815 825 aa16.44■□□□□ 0.22
SEMA6D-208ENST00000558014 CDK13Q14004 1512 aaKnown RBP16.44■□□□□ 0.22
SEMA6D-208ENST00000558014 AACSQ86V21 672 aa16.44■□□□□ 0.22
SEMA6D-208ENST00000558014 RPGRQ92834 1020 aaKnown RBP16.44■□□□□ 0.22
SEMA6D-208ENST00000558014 GNAT3A8MTJ3 354 aa16.43■□□□□ 0.22
SEMA6D-208ENST00000558014 TDO2P48775 406 aa16.43■□□□□ 0.22
SEMA6D-208ENST00000558014 ZNF652Q9Y2D9 606 aa16.43■□□□□ 0.22
SEMA6D-208ENST00000558014 TROQ12816 1431 aaPredicted RBP16.43■□□□□ 0.22
SEMA6D-208ENST00000558014 PLEKHH2Q8IVE3 1493 aa16.42■□□□□ 0.22
SEMA6D-208ENST00000558014 NACAP1Q9BZK3 213 aa16.42■□□□□ 0.22
SEMA6D-208ENST00000558014 IL1RAPL2Q9NP60 686 aa16.42■□□□□ 0.22
SEMA6D-208ENST00000558014 TOM1O60784 492 aa16.42■□□□□ 0.22
SEMA6D-208ENST00000558014 METTL24Q5JXM2 366 aa16.42■□□□□ 0.22
SEMA6D-208ENST00000558014 SRGAP3O43295 1099 aa16.42■□□□□ 0.22
SEMA6D-208ENST00000558014 CEP126Q9P2H0 1117 aa16.42■□□□□ 0.22
SEMA6D-208ENST00000558014 MYD88Q99836 296 aa16.42■□□□□ 0.22
SEMA6D-208ENST00000558014 CCDC73Q6ZRK6 1079 aa16.41■□□□□ 0.22
SEMA6D-208ENST00000558014 C6orf229H3BNL8 230 aa16.41■□□□□ 0.22
SEMA6D-208ENST00000558014 OFD1O75665 1012 aa16.41■□□□□ 0.22
SEMA6D-208ENST00000558014 SLC4A8Q2Y0W8 1093 aa16.41■□□□□ 0.22
SEMA6D-208ENST00000558014 CRACR2BQ8N4Y2 399 aaPredicted RBP16.41■□□□□ 0.22
SEMA6D-208ENST00000558014 PSMA5P28066 241 aa16.41■□□□□ 0.22
SEMA6D-208ENST00000558014 NBPF8Q3BBV2 869 aa16.4■□□□□ 0.22
SEMA6D-208ENST00000558014 ERC1Q8IUD2 1116 aa16.4■□□□□ 0.22
SEMA6D-208ENST00000558014 CCDC69A6NI79 296 aa16.4■□□□□ 0.22
SEMA6D-208ENST00000558014 DDX11L8A8MPP1 907 aa16.4■□□□□ 0.22
SEMA6D-208ENST00000558014 CDC45O75419 566 aa16.4■□□□□ 0.22
SEMA6D-208ENST00000558014 TTLL5Q6EMB2 1281 aa16.4■□□□□ 0.22
SEMA6D-208ENST00000558014 TRMT112Q9UI30 125 aaKnown RBP16.4■□□□□ 0.22
SEMA6D-208ENST00000558014 LAMC3Q9Y6N6 1575 aa16.39■□□□□ 0.22
SEMA6D-208ENST00000558014 ADGRL1O94910 1474 aa16.39■□□□□ 0.21
SEMA6D-208ENST00000558014 EHBP1L1Q8N3D4 1523 aa16.39■□□□□ 0.21
SEMA6D-208ENST00000558014 ZBTB3Q9H5J0 574 aa16.39■□□□□ 0.21
SEMA6D-208ENST00000558014 PATL2C9JE40 543 aaKnown RBP16.39■□□□□ 0.21
SEMA6D-208ENST00000558014 MATR3P43243 847 aaKnown RBP eCLIP16.38■□□□□ 0.21
SEMA6D-208ENST00000558014 SASS6Q6UVJ0 657 aa16.38■□□□□ 0.21
SEMA6D-208ENST00000558014 IDI1Q13907 227 aa16.38■□□□□ 0.21
SEMA6D-208ENST00000558014 ZNF76P36508 570 aa16.38■□□□□ 0.21
SEMA6D-208ENST00000558014 PDILTQ8N807 584 aa16.38■□□□□ 0.21
SEMA6D-208ENST00000558014 BRPF1P55201 1214 aaPredicted RBP16.38■□□□□ 0.21
SEMA6D-208ENST00000558014 SOGA3Q5TF21 947 aa16.38■□□□□ 0.21
SEMA6D-208ENST00000558014 CLEC11AQ9Y240 323 aa16.38■□□□□ 0.21
SEMA6D-208ENST00000558014 SSBP05455 408 aaKnown RBP eCLIP16.38■□□□□ 0.21
SEMA6D-208ENST00000558014 RFC4P35249 363 aa16.37■□□□□ 0.21
SEMA6D-208ENST00000558014 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
SEMA6D-208ENST00000558014 KIAA0586Q9BVV6 1533 aa16.37■□□□□ 0.21
SEMA6D-208ENST00000558014 EMILIN1Q9Y6C2 1016 aa16.37■□□□□ 0.21
SEMA6D-208ENST00000558014 POLR3DP05423 398 aaPredicted RBP16.37■□□□□ 0.21
SEMA6D-208ENST00000558014 CABLES1Q8TDN4 633 aa16.37■□□□□ 0.21
SEMA6D-208ENST00000558014 SDF4Q9BRK5 362 aa16.37■□□□□ 0.21
SEMA6D-208ENST00000558014 EPRSP07814 1512 aaKnown RBP16.37■□□□□ 0.21
SEMA6D-208ENST00000558014 PLB1Q6P1J6 1458 aa16.37■□□□□ 0.21
SEMA6D-208ENST00000558014 C22orf23Q9BZE7 217 aa16.36■□□□□ 0.21
SEMA6D-208ENST00000558014 FMNL2Q96PY5 1086 aa16.36■□□□□ 0.21
SEMA6D-208ENST00000558014 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
SEMA6D-208ENST00000558014 MINDY4BA8MYZ0 360 aa16.36■□□□□ 0.21
SEMA6D-208ENST00000558014 CCT4P50991 539 aaKnown RBP16.36■□□□□ 0.21
SEMA6D-208ENST00000558014 NEK4P51957 841 aa16.36■□□□□ 0.21
SEMA6D-208ENST00000558014 HOMER1Q86YM7 354 aa16.36■□□□□ 0.21
SEMA6D-208ENST00000558014 RPGRIP1LQ68CZ1 1315 aa16.36■□□□□ 0.21
SEMA6D-208ENST00000558014 TRMT1LQ7Z2T5 733 aaKnown RBP16.35■□□□□ 0.21
SEMA6D-208ENST00000558014 WDHD1O75717 1129 aaPredicted RBP16.35■□□□□ 0.21
SEMA6D-208ENST00000558014 NUTM1Q86Y26 1132 aa16.35■□□□□ 0.21
SEMA6D-208ENST00000558014 HFM1A2PYH4 1435 aa16.35■□□□□ 0.21
SEMA6D-208ENST00000558014 KIAA1107Q9UPP5 1409 aa16.35■□□□□ 0.21
SEMA6D-208ENST00000558014 CAVIN4Q5BKX8 364 aa16.35■□□□□ 0.21
SEMA6D-208ENST00000558014 JARID2Q92833 1246 aaPredicted RBP16.35■□□□□ 0.21
SEMA6D-208ENST00000558014 NSD3Q9BZ95 1437 aa16.35■□□□□ 0.21
SEMA6D-208ENST00000558014 HECW1Q76N89 1606 aa16.34■□□□□ 0.21
SEMA6D-208ENST00000558014 HSP90AB2PQ58FF8 381 aa16.34■□□□□ 0.21
SEMA6D-208ENST00000558014 SCLT1Q96NL6 688 aa16.34■□□□□ 0.21
SEMA6D-208ENST00000558014 ATAD2Q6PL18 1390 aa16.34■□□□□ 0.21
SEMA6D-208ENST00000558014 DZIP1Q86YF9 867 aaKnown RBP16.34■□□□□ 0.21
SEMA6D-208ENST00000558014 CWC27Q6UX04 472 aaKnown RBP16.33■□□□□ 0.21
SEMA6D-208ENST00000558014 AIDAQ96BJ3 306 aa16.33■□□□□ 0.21
SEMA6D-208ENST00000558014 UBAC1Q9BSL1 405 aa16.33■□□□□ 0.21
SEMA6D-208ENST00000558014 OLFM4Q6UX06 510 aa16.33■□□□□ 0.2
SEMA6D-208ENST00000558014 DUSP27Q5VZP5 1158 aa16.33■□□□□ 0.2
SEMA6D-208ENST00000558014 FBLN1P23142 703 aa16.33■□□□□ 0.2
SEMA6D-208ENST00000558014 MSH6P52701 1360 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms