RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
SPTLC2-206ENST00000557566 NUTM2FA1L443 756 aa10.4□□□□□ -0.74
SPTLC2-206ENST00000557566 STK25O00506 426 aa10.4□□□□□ -0.74
SPTLC2-206ENST00000557566 KCNQ2O43526 872 aa10.4□□□□□ -0.74
SPTLC2-206ENST00000557566 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
SPTLC2-206ENST00000557566 KRT28Q7Z3Y7 464 aa10.4□□□□□ -0.74
SPTLC2-206ENST00000557566 SPRYD3Q8NCJ5 442 aa10.4□□□□□ -0.74
SPTLC2-206ENST00000557566 CABLES1Q8TDN4 633 aa10.4□□□□□ -0.74
SPTLC2-206ENST00000557566 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
SPTLC2-206ENST00000557566 TMEM106CQ9BVX2 250 aa10.4□□□□□ -0.74
SPTLC2-206ENST00000557566 CLTCL1P53675 1640 aa10.4□□□□□ -0.75
SPTLC2-206ENST00000557566 FMN2Q9NZ56 1722 aa10.39□□□□□ -0.75
SPTLC2-206ENST00000557566 TRIM37O94972 964 aa10.39□□□□□ -0.75
SPTLC2-206ENST00000557566 APBA3O96018 575 aa10.39□□□□□ -0.75
SPTLC2-206ENST00000557566 PSME1Q06323 249 aa10.39□□□□□ -0.75
SPTLC2-206ENST00000557566 FAM50AQ14320 339 aaKnown RBP10.39□□□□□ -0.75
SPTLC2-206ENST00000557566 FAM196AQ6ZSG2 479 aa10.39□□□□□ -0.75
SPTLC2-206ENST00000557566 COL14A1Q05707 1796 aaKnown RBP10.39□□□□□ -0.75
SPTLC2-206ENST00000557566 FAM83GA6ND36 823 aa10.38□□□□□ -0.75
SPTLC2-206ENST00000557566 GOLGA2Q08379 1002 aa10.38□□□□□ -0.75
SPTLC2-206ENST00000557566 BTG4Q9NY30 223 aa10.38□□□□□ -0.75
SPTLC2-206ENST00000557566 STK24Q9Y6E0 443 aa10.38□□□□□ -0.75
SPTLC2-206ENST00000557566 ARHGEF10O15013 1369 aa10.38□□□□□ -0.75
SPTLC2-206ENST00000557566 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
SPTLC2-206ENST00000557566 SPATA31A5Q5VU36 1347 aa10.36□□□□□ -0.75
SPTLC2-206ENST00000557566 SPATA31A7Q8IWB4 1347 aa10.36□□□□□ -0.75
SPTLC2-206ENST00000557566 TIE1P35590 1138 aa10.36□□□□□ -0.75
SPTLC2-206ENST00000557566 VSIG10Q8N0Z9 540 aa10.36□□□□□ -0.75
SPTLC2-206ENST00000557566 BCL11BQ9C0K0 894 aaPredicted RBP10.36□□□□□ -0.75
SPTLC2-206ENST00000557566 RGPD8O14715 1765 aaPredicted RBP10.36□□□□□ -0.75
SPTLC2-206ENST00000557566 SBNO1A3KN83 1393 aa10.36□□□□□ -0.75
SPTLC2-206ENST00000557566 RRBP1Q9P2E9 1410 aaKnown RBP10.35□□□□□ -0.75
SPTLC2-206ENST00000557566 CDAN1Q8IWY9 1227 aa10.35□□□□□ -0.75
SPTLC2-206ENST00000557566 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
SPTLC2-206ENST00000557566 ROCK1Q13464 1354 aa10.35□□□□□ -0.75
SPTLC2-206ENST00000557566 NRKQ7Z2Y5 1582 aa10.35□□□□□ -0.75
SPTLC2-206ENST00000557566 PPLO60437 1756 aa10.34□□□□□ -0.75
SPTLC2-206ENST00000557566 IFT172Q9UG01 1749 aa10.34□□□□□ -0.75
SPTLC2-206ENST00000557566 TECPR2O15040 1411 aa10.33□□□□□ -0.76
SPTLC2-206ENST00000557566 KNDC1Q76NI1 1749 aa10.33□□□□□ -0.76
SPTLC2-206ENST00000557566 TTLL13PA6NNM8 815 aa10.33□□□□□ -0.76
SPTLC2-206ENST00000557566 SEC24BO95487 1268 aa10.33□□□□□ -0.76
SPTLC2-206ENST00000557566 CABP2Q9NPB3 220 aa10.33□□□□□ -0.76
SPTLC2-206ENST00000557566 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
SPTLC2-206ENST00000557566 RPGRIP1LQ68CZ1 1315 aa10.33□□□□□ -0.76
SPTLC2-206ENST00000557566 CASZ1Q86V15 1759 aa10.32□□□□□ -0.76
SPTLC2-206ENST00000557566 MYOM1P52179 1685 aa10.32□□□□□ -0.76
SPTLC2-206ENST00000557566 NRXN1Q9ULB1 1477 aa10.32□□□□□ -0.76
SPTLC2-206ENST00000557566 GIGYF1O75420 1035 aaPredicted RBP10.32□□□□□ -0.76
SPTLC2-206ENST00000557566 NKX1-1Q15270 411 aaPredicted RBP10.32□□□□□ -0.76
SPTLC2-206ENST00000557566 WAPLQ7Z5K2 1190 aa10.32□□□□□ -0.76
SPTLC2-206ENST00000557566 COLQQ9Y215 455 aaPredicted RBP10.32□□□□□ -0.76
SPTLC2-206ENST00000557566 TRIM35Q9UPQ4 493 aa10.31□□□□□ -0.76
SPTLC2-206ENST00000557566 RGPD3A6NKT7 1758 aaPredicted RBP10.31□□□□□ -0.76
SPTLC2-206ENST00000557566 RGPD4Q7Z3J3 1758 aa10.31□□□□□ -0.76
SPTLC2-206ENST00000557566 SPATA31A1Q5TZJ5 1347 aa10.31□□□□□ -0.76
SPTLC2-206ENST00000557566 STK26Q9P289 416 aa10.3□□□□□ -0.76
SPTLC2-206ENST00000557566 PLEKHH1Q9ULM0 1364 aa10.29□□□□□ -0.76
SPTLC2-206ENST00000557566 ALS2Q96Q42 1657 aa10.29□□□□□ -0.76
SPTLC2-206ENST00000557566 MKRN3Q13064 507 aaKnown RBP10.29□□□□□ -0.76
SPTLC2-206ENST00000557566 PDE3BQ13370 1112 aa10.29□□□□□ -0.76
SPTLC2-206ENST00000557566 TRPM3Q9HCF6 1732 aaPredicted RBP10.29□□□□□ -0.76
SPTLC2-206ENST00000557566 ABCC11Q96J66 1382 aa10.28□□□□□ -0.76
SPTLC2-206ENST00000557566 CRYBG1Q9Y4K1 1723 aa10.28□□□□□ -0.76
SPTLC2-206ENST00000557566 PRDM11Q9NQV5 511 aa10.28□□□□□ -0.76
SPTLC2-206ENST00000557566 GOLGB1Q14789 3259 aaKnown RBP10.28□□□□□ -0.76
SPTLC2-206ENST00000557566 GTPBP6O43824 516 aaPredicted RBP10.27□□□□□ -0.77
SPTLC2-206ENST00000557566 SYT17Q9BSW7 474 aa10.27□□□□□ -0.77
SPTLC2-206ENST00000557566 DLC1Q96QB1 1528 aa10.27□□□□□ -0.77
SPTLC2-206ENST00000557566 PTGER2P43116 358 aa10.26□□□□□ -0.77
SPTLC2-206ENST00000557566 FHDC1Q9C0D6 1143 aaPredicted RBP10.26□□□□□ -0.77
SPTLC2-206ENST00000557566 RYDENQ9NUL5 291 aaKnown RBP10.26□□□□□ -0.77
SPTLC2-206ENST00000557566 C11orf95C9JLR9 678 aaPredicted RBP10.25□□□□□ -0.77
SPTLC2-206ENST00000557566 ZBTB7AO95365 584 aa10.25□□□□□ -0.77
SPTLC2-206ENST00000557566 BARGINQ6ZT62 677 aa10.25□□□□□ -0.77
SPTLC2-206ENST00000557566 STRN4Q9NRL3 753 aa10.25□□□□□ -0.77
SPTLC2-206ENST00000557566 GPRASP1Q5JY77 1395 aa10.25□□□□□ -0.77
SPTLC2-206ENST00000557566 EFCAB3Q8N7B9 438 aa10.24□□□□□ -0.77
SPTLC2-206ENST00000557566 PMFBP1Q8TBY8 1022 aa10.24□□□□□ -0.77
SPTLC2-206ENST00000557566 ANO8Q9HCE9 1232 aaPredicted RBP10.24□□□□□ -0.77
SPTLC2-206ENST00000557566 USP35Q9P2H5 1018 aa10.24□□□□□ -0.77
SPTLC2-206ENST00000557566 SBF2Q86WG5 1849 aa10.23□□□□□ -0.77
SPTLC2-206ENST00000557566 PLSCR1O15162 318 aa10.23□□□□□ -0.77
SPTLC2-206ENST00000557566 TSHZ2Q9NRE2 1034 aa10.23□□□□□ -0.77
SPTLC2-206ENST00000557566 ANKARQ7Z5J8 1434 aa10.23□□□□□ -0.77
SPTLC2-206ENST00000557566 YTHDC2Q9H6S0 1430 aaKnown RBP10.23□□□□□ -0.77
SPTLC2-206ENST00000557566 PARP4Q9UKK3 1724 aaKnown RBP10.22□□□□□ -0.77
SPTLC2-206ENST00000557566 TMEM132EQ6IEE7 984 aa10.22□□□□□ -0.77
SPTLC2-206ENST00000557566 SLAIN1Q8ND83 568 aa10.22□□□□□ -0.77
SPTLC2-206ENST00000557566 SIRT1Q96EB6 747 aa10.22□□□□□ -0.77
SPTLC2-206ENST00000557566 PDGFDQ9GZP0 370 aaPredicted RBP10.22□□□□□ -0.77
SPTLC2-206ENST00000557566 KDM2AQ9Y2K7 1162 aa10.22□□□□□ -0.77
SPTLC2-206ENST00000557566 ADGRF5Q8IZF2 1346 aa10.22□□□□□ -0.77
SPTLC2-206ENST00000557566 KIAA0232Q92628 1395 aa10.22□□□□□ -0.77
SPTLC2-206ENST00000557566 PHRF1Q9P1Y6 1649 aaKnown RBP10.22□□□□□ -0.77
SPTLC2-206ENST00000557566 SHANK3Q9BYB0 1731 aa10.21□□□□□ -0.77
SPTLC2-206ENST00000557566 ST18O60284 1047 aa10.21□□□□□ -0.77
SPTLC2-206ENST00000557566 OVOS2A0A0G2JMS6 1433 aa10.21□□□□□ -0.78
SPTLC2-206ENST00000557566 OVOS2A0A0J9YW53 1432 aa10.21□□□□□ -0.78
SPTLC2-206ENST00000557566 OVOS2Q6IE36 1432 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms