RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 SMCPP49901 116 aaPredicted RBP10.78□□□□□ -0.68
GPHN-215ENST00000557654 WDR4P57081 412 aaKnown RBP10.78□□□□□ -0.68
GPHN-215ENST00000557654 FLIIQ13045 1269 aa10.78□□□□□ -0.68
GPHN-215ENST00000557654 CTC1Q2NKJ3 1217 aa10.78□□□□□ -0.68
GPHN-215ENST00000557654 PRM3Q9NNZ6 103 aa10.78□□□□□ -0.68
GPHN-215ENST00000557654 TIMP2P16035 220 aa10.77□□□□□ -0.69
GPHN-215ENST00000557654 VAC14Q08AM6 782 aa10.77□□□□□ -0.69
GPHN-215ENST00000557654 INTS6LQ5JSJ4 861 aaKnown RBP10.77□□□□□ -0.69
GPHN-215ENST00000557654 ITPKCQ96DU7 683 aa10.77□□□□□ -0.69
GPHN-215ENST00000557654 KLF16Q9BXK1 252 aaPredicted RBP10.77□□□□□ -0.69
GPHN-215ENST00000557654 ZFAND3Q9H8U3 227 aa10.77□□□□□ -0.69
GPHN-215ENST00000557654 CAPN5O15484 640 aaPredicted RBP10.76□□□□□ -0.69
GPHN-215ENST00000557654 ZIC2O95409 532 aaPredicted RBP10.76□□□□□ -0.69
GPHN-215ENST00000557654 UBTFP17480 764 aaKnown RBP10.76□□□□□ -0.69
GPHN-215ENST00000557654 POTECB2RU33 542 aa10.75□□□□□ -0.69
GPHN-215ENST00000557654 BMP1P13497 986 aa10.75□□□□□ -0.69
GPHN-215ENST00000557654 CCDC116Q8IYX3 515 aa10.75□□□□□ -0.69
GPHN-215ENST00000557654 GIGYF1O75420 1035 aaPredicted RBP10.74□□□□□ -0.69
GPHN-215ENST00000557654 NBPF20Q3BBV1 942 aa10.74□□□□□ -0.69
GPHN-215ENST00000557654 CDV3Q9UKY7 258 aaKnown RBP10.74□□□□□ -0.69
GPHN-215ENST00000557654 PPP1R26Q5T8A7 1209 aaPredicted RBP10.73□□□□□ -0.69
GPHN-215ENST00000557654 CLUAP1Q96AJ1 413 aa10.73□□□□□ -0.69
GPHN-215ENST00000557654 ATP13A2Q9NQ11 1180 aa10.72□□□□□ -0.69
GPHN-215ENST00000557654 TMPRSS4Q9NRS4 437 aa10.72□□□□□ -0.69
GPHN-215ENST00000557654 ESPNB1AK53 854 aa10.71□□□□□ -0.69
GPHN-215ENST00000557654 TRIM46Q7Z4K8 759 aa10.71□□□□□ -0.69
GPHN-215ENST00000557654 GMPR2Q9P2T1 348 aaKnown RBP10.71□□□□□ -0.69
GPHN-215ENST00000557654 ERVH48-1M5A8F1 160 aa10.7□□□□□ -0.7
GPHN-215ENST00000557654 RAD21O60216 631 aa10.7□□□□□ -0.7
GPHN-215ENST00000557654 CBLBQ13191 982 aa10.69□□□□□ -0.7
GPHN-215ENST00000557654 ZNF330Q9Y3S2 320 aaPredicted RBP10.69□□□□□ -0.7
GPHN-215ENST00000557654 EMILIN1Q9Y6C2 1016 aa10.69□□□□□ -0.7
GPHN-215ENST00000557654 POM121CA8CG34 1229 aa10.66□□□□□ -0.7
GPHN-215ENST00000557654 EIF4G2P78344 907 aaKnown RBP eCLIP10.66□□□□□ -0.7
GPHN-215ENST00000557654 DHX9Q08211 1270 aaKnown RBP10.66□□□□□ -0.7
GPHN-215ENST00000557654 WASHC4Q2M389 1173 aa10.66□□□□□ -0.7
GPHN-215ENST00000557654 ZNF787Q6DD87 383 aa10.66□□□□□ -0.7
GPHN-215ENST00000557654 ZNF784Q8NCA9 323 aaPredicted RBP10.66□□□□□ -0.7
GPHN-215ENST00000557654 CEP126Q9P2H0 1117 aa10.66□□□□□ -0.7
GPHN-215ENST00000557654 MRPL14Q6P1L8 145 aaKnown RBP10.65□□□□□ -0.7
GPHN-215ENST00000557654 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.7
GPHN-215ENST00000557654 C6orf118Q5T5N4 469 aa10.64□□□□□ -0.71
GPHN-215ENST00000557654 MEIOBQ8N635 442 aa10.64□□□□□ -0.71
GPHN-215ENST00000557654 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
GPHN-215ENST00000557654 CYLDQ9NQC7 956 aa10.64□□□□□ -0.71
GPHN-215ENST00000557654 MCCD1P59942 119 aaPredicted RBP10.63□□□□□ -0.71
GPHN-215ENST00000557654 SEPT12Q8IYM1 358 aa10.63□□□□□ -0.71
GPHN-215ENST00000557654 ZFP42Q96MM3 310 aa10.63□□□□□ -0.71
GPHN-215ENST00000557654 LILRA1O75019 489 aa10.62□□□□□ -0.71
GPHN-215ENST00000557654 SNRPBP14678 240 aaKnown RBP10.62□□□□□ -0.71
GPHN-215ENST00000557654 ADD1P35611 737 aaKnown RBP10.62□□□□□ -0.71
GPHN-215ENST00000557654 TSGA10IPQ3SY00 556 aa10.62□□□□□ -0.71
GPHN-215ENST00000557654 AGBL1Q96MI9 1066 aa10.62□□□□□ -0.71
GPHN-215ENST00000557654 CCDC85AQ96PX6 553 aaPredicted RBP10.62□□□□□ -0.71
GPHN-215ENST00000557654 C11orf95C9JLR9 678 aaPredicted RBP10.61□□□□□ -0.71
GPHN-215ENST00000557654 LINC00528Q8N1L1 170 aa10.61□□□□□ -0.71
GPHN-215ENST00000557654 PCDHB11Q9Y5F2 797 aa10.61□□□□□ -0.71
GPHN-215ENST00000557654 GTF3C3Q9Y5Q9 886 aa10.61□□□□□ -0.71
GPHN-215ENST00000557654 SCTRP47872 440 aa10.6□□□□□ -0.71
GPHN-215ENST00000557654 SEMA3FQ13275 785 aa10.6□□□□□ -0.71
GPHN-215ENST00000557654 Q6ZVU0 165 aa10.6□□□□□ -0.71
GPHN-215ENST00000557654 PROSER2Q86WR7 435 aaPredicted RBP10.6□□□□□ -0.71
GPHN-215ENST00000557654 WWC1Q8IX03 1113 aa10.6□□□□□ -0.71
GPHN-215ENST00000557654 FNBP4Q8N3X1 1017 aaPredicted RBP10.6□□□□□ -0.71
GPHN-215ENST00000557654 ADAMTS19Q8TE59 1207 aa10.6□□□□□ -0.71
GPHN-215ENST00000557654 ZNF592Q92610 1267 aa10.6□□□□□ -0.71
GPHN-215ENST00000557654 CDCA7Q9BWT1 371 aaPredicted RBP10.6□□□□□ -0.71
GPHN-215ENST00000557654 RNF20Q5VTR2 975 aa10.59□□□□□ -0.71
GPHN-215ENST00000557654 PHTF2Q8N3S3 785 aa10.59□□□□□ -0.71
GPHN-215ENST00000557654 TRIM47Q96LD4 638 aa10.59□□□□□ -0.71
GPHN-215ENST00000557654 PIK3CDO00329 1044 aa10.58□□□□□ -0.72
GPHN-215ENST00000557654 BMP2P12643 396 aa10.58□□□□□ -0.72
GPHN-215ENST00000557654 RELBQ01201 579 aa10.58□□□□□ -0.72
GPHN-215ENST00000557654 SCARF1Q14162 830 aa10.58□□□□□ -0.72
GPHN-215ENST00000557654 ALG2Q9H553 416 aa10.58□□□□□ -0.72
GPHN-215ENST00000557654 SLFNL1Q499Z3 407 aa10.57□□□□□ -0.72
GPHN-215ENST00000557654 RNF135Q8IUD6 432 aa10.57□□□□□ -0.72
GPHN-215ENST00000557654 SENP2Q9HC62 589 aa10.57□□□□□ -0.72
GPHN-215ENST00000557654 SOBPA7XYQ1 873 aa10.56□□□□□ -0.72
GPHN-215ENST00000557654 KDF1Q8NAX2 398 aaPredicted RBP10.56□□□□□ -0.72
GPHN-215ENST00000557654 ZNF395Q9H8N7 513 aaPredicted RBP10.56□□□□□ -0.72
GPHN-215ENST00000557654 A6NJR5 290 aa10.55□□□□□ -0.72
GPHN-215ENST00000557654 UPP2O95045 317 aa10.55□□□□□ -0.72
GPHN-215ENST00000557654 ADH1AP07327 375 aa10.55□□□□□ -0.72
GPHN-215ENST00000557654 SOX11P35716 441 aa10.55□□□□□ -0.72
GPHN-215ENST00000557654 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
GPHN-215ENST00000557654 TSEN34Q9BSV6 310 aaKnown RBP10.55□□□□□ -0.72
GPHN-215ENST00000557654 CC2D2BQ6DHV5 1058 aa10.54□□□□□ -0.72
GPHN-215ENST00000557654 DOLKQ9UPQ8 538 aa10.54□□□□□ -0.72
GPHN-215ENST00000557654 HDGFL1Q5TGJ6 251 aa10.53□□□□□ -0.72
GPHN-215ENST00000557654 KIFC2Q96AC6 838 aa10.53□□□□□ -0.72
GPHN-215ENST00000557654 OXLD1Q5BKU9 147 aa10.52□□□□□ -0.73
GPHN-215ENST00000557654 INSM2Q96T92 566 aaPredicted RBP10.52□□□□□ -0.73
GPHN-215ENST00000557654 OSBPL3Q9H4L5 887 aa10.52□□□□□ -0.73
GPHN-215ENST00000557654 SPINT1O43278 529 aa10.51□□□□□ -0.73
GPHN-215ENST00000557654 PLPP7Q8NBV4 271 aa10.51□□□□□ -0.73
GPHN-215ENST00000557654 CHIC2Q9UKJ5 165 aa10.51□□□□□ -0.73
GPHN-215ENST00000557654 PTGIRP43119 386 aa10.5□□□□□ -0.73
GPHN-215ENST00000557654 CTSOP43234 321 aaPredicted RBP10.5□□□□□ -0.73
GPHN-215ENST00000557654 CCDC125Q86Z20 511 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms