RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 VGFO15240 615 aaPredicted RBP8.93□□□□□ -0.98
TRPM1-204ENST00000557948 POLD1P28340 1107 aa8.93□□□□□ -0.98
TRPM1-204ENST00000557948 WAPLQ7Z5K2 1190 aa8.93□□□□□ -0.98
TRPM1-204ENST00000557948 NLGN2Q8NFZ4 835 aa8.93□□□□□ -0.98
TRPM1-204ENST00000557948 NRXN1Q9ULB1 1477 aa8.93□□□□□ -0.98
TRPM1-204ENST00000557948 PEAK1Q9H792 1746 aa8.93□□□□□ -0.98
TRPM1-204ENST00000557948 IFT172Q9UG01 1749 aa8.93□□□□□ -0.98
TRPM1-204ENST00000557948 KIF1BO60333 1816 aa8.93□□□□□ -0.98
TRPM1-204ENST00000557948 TOPAZ1Q8N9V7 1692 aa8.92□□□□□ -0.98
TRPM1-204ENST00000557948 ALS2Q96Q42 1657 aa8.92□□□□□ -0.98
TRPM1-204ENST00000557948 DHX57Q6P158 1386 aaKnown RBP8.92□□□□□ -0.98
TRPM1-204ENST00000557948 TXNRD1Q16881 649 aa8.92□□□□□ -0.98
TRPM1-204ENST00000557948 TCP11L2Q8N4U5 519 aa8.92□□□□□ -0.98
TRPM1-204ENST00000557948 CLEC11AQ9Y240 323 aa8.92□□□□□ -0.98
TRPM1-204ENST00000557948 TRPM3Q9HCF6 1732 aaPredicted RBP8.91□□□□□ -0.98
TRPM1-204ENST00000557948 CRYBG1Q9Y4K1 1723 aa8.91□□□□□ -0.98
TRPM1-204ENST00000557948 TOMM70O94826 608 aa8.91□□□□□ -0.98
TRPM1-204ENST00000557948 CHRNA2Q15822 529 aa8.91□□□□□ -0.98
TRPM1-204ENST00000557948 PAXIP1Q6ZW49 1069 aaPredicted RBP8.91□□□□□ -0.98
TRPM1-204ENST00000557948 SPDYE1Q8NFV5 336 aaPredicted RBP8.91□□□□□ -0.98
TRPM1-204ENST00000557948 AKT1S1Q96B36 256 aa8.91□□□□□ -0.98
TRPM1-204ENST00000557948 KIAA0232Q92628 1395 aa8.9□□□□□ -0.98
TRPM1-204ENST00000557948 PTF1AQ7RTS3 328 aa8.9□□□□□ -0.98
TRPM1-204ENST00000557948 CFAP44Q96MT7 982 aa8.9□□□□□ -0.98
TRPM1-204ENST00000557948 RBM42Q9BTD8 480 aaKnown RBP8.9□□□□□ -0.98
TRPM1-204ENST00000557948 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.9□□□□□ -0.98
TRPM1-204ENST00000557948 STK26Q9P289 416 aa8.9□□□□□ -0.98
TRPM1-204ENST00000557948 CLTCL1P53675 1640 aa8.9□□□□□ -0.99
TRPM1-204ENST00000557948 SSH2Q76I76 1423 aa8.89□□□□□ -0.99
TRPM1-204ENST00000557948 HTRA3P83110 453 aa8.89□□□□□ -0.99
TRPM1-204ENST00000557948 FAM161AQ3B820 660 aa8.89□□□□□ -0.99
TRPM1-204ENST00000557948 KANK4Q5T7N3 995 aaPredicted RBP8.89□□□□□ -0.99
TRPM1-204ENST00000557948 PMFBP1Q8TBY8 1022 aa8.89□□□□□ -0.99
TRPM1-204ENST00000557948 THRAP3Q9Y2W1 955 aaKnown RBP8.89□□□□□ -0.99
TRPM1-204ENST00000557948 TNS2Q63HR2 1409 aa8.88□□□□□ -0.99
TRPM1-204ENST00000557948 ARHGEF28Q8N1W1 1705 aaKnown RBP8.88□□□□□ -0.99
TRPM1-204ENST00000557948 NUBP1P53384 320 aa8.88□□□□□ -0.99
TRPM1-204ENST00000557948 LARP1Q6PKG0 1096 aaKnown RBP8.88□□□□□ -0.99
TRPM1-204ENST00000557948 ATP7BP35670 1465 aa8.88□□□□□ -0.99
TRPM1-204ENST00000557948 GPRASP1Q5JY77 1395 aa8.87□□□□□ -0.99
TRPM1-204ENST00000557948 PLEKHH1Q9ULM0 1364 aa8.87□□□□□ -0.99
TRPM1-204ENST00000557948 AKAP12Q02952 1782 aa8.87□□□□□ -0.99
TRPM1-204ENST00000557948 HSPA1AP0DMV8 641 aaKnown RBP8.87□□□□□ -0.99
TRPM1-204ENST00000557948 HSPA1BP0DMV9 641 aaKnown RBP8.87□□□□□ -0.99
TRPM1-204ENST00000557948 REM2Q8IYK8 340 aaPredicted RBP8.87□□□□□ -0.99
TRPM1-204ENST00000557948 SLC16A10Q8TF71 515 aa8.87□□□□□ -0.99
TRPM1-204ENST00000557948 CREBZFQ9NS37 354 aa8.87□□□□□ -0.99
TRPM1-204ENST00000557948 COL24A1Q17RW2 1714 aa8.87□□□□□ -0.99
TRPM1-204ENST00000557948 NUP155O75694 1391 aa8.86□□□□□ -0.99
TRPM1-204ENST00000557948 KNDC1Q76NI1 1749 aa8.86□□□□□ -0.99
TRPM1-204ENST00000557948 PAK3O75914 559 aaPredicted RBP8.86□□□□□ -0.99
TRPM1-204ENST00000557948 PRR29P0C7W0 189 aa8.86□□□□□ -0.99
TRPM1-204ENST00000557948 DDB1Q16531 1140 aa8.86□□□□□ -0.99
TRPM1-204ENST00000557948 LRRC37A3O60309 1634 aa8.86□□□□□ -0.99
TRPM1-204ENST00000557948 PHRF1Q9P1Y6 1649 aaKnown RBP8.85□□□□□ -0.99
TRPM1-204ENST00000557948 ZC3H6P61129 1189 aaKnown RBP8.85□□□□□ -0.99
TRPM1-204ENST00000557948 RNF25Q96BH1 459 aaPredicted RBP8.85□□□□□ -0.99
TRPM1-204ENST00000557948 TULP4Q9NRJ4 1543 aa8.85□□□□□ -0.99
TRPM1-204ENST00000557948 PAPPAQ13219 1627 aa8.84□□□□□ -0.99
TRPM1-204ENST00000557948 PPLO60437 1756 aa8.84□□□□□ -0.99
TRPM1-204ENST00000557948 VSIG10Q8N0Z9 540 aa8.84□□□□□ -0.99
TRPM1-204ENST00000557948 QSER1Q2KHR3 1735 aa8.83□□□□□ -1
TRPM1-204ENST00000557948 MNX1P50219 401 aaPredicted RBP8.83□□□□□ -1
TRPM1-204ENST00000557948 DCAF8Q5TAQ9 597 aa8.83□□□□□ -1
TRPM1-204ENST00000557948 C16orf71Q8IYS4 520 aaPredicted RBP8.83□□□□□ -1
TRPM1-204ENST00000557948 RBM46Q8TBY0 533 aaKnown RBP8.83□□□□□ -1
TRPM1-204ENST00000557948 KDM2AQ9Y2K7 1162 aa8.83□□□□□ -1
TRPM1-204ENST00000557948 ABCC11Q96J66 1382 aa8.83□□□□□ -1
TRPM1-204ENST00000557948 RPGRIP1LQ68CZ1 1315 aa8.82□□□□□ -1
TRPM1-204ENST00000557948 ACIN1Q9UKV3 1341 aaKnown RBP8.82□□□□□ -1
TRPM1-204ENST00000557948 GSE1Q14687 1217 aa8.82□□□□□ -1
TRPM1-204ENST00000557948 ZNF827Q17R98 1081 aa8.82□□□□□ -1
TRPM1-204ENST00000557948 BCL9O00512 1426 aa8.81□□□□□ -1
TRPM1-204ENST00000557948 ANKARQ7Z5J8 1434 aa8.81□□□□□ -1
TRPM1-204ENST00000557948 MARCH10Q8NA82 808 aaPredicted RBP8.81□□□□□ -1
TRPM1-204ENST00000557948 MLLT1Q03111 559 aaPredicted RBP8.8□□□□□ -1
TRPM1-204ENST00000557948 FSTL1Q12841 308 aa8.8□□□□□ -1
TRPM1-204ENST00000557948 SPRYD3Q8NCJ5 442 aa8.8□□□□□ -1
TRPM1-204ENST00000557948 LMO7Q8WWI1 1683 aa8.8□□□□□ -1
TRPM1-204ENST00000557948 KAT6BQ8WYB5 2073 aa8.8□□□□□ -1
TRPM1-204ENST00000557948 KIAA1210Q9ULL0 1709 aa8.8□□□□□ -1
TRPM1-204ENST00000557948 CRB1P82279 1406 aa8.8□□□□□ -1
TRPM1-204ENST00000557948 ANKRD30BQ9BXX2 1392 aa8.79□□□□□ -1
TRPM1-204ENST00000557948 FAM50AQ14320 339 aaKnown RBP8.79□□□□□ -1
TRPM1-204ENST00000557948 TMEM132EQ6IEE7 984 aa8.79□□□□□ -1
TRPM1-204ENST00000557948 NGDNQ8NEJ9 315 aaKnown RBP8.79□□□□□ -1
TRPM1-204ENST00000557948 NMRK2Q9NPI5 230 aa8.79□□□□□ -1
TRPM1-204ENST00000557948 TSHZ2Q9NRE2 1034 aa8.79□□□□□ -1
TRPM1-204ENST00000557948 WNK3Q9BYP7 1800 aa8.79□□□□□ -1
TRPM1-204ENST00000557948 PNPLA7Q6ZV29 1317 aa8.79□□□□□ -1
TRPM1-204ENST00000557948 COL5A2P05997 1499 aaPredicted RBP8.78□□□□□ -1
TRPM1-204ENST00000557948 TUBGCP6Q96RT7 1819 aa8.78□□□□□ -1
TRPM1-204ENST00000557948 PITPNM1O00562 1244 aa8.78□□□□□ -1
TRPM1-204ENST00000557948 NUTM2GQ5VZR2 741 aa8.78□□□□□ -1
TRPM1-204ENST00000557948 CD2APQ9Y5K6 639 aa8.78□□□□□ -1
TRPM1-204ENST00000557948 YTHDC2Q9H6S0 1430 aaKnown RBP8.78□□□□□ -1
TRPM1-204ENST00000557948 NHSQ6T4R5 1651 aa8.78□□□□□ -1
TRPM1-204ENST00000557948 USP19O94966 1318 aa8.78□□□□□ -1
TRPM1-204ENST00000557948 SAFB2Q14151 953 aaKnown RBP eCLIP8.77□□□□□ -1.01
TRPM1-204ENST00000557948 RASEFQ8IZ41 740 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms