RNA–Protein interactions for RNA: ENST00000557860.1

ACTC1-202, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 3

Gene ACTC1, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-202ENST00000557860 FNBP4Q8N3X1 1017 aaPredicted RBP8.35□□□□□ -1.07
ACTC1-202ENST00000557860 LRPPRCP42704 1394 aaKnown RBP8.35□□□□□ -1.07
ACTC1-202ENST00000557860 ABCC11Q96J66 1382 aa8.35□□□□□ -1.07
ACTC1-202ENST00000557860 TMC2Q8TDI7 906 aa8.34□□□□□ -1.07
ACTC1-202ENST00000557860 TECPR2O15040 1411 aa8.34□□□□□ -1.07
ACTC1-202ENST00000557860 MYOM2P54296 1465 aa8.33□□□□□ -1.08
ACTC1-202ENST00000557860 KIF3CO14782 793 aa8.33□□□□□ -1.08
ACTC1-202ENST00000557860 PIK3C2GO75747 1445 aa8.33□□□□□ -1.08
ACTC1-202ENST00000557860 FOXK1P85037 733 aa8.33□□□□□ -1.08
ACTC1-202ENST00000557860 DSG2Q14126 1118 aa8.33□□□□□ -1.08
ACTC1-202ENST00000557860 CFAP70Q5T0N1 1121 aa8.33□□□□□ -1.08
ACTC1-202ENST00000557860 KNDC1Q76NI1 1749 aa8.33□□□□□ -1.08
ACTC1-202ENST00000557860 YTHDC2Q9H6S0 1430 aaKnown RBP8.33□□□□□ -1.08
ACTC1-202ENST00000557860 C14orf93Q9H972 538 aaKnown RBP8.33□□□□□ -1.08
ACTC1-202ENST00000557860 FMN2Q9NZ56 1722 aa8.33□□□□□ -1.08
ACTC1-202ENST00000557860 ARIH1Q9Y4X5 557 aaPredicted RBP8.33□□□□□ -1.08
ACTC1-202ENST00000557860 BCL9LQ86UU0 1499 aa8.32□□□□□ -1.08
ACTC1-202ENST00000557860 ATRNO75882 1429 aa8.32□□□□□ -1.08
ACTC1-202ENST00000557860 SAFB2Q14151 953 aaKnown RBP eCLIP8.32□□□□□ -1.08
ACTC1-202ENST00000557860 KRT28Q7Z3Y7 464 aa8.32□□□□□ -1.08
ACTC1-202ENST00000557860 ATAD2Q6PL18 1390 aa8.32□□□□□ -1.08
ACTC1-202ENST00000557860 SPATA31A3Q5VYP0 1347 aa8.31□□□□□ -1.08
ACTC1-202ENST00000557860 C2orf72A6NCS6 295 aa8.31□□□□□ -1.08
ACTC1-202ENST00000557860 SIRT1Q96EB6 747 aa8.31□□□□□ -1.08
ACTC1-202ENST00000557860 GJD4Q96KN9 370 aaPredicted RBP8.31□□□□□ -1.08
ACTC1-202ENST00000557860 DHX57Q6P158 1386 aaKnown RBP8.31□□□□□ -1.08
ACTC1-202ENST00000557860 KIF1AQ12756 1690 aa8.3□□□□□ -1.08
ACTC1-202ENST00000557860 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
ACTC1-202ENST00000557860 TPRNQ4KMQ1 711 aa8.3□□□□□ -1.08
ACTC1-202ENST00000557860 LMOD2Q6P5Q4 547 aa8.3□□□□□ -1.08
ACTC1-202ENST00000557860 TMEM92Q6UXU6 159 aa8.3□□□□□ -1.08
ACTC1-202ENST00000557860 CABLES1Q8TDN4 633 aa8.3□□□□□ -1.08
ACTC1-202ENST00000557860 PRAM1Q96QH2 718 aa8.3□□□□□ -1.08
ACTC1-202ENST00000557860 UNC5CLQ8IV45 518 aa8.29□□□□□ -1.08
ACTC1-202ENST00000557860 POGKQ9P215 609 aa8.29□□□□□ -1.08
ACTC1-202ENST00000557860 NRXN1Q9ULB1 1477 aa8.28□□□□□ -1.08
ACTC1-202ENST00000557860 RAB3GAP2Q9H2M9 1393 aa8.28□□□□□ -1.08
ACTC1-202ENST00000557860 POTEB2H3BUK9 544 aa8.28□□□□□ -1.08
ACTC1-202ENST00000557860 PSME1Q06323 249 aa8.28□□□□□ -1.08
ACTC1-202ENST00000557860 PLPP6Q8IY26 295 aa8.28□□□□□ -1.08
ACTC1-202ENST00000557860 PMFBP1Q8TBY8 1022 aa8.28□□□□□ -1.08
ACTC1-202ENST00000557860 HIRIP3Q9BW71 556 aaPredicted RBP8.28□□□□□ -1.08
ACTC1-202ENST00000557860 BRWD3Q6RI45 1802 aa8.28□□□□□ -1.08
ACTC1-202ENST00000557860 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.28□□□□□ -1.08
ACTC1-202ENST00000557860 USP32Q8NFA0 1604 aa8.28□□□□□ -1.08
ACTC1-202ENST00000557860 SLIT2O94813 1529 aa8.28□□□□□ -1.08
ACTC1-202ENST00000557860 EP400Q96L91 3159 aa8.28□□□□□ -1.08
ACTC1-202ENST00000557860 ACIN1Q9UKV3 1341 aaKnown RBP8.28□□□□□ -1.08
ACTC1-202ENST00000557860 GLI3P10071 1580 aa8.27□□□□□ -1.09
ACTC1-202ENST00000557860 RALGAPBQ86X10 1494 aa8.27□□□□□ -1.09
ACTC1-202ENST00000557860 CCDC125Q86Z20 511 aa8.27□□□□□ -1.09
ACTC1-202ENST00000557860 EMILIN3Q9NT22 766 aa8.27□□□□□ -1.09
ACTC1-202ENST00000557860 TRAK1Q9UPV9 953 aa8.27□□□□□ -1.09
ACTC1-202ENST00000557860 TNS3Q68CZ2 1445 aa8.27□□□□□ -1.09
ACTC1-202ENST00000557860 DCAF11Q8TEB1 546 aa8.26□□□□□ -1.09
ACTC1-202ENST00000557860 CCDC9Q9Y3X0 531 aaKnown RBP8.26□□□□□ -1.09
ACTC1-202ENST00000557860 MINK1Q8N4C8 1332 aaPredicted RBP8.26□□□□□ -1.09
ACTC1-202ENST00000557860 PLCH1Q4KWH8 1693 aa8.25□□□□□ -1.09
ACTC1-202ENST00000557860 TESPA1A2RU30 521 aaPredicted RBP8.25□□□□□ -1.09
ACTC1-202ENST00000557860 FAM83GA6ND36 823 aa8.25□□□□□ -1.09
ACTC1-202ENST00000557860 SEMA3EO15041 775 aa8.25□□□□□ -1.09
ACTC1-202ENST00000557860 C3orf67Q6ZVT6 689 aa8.25□□□□□ -1.09
ACTC1-202ENST00000557860 SEPT12Q8IYM1 358 aa8.25□□□□□ -1.09
ACTC1-202ENST00000557860 ABCA3Q99758 1704 aa8.25□□□□□ -1.09
ACTC1-202ENST00000557860 DLC1Q96QB1 1528 aa8.24□□□□□ -1.09
ACTC1-202ENST00000557860 SBNO1A3KN83 1393 aa8.24□□□□□ -1.09
ACTC1-202ENST00000557860 NWD2Q9ULI1 1742 aa8.24□□□□□ -1.09
ACTC1-202ENST00000557860 ADGRB1O14514 1584 aa8.24□□□□□ -1.09
ACTC1-202ENST00000557860 VPS72Q15906 364 aa8.24□□□□□ -1.09
ACTC1-202ENST00000557860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.24□□□□□ -1.09
ACTC1-202ENST00000557860 PRR36Q9H6K5 1346 aa8.24□□□□□ -1.09
ACTC1-202ENST00000557860 ARHGEF10O15013 1369 aa8.23□□□□□ -1.09
ACTC1-202ENST00000557860 ANKARQ7Z5J8 1434 aa8.23□□□□□ -1.09
ACTC1-202ENST00000557860 SRCAPQ6ZRS2 3230 aa8.23□□□□□ -1.09
ACTC1-202ENST00000557860 DEFB132Q7Z7B7 95 aa8.23□□□□□ -1.09
ACTC1-202ENST00000557860 TRPM3Q9HCF6 1732 aaPredicted RBP8.23□□□□□ -1.09
ACTC1-202ENST00000557860 GPRASP1Q5JY77 1395 aa8.22□□□□□ -1.09
ACTC1-202ENST00000557860 ADGRB2O60241 1585 aa8.22□□□□□ -1.09
ACTC1-202ENST00000557860 BLMP54132 1417 aaPredicted RBP8.22□□□□□ -1.09
ACTC1-202ENST00000557860 ALS2Q96Q42 1657 aa8.22□□□□□ -1.09
ACTC1-202ENST00000557860 A0A0G2JS52 829 aa8.22□□□□□ -1.09
ACTC1-202ENST00000557860 WASLO00401 505 aaPredicted RBP8.22□□□□□ -1.09
ACTC1-202ENST00000557860 DPYSL4O14531 572 aa8.22□□□□□ -1.09
ACTC1-202ENST00000557860 ONECUT3O60422 494 aaPredicted RBP8.22□□□□□ -1.09
ACTC1-202ENST00000557860 MYT1Q01538 1121 aa8.22□□□□□ -1.09
ACTC1-202ENST00000557860 SF3B2Q13435 895 aaKnown RBP8.22□□□□□ -1.09
ACTC1-202ENST00000557860 KRT27Q7Z3Y8 459 aa8.22□□□□□ -1.09
ACTC1-202ENST00000557860 NGDNQ8NEJ9 315 aaKnown RBP8.22□□□□□ -1.09
ACTC1-202ENST00000557860 BTG4Q9NY30 223 aa8.22□□□□□ -1.09
ACTC1-202ENST00000557860 POTEJP0CG39 1038 aa8.21□□□□□ -1.1
ACTC1-202ENST00000557860 FAM98CQ17RN3 349 aaKnown RBP8.21□□□□□ -1.1
ACTC1-202ENST00000557860 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.21□□□□□ -1.1
ACTC1-202ENST00000557860 NRAPQ86VF7 1730 aa8.2□□□□□ -1.1
ACTC1-202ENST00000557860 TULP4Q9NRJ4 1543 aa8.2□□□□□ -1.1
ACTC1-202ENST00000557860 SPDYE16A6NNV3 312 aaPredicted RBP8.2□□□□□ -1.1
ACTC1-202ENST00000557860 TULP1O00294 542 aaPredicted RBP8.2□□□□□ -1.1
ACTC1-202ENST00000557860 PDIA6Q15084 440 aa8.2□□□□□ -1.1
ACTC1-202ENST00000557860 FAM182BQ5T319 152 aa8.2□□□□□ -1.1
ACTC1-202ENST00000557860 ARHGEF28Q8N1W1 1705 aaKnown RBP8.2□□□□□ -1.1
ACTC1-202ENST00000557860 COL14A1Q05707 1796 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms