RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 CABP1Q9NZU7 370 aa14.27□□□□□ -0.13
NEK9-210ENST00000557026 PPP2R1AP30153 589 aa14.27□□□□□ -0.13
NEK9-210ENST00000557026 NUDT16Q96DE0 195 aaKnown RBP14.27□□□□□ -0.13
NEK9-210ENST00000557026 BMP2KQ9NSY1 1161 aaPredicted RBP14.27□□□□□ -0.13
NEK9-210ENST00000557026 EHMT1Q9H9B1 1298 aa14.26□□□□□ -0.13
NEK9-210ENST00000557026 PHF8Q9UPP1 1060 aa14.26□□□□□ -0.13
NEK9-210ENST00000557026 MSH6P52701 1360 aa14.26□□□□□ -0.13
NEK9-210ENST00000557026 SYCP1Q15431 976 aa14.26□□□□□ -0.13
NEK9-210ENST00000557026 LARP1Q6PKG0 1096 aaKnown RBP14.26□□□□□ -0.13
NEK9-210ENST00000557026 BCL2L13Q9BXK5 485 aa14.26□□□□□ -0.13
NEK9-210ENST00000557026 SULT6B1Q6IMI4 303 aa14.26□□□□□ -0.13
NEK9-210ENST00000557026 DDX54Q8TDD1 881 aaKnown RBP14.26□□□□□ -0.13
NEK9-210ENST00000557026 GNAT3A8MTJ3 354 aa14.25□□□□□ -0.13
NEK9-210ENST00000557026 RAPGEF3O95398 923 aa14.25□□□□□ -0.13
NEK9-210ENST00000557026 NECTIN2Q92692 538 aa14.25□□□□□ -0.13
NEK9-210ENST00000557026 SMARCE1Q969G3 411 aa14.25□□□□□ -0.13
NEK9-210ENST00000557026 MAGEC2Q9UBF1 373 aaPredicted RBP14.25□□□□□ -0.13
NEK9-210ENST00000557026 NUTM2GQ5VZR2 741 aa14.25□□□□□ -0.13
NEK9-210ENST00000557026 RPAP2Q8IXW5 612 aaPredicted RBP14.25□□□□□ -0.13
NEK9-210ENST00000557026 CRBNQ96SW2 442 aa14.25□□□□□ -0.13
NEK9-210ENST00000557026 MBD3O95983 291 aa14.25□□□□□ -0.13
NEK9-210ENST00000557026 IFIT1P09914 478 aaKnown RBP14.25□□□□□ -0.13
NEK9-210ENST00000557026 RABEP1Q15276 862 aa14.25□□□□□ -0.13
NEK9-210ENST00000557026 MPHOSPH6Q99547 160 aaKnown RBP14.25□□□□□ -0.13
NEK9-210ENST00000557026 TIAM1Q13009 1591 aa14.24□□□□□ -0.13
NEK9-210ENST00000557026 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.13
NEK9-210ENST00000557026 SETQ01105 290 aaPredicted RBP14.24□□□□□ -0.13
NEK9-210ENST00000557026 CAVIN4Q5BKX8 364 aa14.24□□□□□ -0.13
NEK9-210ENST00000557026 FAM135AQ9P2D6 1515 aa14.24□□□□□ -0.13
NEK9-210ENST00000557026 LDHCP07864 332 aa14.24□□□□□ -0.13
NEK9-210ENST00000557026 SMARCC1Q92922 1105 aaPredicted RBP14.24□□□□□ -0.13
NEK9-210ENST00000557026 BTBD11A6QL63 1104 aa14.23□□□□□ -0.13
NEK9-210ENST00000557026 PLIN1O60240 522 aa14.23□□□□□ -0.13
NEK9-210ENST00000557026 ZSCAN31Q96LW9 406 aaPredicted RBP14.23□□□□□ -0.13
NEK9-210ENST00000557026 NCOA1Q15788 1441 aa14.23□□□□□ -0.13
NEK9-210ENST00000557026 C11orf95C9JLR9 678 aaPredicted RBP14.23□□□□□ -0.13
NEK9-210ENST00000557026 EXOC5O00471 708 aa14.23□□□□□ -0.13
NEK9-210ENST00000557026 RAB11FIP3O75154 756 aa14.23□□□□□ -0.13
NEK9-210ENST00000557026 RBM19Q9Y4C8 960 aaKnown RBP14.23□□□□□ -0.13
NEK9-210ENST00000557026 MPHOSPH10O00566 681 aaKnown RBP14.23□□□□□ -0.13
NEK9-210ENST00000557026 KRT18P05783 430 aaKnown RBP14.23□□□□□ -0.13
NEK9-210ENST00000557026 PIP4K2BP78356 416 aa14.23□□□□□ -0.13
NEK9-210ENST00000557026 PDE4AP27815 886 aa14.22□□□□□ -0.13
NEK9-210ENST00000557026 LRRCC1Q9C099 1032 aa14.22□□□□□ -0.13
NEK9-210ENST00000557026 VPS37CA5D8V6 355 aaPredicted RBP14.22□□□□□ -0.13
NEK9-210ENST00000557026 CCDC69A6NI79 296 aa14.22□□□□□ -0.13
NEK9-210ENST00000557026 FYB1O15117 783 aa14.22□□□□□ -0.13
NEK9-210ENST00000557026 NFE2L2Q16236 605 aa14.22□□□□□ -0.13
NEK9-210ENST00000557026 ERCC4Q92889 916 aaPredicted RBP14.22□□□□□ -0.13
NEK9-210ENST00000557026 AK7Q96M32 723 aa14.22□□□□□ -0.13
NEK9-210ENST00000557026 SLC26A8Q96RN1 970 aa14.22□□□□□ -0.13
NEK9-210ENST00000557026 TNRQ92752 1358 aa14.21□□□□□ -0.13
NEK9-210ENST00000557026 HSP90AA2PQ14568 343 aaPredicted RBP14.21□□□□□ -0.14
NEK9-210ENST00000557026 PPP1R1BQ9UD71 204 aaPredicted RBP14.21□□□□□ -0.14
NEK9-210ENST00000557026 NGLY1Q96IV0 654 aa14.2□□□□□ -0.14
NEK9-210ENST00000557026 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.2□□□□□ -0.14
NEK9-210ENST00000557026 TTC21AQ8NDW8 1320 aa14.2□□□□□ -0.14
NEK9-210ENST00000557026 DNAJC2Q99543 621 aaKnown RBP14.2□□□□□ -0.14
NEK9-210ENST00000557026 RBM5P52756 815 aaKnown RBP eCLIP14.2□□□□□ -0.14
NEK9-210ENST00000557026 CCDC196A0A1B0GTZ2 297 aa14.2□□□□□ -0.14
NEK9-210ENST00000557026 ARGLU1Q9NWB6 273 aaPredicted RBP14.2□□□□□ -0.14
NEK9-210ENST00000557026 DHX29Q7Z478 1369 aaKnown RBP14.19□□□□□ -0.14
NEK9-210ENST00000557026 KINO60870 393 aaKnown RBP14.19□□□□□ -0.14
NEK9-210ENST00000557026 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 SMC2O95347 1197 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 PPP4R3AQ6IN85 833 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 UBAC1Q9BSL1 405 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 CEP131Q9UPN4 1083 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 CYP46A1Q9Y6A2 500 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 ARAP1Q96P48 1450 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 NPHP3Q7Z494 1330 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 CCDC178Q5BJE1 867 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 SPTY2D1Q68D10 685 aaPredicted RBP14.19□□□□□ -0.14
NEK9-210ENST00000557026 ANKRD18AQ8IVF6 992 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 SDF4Q9BRK5 362 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 FAM13BQ9NYF5 915 aa14.19□□□□□ -0.14
NEK9-210ENST00000557026 PHAXQ9H814 394 aaKnown RBP14.18□□□□□ -0.14
NEK9-210ENST00000557026 HYPKQ9NX55 129 aa14.18□□□□□ -0.14
NEK9-210ENST00000557026 ZNHIT6Q9NWK9 470 aaKnown RBP14.18□□□□□ -0.14
NEK9-210ENST00000557026 RUFY1Q96T51 708 aa14.17□□□□□ -0.14
NEK9-210ENST00000557026 C22orf23Q9BZE7 217 aa14.17□□□□□ -0.14
NEK9-210ENST00000557026 RNF41Q9H4P4 317 aaPredicted RBP14.17□□□□□ -0.14
NEK9-210ENST00000557026 CDC5LQ99459 802 aaKnown RBP14.17□□□□□ -0.14
NEK9-210ENST00000557026 KIF20AO95235 890 aa14.17□□□□□ -0.14
NEK9-210ENST00000557026 POTEJP0CG39 1038 aa14.17□□□□□ -0.14
NEK9-210ENST00000557026 RPGRQ92834 1020 aaKnown RBP14.17□□□□□ -0.14
NEK9-210ENST00000557026 FMNL2Q96PY5 1086 aa14.17□□□□□ -0.14
NEK9-210ENST00000557026 CDCA7Q9BWT1 371 aaPredicted RBP14.17□□□□□ -0.14
NEK9-210ENST00000557026 FANCAO15360 1455 aa14.17□□□□□ -0.14
NEK9-210ENST00000557026 IFT57Q9NWB7 429 aa14.17□□□□□ -0.14
NEK9-210ENST00000557026 TAF7Q15545 349 aaPredicted RBP14.16□□□□□ -0.14
NEK9-210ENST00000557026 ZSCAN29Q8IWY8 852 aaPredicted RBP14.16□□□□□ -0.14
NEK9-210ENST00000557026 GZF1Q9H116 711 aaPredicted RBP14.16□□□□□ -0.14
NEK9-210ENST00000557026 ALDH1L2Q3SY69 923 aa14.16□□□□□ -0.14
NEK9-210ENST00000557026 PPP1R42Q7Z4L9 355 aa14.16□□□□□ -0.14
NEK9-210ENST00000557026 PAF1Q8N7H5 531 aa14.16□□□□□ -0.14
NEK9-210ENST00000557026 EXOC6Q8TAG9 804 aa14.16□□□□□ -0.14
NEK9-210ENST00000557026 PUS7Q96PZ0 661 aaKnown RBP14.16□□□□□ -0.14
NEK9-210ENST00000557026 AMOTL2Q9Y2J4 779 aa14.16□□□□□ -0.14
NEK9-210ENST00000557026 WASLO00401 505 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms