RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 IRX5P78411 483 aaPredicted RBP12.67□□□□□ -0.38
CHD8-214ENST00000557727 PMFBP1Q8TBY8 1022 aa12.66□□□□□ -0.38
CHD8-214ENST00000557727 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
CHD8-214ENST00000557727 ACEP12821 1306 aa12.65□□□□□ -0.38
CHD8-214ENST00000557727 NPHP3Q7Z494 1330 aa12.65□□□□□ -0.38
CHD8-214ENST00000557727 PIK3C2AO00443 1686 aa12.65□□□□□ -0.38
CHD8-214ENST00000557727 USP54Q70EL1 1684 aa12.65□□□□□ -0.38
CHD8-214ENST00000557727 USP6P35125 1406 aa12.64□□□□□ -0.39
CHD8-214ENST00000557727 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
CHD8-214ENST00000557727 ZEB1P37275 1124 aaPredicted RBP12.64□□□□□ -0.39
CHD8-214ENST00000557727 TMF1P82094 1093 aa12.64□□□□□ -0.39
CHD8-214ENST00000557727 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
CHD8-214ENST00000557727 CABP1Q9NZU7 370 aa12.64□□□□□ -0.39
CHD8-214ENST00000557727 SLC24A1O60721 1099 aa12.63□□□□□ -0.39
CHD8-214ENST00000557727 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
CHD8-214ENST00000557727 SBNO1A3KN83 1393 aa12.63□□□□□ -0.39
CHD8-214ENST00000557727 PNPLA6Q8IY17 1366 aa12.63□□□□□ -0.39
CHD8-214ENST00000557727 MED1Q15648 1581 aaPredicted RBP12.63□□□□□ -0.39
CHD8-214ENST00000557727 TNS3Q68CZ2 1445 aa12.62□□□□□ -0.39
CHD8-214ENST00000557727 A0A1W2PP64 1363 aa12.62□□□□□ -0.39
CHD8-214ENST00000557727 NINLQ9Y2I6 1382 aa12.62□□□□□ -0.39
CHD8-214ENST00000557727 SLC12A5Q9H2X9 1139 aa12.62□□□□□ -0.39
CHD8-214ENST00000557727 OCEL1Q9H607 264 aa12.62□□□□□ -0.39
CHD8-214ENST00000557727 PHRF1Q9P1Y6 1649 aaKnown RBP12.62□□□□□ -0.39
CHD8-214ENST00000557727 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
CHD8-214ENST00000557727 KRT28Q7Z3Y7 464 aa12.61□□□□□ -0.39
CHD8-214ENST00000557727 LRP6O75581 1613 aa12.61□□□□□ -0.39
CHD8-214ENST00000557727 KIF7Q2M1P5 1343 aa12.61□□□□□ -0.39
CHD8-214ENST00000557727 JCADQ9P266 1359 aa12.6□□□□□ -0.39
CHD8-214ENST00000557727 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
CHD8-214ENST00000557727 WASHC2AQ641Q2 1341 aa12.6□□□□□ -0.39
CHD8-214ENST00000557727 ANKRD36BQ8N2N9 1353 aa12.59□□□□□ -0.39
CHD8-214ENST00000557727 NGDNQ8NEJ9 315 aaKnown RBP12.59□□□□□ -0.39
CHD8-214ENST00000557727 BRD4O60885 1362 aaPredicted RBP12.58□□□□□ -0.4
CHD8-214ENST00000557727 CCDC7Q96M83 1385 aa12.58□□□□□ -0.4
CHD8-214ENST00000557727 PSME1Q06323 249 aa12.58□□□□□ -0.4
CHD8-214ENST00000557727 CDCA8Q53HL2 280 aa12.58□□□□□ -0.4
CHD8-214ENST00000557727 LRRC59Q96AG4 307 aaKnown RBP12.58□□□□□ -0.4
CHD8-214ENST00000557727 EDC4Q6P2E9 1401 aaKnown RBP12.57□□□□□ -0.4
CHD8-214ENST00000557727 SLAIN1Q8ND83 568 aa12.57□□□□□ -0.4
CHD8-214ENST00000557727 ANKRD26Q9UPS8 1709 aa12.57□□□□□ -0.4
CHD8-214ENST00000557727 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
CHD8-214ENST00000557727 TMC1Q8TDI8 760 aa12.56□□□□□ -0.4
CHD8-214ENST00000557727 CARD14Q9BXL6 1004 aa12.56□□□□□ -0.4
CHD8-214ENST00000557727 SLIT3O75094 1523 aa12.56□□□□□ -0.4
CHD8-214ENST00000557727 TTC21BQ7Z4L5 1316 aa12.56□□□□□ -0.4
CHD8-214ENST00000557727 ARHGEF10O15013 1369 aa12.56□□□□□ -0.4
CHD8-214ENST00000557727 USP19O94966 1318 aa12.54□□□□□ -0.4
CHD8-214ENST00000557727 SPATA31A6Q5VVP1 1343 aa12.54□□□□□ -0.4
CHD8-214ENST00000557727 OVOS2A0A0J9YW53 1432 aa12.54□□□□□ -0.4
CHD8-214ENST00000557727 OVOS2Q6IE36 1432 aa12.54□□□□□ -0.4
CHD8-214ENST00000557727 NFAT5O94916 1531 aa12.53□□□□□ -0.4
CHD8-214ENST00000557727 IFNLR1Q8IU57 520 aaPredicted RBP12.53□□□□□ -0.4
CHD8-214ENST00000557727 SPOCK2Q92563 424 aa12.53□□□□□ -0.4
CHD8-214ENST00000557727 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
CHD8-214ENST00000557727 TTC21AQ8NDW8 1320 aa12.53□□□□□ -0.4
CHD8-214ENST00000557727 USP31Q70CQ4 1352 aa12.53□□□□□ -0.4
CHD8-214ENST00000557727 COL18A1P39060 1754 aa12.53□□□□□ -0.4
CHD8-214ENST00000557727 PLCH1Q4KWH8 1693 aa12.52□□□□□ -0.4
CHD8-214ENST00000557727 LTN1O94822 1766 aa12.52□□□□□ -0.41
CHD8-214ENST00000557727 NSD3Q9BZ95 1437 aa12.52□□□□□ -0.41
CHD8-214ENST00000557727 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
CHD8-214ENST00000557727 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
CHD8-214ENST00000557727 CABLES1Q8TDN4 633 aa12.51□□□□□ -0.41
CHD8-214ENST00000557727 NRAPQ86VF7 1730 aa12.51□□□□□ -0.41
CHD8-214ENST00000557727 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
CHD8-214ENST00000557727 NUTM2GQ5VZR2 741 aa12.5□□□□□ -0.41
CHD8-214ENST00000557727 NME9Q86XW9 330 aa12.5□□□□□ -0.41
CHD8-214ENST00000557727 NWD2Q9ULI1 1742 aa12.5□□□□□ -0.41
CHD8-214ENST00000557727 COL14A1Q05707 1796 aaKnown RBP12.49□□□□□ -0.41
CHD8-214ENST00000557727 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.49□□□□□ -0.41
CHD8-214ENST00000557727 PER1O15534 1290 aaPredicted RBP12.49□□□□□ -0.41
CHD8-214ENST00000557727 PSEN1P49768 467 aa12.49□□□□□ -0.41
CHD8-214ENST00000557727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHD8-214ENST00000557727 ABTB2Q8N961 1025 aa12.49□□□□□ -0.41
CHD8-214ENST00000557727 POLR3GLQ9BT43 218 aa12.49□□□□□ -0.41
CHD8-214ENST00000557727 PANK3Q9H999 370 aa12.49□□□□□ -0.41
CHD8-214ENST00000557727 FYB1O15117 783 aa12.48□□□□□ -0.41
CHD8-214ENST00000557727 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
CHD8-214ENST00000557727 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
CHD8-214ENST00000557727 MAP2P11137 1827 aaKnown RBP12.47□□□□□ -0.41
CHD8-214ENST00000557727 LMOD2Q6P5Q4 547 aa12.47□□□□□ -0.41
CHD8-214ENST00000557727 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
CHD8-214ENST00000557727 SLIT2O94813 1529 aa12.47□□□□□ -0.41
CHD8-214ENST00000557727 CPDO75976 1380 aa12.46□□□□□ -0.41
CHD8-214ENST00000557727 PEAK1Q9H792 1746 aa12.46□□□□□ -0.41
CHD8-214ENST00000557727 NUTM2BA6NNL0 878 aaPredicted RBP12.46□□□□□ -0.41
CHD8-214ENST00000557727 NUTM2EB1AL46 878 aaPredicted RBP12.46□□□□□ -0.41
CHD8-214ENST00000557727 NLRP6P59044 892 aa12.46□□□□□ -0.41
CHD8-214ENST00000557727 NUTM2AQ8IVF1 878 aaPredicted RBP12.46□□□□□ -0.41
CHD8-214ENST00000557727 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
CHD8-214ENST00000557727 ST18O60284 1047 aa12.45□□□□□ -0.42
CHD8-214ENST00000557727 PDAP1Q13442 181 aaKnown RBP12.45□□□□□ -0.42
CHD8-214ENST00000557727 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
CHD8-214ENST00000557727 NLRP13Q86W25 1043 aa12.45□□□□□ -0.42
CHD8-214ENST00000557727 RGS17Q9UGC6 210 aaPredicted RBP12.45□□□□□ -0.42
CHD8-214ENST00000557727 BCL9LQ86UU0 1499 aa12.45□□□□□ -0.42
CHD8-214ENST00000557727 ABCC6O95255 1503 aa12.44□□□□□ -0.42
CHD8-214ENST00000557727 GCP02774 474 aa12.44□□□□□ -0.42
CHD8-214ENST00000557727 GGNBP2Q9H3C7 697 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms