RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 ZBTB7CA1YPR0 619 aa12.23□□□□□ -0.45
PRKCH-222ENST00000556778 ANKRD36BQ8N2N9 1353 aa12.22□□□□□ -0.45
PRKCH-222ENST00000556778 KIAA0232Q92628 1395 aa12.22□□□□□ -0.45
PRKCH-222ENST00000556778 USP19O94966 1318 aa12.22□□□□□ -0.45
PRKCH-222ENST00000556778 FYB1O15117 783 aa12.22□□□□□ -0.45
PRKCH-222ENST00000556778 GGNBP2Q9H3C7 697 aa12.22□□□□□ -0.45
PRKCH-222ENST00000556778 QTRT2Q9H974 415 aaKnown RBP12.22□□□□□ -0.45
PRKCH-222ENST00000556778 TTC21AQ8NDW8 1320 aa12.21□□□□□ -0.45
PRKCH-222ENST00000556778 BTG4Q9NY30 223 aa12.21□□□□□ -0.45
PRKCH-222ENST00000556778 COL22A1Q8NFW1 1626 aaPredicted RBP12.21□□□□□ -0.46
PRKCH-222ENST00000556778 BCL9LQ86UU0 1499 aa12.21□□□□□ -0.46
PRKCH-222ENST00000556778 BRD4O60885 1362 aaPredicted RBP12.2□□□□□ -0.46
PRKCH-222ENST00000556778 ZNF772Q68DY9 489 aaPredicted RBP12.2□□□□□ -0.46
PRKCH-222ENST00000556778 PRDM11Q9NQV5 511 aa12.2□□□□□ -0.46
PRKCH-222ENST00000556778 NINLQ9Y2I6 1382 aa12.19□□□□□ -0.46
PRKCH-222ENST00000556778 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
PRKCH-222ENST00000556778 AXIN2Q9Y2T1 843 aa12.19□□□□□ -0.46
PRKCH-222ENST00000556778 ITSN1Q15811 1721 aa12.19□□□□□ -0.46
PRKCH-222ENST00000556778 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
PRKCH-222ENST00000556778 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
PRKCH-222ENST00000556778 UNC5CLQ8IV45 518 aa12.18□□□□□ -0.46
PRKCH-222ENST00000556778 NSD3Q9BZ95 1437 aa12.18□□□□□ -0.46
PRKCH-222ENST00000556778 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
PRKCH-222ENST00000556778 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
PRKCH-222ENST00000556778 ARHGEF25Q86VW2 580 aa12.17□□□□□ -0.46
PRKCH-222ENST00000556778 STRN4Q9NRL3 753 aa12.17□□□□□ -0.46
PRKCH-222ENST00000556778 SLIT2O94813 1529 aa12.16□□□□□ -0.46
PRKCH-222ENST00000556778 RXRBP28702 533 aa12.16□□□□□ -0.46
PRKCH-222ENST00000556778 ZEB1P37275 1124 aaPredicted RBP12.16□□□□□ -0.46
PRKCH-222ENST00000556778 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
PRKCH-222ENST00000556778 COG3Q96JB2 828 aa12.16□□□□□ -0.46
PRKCH-222ENST00000556778 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.46
PRKCH-222ENST00000556778 LARP1Q6PKG0 1096 aaKnown RBP12.15□□□□□ -0.46
PRKCH-222ENST00000556778 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
PRKCH-222ENST00000556778 KCNH5Q8NCM2 988 aa12.15□□□□□ -0.46
PRKCH-222ENST00000556778 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
PRKCH-222ENST00000556778 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.46
PRKCH-222ENST00000556778 CCDC9Q9Y3X0 531 aaKnown RBP12.15□□□□□ -0.46
PRKCH-222ENST00000556778 PIK3C2AO00443 1686 aa12.15□□□□□ -0.46
PRKCH-222ENST00000556778 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
PRKCH-222ENST00000556778 NUBP1P53384 320 aa12.14□□□□□ -0.47
PRKCH-222ENST00000556778 EVA1CP58658 441 aa12.14□□□□□ -0.47
PRKCH-222ENST00000556778 RRS1Q15050 365 aaKnown RBP12.14□□□□□ -0.47
PRKCH-222ENST00000556778 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
PRKCH-222ENST00000556778 CPDO75976 1380 aa12.14□□□□□ -0.47
PRKCH-222ENST00000556778 NRKQ7Z2Y5 1582 aa12.13□□□□□ -0.47
PRKCH-222ENST00000556778 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
PRKCH-222ENST00000556778 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
PRKCH-222ENST00000556778 SLIT3O75094 1523 aa12.13□□□□□ -0.47
PRKCH-222ENST00000556778 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
PRKCH-222ENST00000556778 VPS72Q15906 364 aa12.13□□□□□ -0.47
PRKCH-222ENST00000556778 USP35Q9P2H5 1018 aa12.13□□□□□ -0.47
PRKCH-222ENST00000556778 ATRNO75882 1429 aa12.12□□□□□ -0.47
PRKCH-222ENST00000556778 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
PRKCH-222ENST00000556778 CAMTA1Q9Y6Y1 1673 aa12.12□□□□□ -0.47
PRKCH-222ENST00000556778 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
PRKCH-222ENST00000556778 AKAP12Q02952 1782 aa12.11□□□□□ -0.47
PRKCH-222ENST00000556778 MYOM1P52179 1685 aa12.11□□□□□ -0.47
PRKCH-222ENST00000556778 AATKQ6ZMQ8 1374 aa12.11□□□□□ -0.47
PRKCH-222ENST00000556778 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
PRKCH-222ENST00000556778 MON2Q7Z3U7 1717 aa12.11□□□□□ -0.47
PRKCH-222ENST00000556778 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
PRKCH-222ENST00000556778 FAM98CQ17RN3 349 aaKnown RBP12.1□□□□□ -0.47
PRKCH-222ENST00000556778 CC2D1BQ5T0F9 858 aaKnown RBP12.1□□□□□ -0.47
PRKCH-222ENST00000556778 LTV1Q96GA3 475 aaPredicted RBP12.1□□□□□ -0.47
PRKCH-222ENST00000556778 KNSTRNQ9Y448 316 aa12.1□□□□□ -0.47
PRKCH-222ENST00000556778 EMILIN1Q9Y6C2 1016 aa12.1□□□□□ -0.47
PRKCH-222ENST00000556778 CRYBG1Q9Y4K1 1723 aa12.1□□□□□ -0.47
PRKCH-222ENST00000556778 NFAT5O94916 1531 aa12.1□□□□□ -0.47
PRKCH-222ENST00000556778 SPATA31A5Q5VU36 1347 aa12.1□□□□□ -0.47
PRKCH-222ENST00000556778 SPATA31A7Q8IWB4 1347 aa12.1□□□□□ -0.47
PRKCH-222ENST00000556778 ABCA3Q99758 1704 aa12.09□□□□□ -0.47
PRKCH-222ENST00000556778 PHRF1Q9P1Y6 1649 aaKnown RBP12.09□□□□□ -0.47
PRKCH-222ENST00000556778 SPATA31A1Q5TZJ5 1347 aa12.09□□□□□ -0.47
PRKCH-222ENST00000556778 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
PRKCH-222ENST00000556778 HOXC9P31274 260 aa12.08□□□□□ -0.48
PRKCH-222ENST00000556778 DDX10Q13206 875 aaKnown RBP12.08□□□□□ -0.48
PRKCH-222ENST00000556778 HSP90AB2PQ58FF8 381 aa12.08□□□□□ -0.48
PRKCH-222ENST00000556778 SEPT12Q8IYM1 358 aa12.08□□□□□ -0.48
PRKCH-222ENST00000556778 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
PRKCH-222ENST00000556778 IP6K1Q92551 441 aa12.08□□□□□ -0.48
PRKCH-222ENST00000556778 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
PRKCH-222ENST00000556778 RGS12O14924 1447 aa12.07□□□□□ -0.48
PRKCH-222ENST00000556778 ONECUT3O60422 494 aaPredicted RBP12.07□□□□□ -0.48
PRKCH-222ENST00000556778 CSB-PGBD3P0DP91 1061 aa12.07□□□□□ -0.48
PRKCH-222ENST00000556778 AMPHP49418 695 aa12.07□□□□□ -0.48
PRKCH-222ENST00000556778 TOM1L2Q6ZVM7 507 aa12.07□□□□□ -0.48
PRKCH-222ENST00000556778 MORC1Q86VD1 984 aa12.07□□□□□ -0.48
PRKCH-222ENST00000556778 ANKRD24Q8TF21 1146 aa12.07□□□□□ -0.48
PRKCH-222ENST00000556778 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
PRKCH-222ENST00000556778 MARF1Q9Y4F3 1742 aaKnown RBP12.07□□□□□ -0.48
PRKCH-222ENST00000556778 COL5A2P05997 1499 aaPredicted RBP12.07□□□□□ -0.48
PRKCH-222ENST00000556778 FAM182BQ5T319 152 aa12.06□□□□□ -0.48
PRKCH-222ENST00000556778 PHF12Q96QT6 1004 aa12.06□□□□□ -0.48
PRKCH-222ENST00000556778 A0A0G2JS52 829 aa12.05□□□□□ -0.48
PRKCH-222ENST00000556778 MYT1Q01538 1121 aa12.05□□□□□ -0.48
PRKCH-222ENST00000556778 NLRP2Q9NX02 1062 aa12.05□□□□□ -0.48
PRKCH-222ENST00000556778 WDR17Q8IZU2 1322 aa12.05□□□□□ -0.48
PRKCH-222ENST00000556778 COL14A1Q05707 1796 aaKnown RBP12.05□□□□□ -0.48
PRKCH-222ENST00000556778 GLI3P10071 1580 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms