RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	ZBTB7C	A1YPR0	619 aa		12.23	□□□□□ -0.45
PRKCH-222	ENST00000556778	ANKRD36B	Q8N2N9	1353 aa		12.22	□□□□□ -0.45
PRKCH-222	ENST00000556778	KIAA0232	Q92628	1395 aa		12.22	□□□□□ -0.45
PRKCH-222	ENST00000556778	USP19	O94966	1318 aa		12.22	□□□□□ -0.45
PRKCH-222	ENST00000556778	FYB1	O15117	783 aa		12.22	□□□□□ -0.45
PRKCH-222	ENST00000556778	GGNBP2	Q9H3C7	697 aa		12.22	□□□□□ -0.45
PRKCH-222	ENST00000556778	QTRT2	Q9H974	415 aa	Known RBP	12.22	□□□□□ -0.45
PRKCH-222	ENST00000556778	TTC21A	Q8NDW8	1320 aa		12.21	□□□□□ -0.45
PRKCH-222	ENST00000556778	BTG4	Q9NY30	223 aa		12.21	□□□□□ -0.45
PRKCH-222	ENST00000556778	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.21	□□□□□ -0.46
PRKCH-222	ENST00000556778	BCL9L	Q86UU0	1499 aa		12.21	□□□□□ -0.46
PRKCH-222	ENST00000556778	BRD4	O60885	1362 aa	Predicted RBP	12.2	□□□□□ -0.46
PRKCH-222	ENST00000556778	ZNF772	Q68DY9	489 aa	Predicted RBP	12.2	□□□□□ -0.46
PRKCH-222	ENST00000556778	PRDM11	Q9NQV5	511 aa		12.2	□□□□□ -0.46
PRKCH-222	ENST00000556778	NINL	Q9Y2I6	1382 aa		12.19	□□□□□ -0.46
PRKCH-222	ENST00000556778	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.19	□□□□□ -0.46
PRKCH-222	ENST00000556778	AXIN2	Q9Y2T1	843 aa		12.19	□□□□□ -0.46
PRKCH-222	ENST00000556778	ITSN1	Q15811	1721 aa		12.19	□□□□□ -0.46
PRKCH-222	ENST00000556778	ALS2	Q96Q42	1657 aa		12.19	□□□□□ -0.46
PRKCH-222	ENST00000556778	EDC4	Q6P2E9	1401 aa	Known RBP	12.19	□□□□□ -0.46
PRKCH-222	ENST00000556778	UNC5CL	Q8IV45	518 aa		12.18	□□□□□ -0.46
PRKCH-222	ENST00000556778	NSD3	Q9BZ95	1437 aa		12.18	□□□□□ -0.46
PRKCH-222	ENST00000556778	USP31	Q70CQ4	1352 aa		12.18	□□□□□ -0.46
PRKCH-222	ENST00000556778	CCDC7	Q96M83	1385 aa		12.18	□□□□□ -0.46
PRKCH-222	ENST00000556778	ARHGEF25	Q86VW2	580 aa		12.17	□□□□□ -0.46
PRKCH-222	ENST00000556778	STRN4	Q9NRL3	753 aa		12.17	□□□□□ -0.46
PRKCH-222	ENST00000556778	SLIT2	O94813	1529 aa		12.16	□□□□□ -0.46
PRKCH-222	ENST00000556778	RXRB	P28702	533 aa		12.16	□□□□□ -0.46
PRKCH-222	ENST00000556778	ZEB1	P37275	1124 aa	Predicted RBP	12.16	□□□□□ -0.46
PRKCH-222	ENST00000556778	CNGB1	Q14028	1251 aa	Predicted RBP	12.16	□□□□□ -0.46
PRKCH-222	ENST00000556778	COG3	Q96JB2	828 aa		12.16	□□□□□ -0.46
PRKCH-222	ENST00000556778	PER1	O15534	1290 aa	Predicted RBP	12.15	□□□□□ -0.46
PRKCH-222	ENST00000556778	LARP1	Q6PKG0	1096 aa	Known RBP	12.15	□□□□□ -0.46
PRKCH-222	ENST00000556778	RASEF	Q8IZ41	740 aa		12.15	□□□□□ -0.46
PRKCH-222	ENST00000556778	KCNH5	Q8NCM2	988 aa		12.15	□□□□□ -0.46
PRKCH-222	ENST00000556778	GJD4	Q96KN9	370 aa	Predicted RBP	12.15	□□□□□ -0.46
PRKCH-222	ENST00000556778	TRPC5	Q9UL62	973 aa	Predicted RBP	12.15	□□□□□ -0.46
PRKCH-222	ENST00000556778	CCDC9	Q9Y3X0	531 aa	Known RBP	12.15	□□□□□ -0.46
PRKCH-222	ENST00000556778	PIK3C2A	O00443	1686 aa		12.15	□□□□□ -0.46
PRKCH-222	ENST00000556778	TNNT2	P45379	298 aa	Predicted RBP	12.14	□□□□□ -0.47
PRKCH-222	ENST00000556778	NUBP1	P53384	320 aa		12.14	□□□□□ -0.47
PRKCH-222	ENST00000556778	EVA1C	P58658	441 aa		12.14	□□□□□ -0.47
PRKCH-222	ENST00000556778	RRS1	Q15050	365 aa	Known RBP	12.14	□□□□□ -0.47
PRKCH-222	ENST00000556778	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.14	□□□□□ -0.47
PRKCH-222	ENST00000556778	CPD	O75976	1380 aa		12.14	□□□□□ -0.47
PRKCH-222	ENST00000556778	NRK	Q7Z2Y5	1582 aa		12.13	□□□□□ -0.47
PRKCH-222	ENST00000556778	OVOS2	A0A0J9YW53	1432 aa		12.13	□□□□□ -0.47
PRKCH-222	ENST00000556778	OVOS2	Q6IE36	1432 aa		12.13	□□□□□ -0.47
PRKCH-222	ENST00000556778	SLIT3	O75094	1523 aa		12.13	□□□□□ -0.47
PRKCH-222	ENST00000556778	RBM6	P78332	1123 aa	Known RBP	12.13	□□□□□ -0.47
PRKCH-222	ENST00000556778	VPS72	Q15906	364 aa		12.13	□□□□□ -0.47
PRKCH-222	ENST00000556778	USP35	Q9P2H5	1018 aa		12.13	□□□□□ -0.47
PRKCH-222	ENST00000556778	ATRN	O75882	1429 aa		12.12	□□□□□ -0.47
PRKCH-222	ENST00000556778	ZNF579	Q8NAF0	562 aa	Known RBP	12.12	□□□□□ -0.47
PRKCH-222	ENST00000556778	CAMTA1	Q9Y6Y1	1673 aa		12.12	□□□□□ -0.47
PRKCH-222	ENST00000556778	MAP3K19	Q56UN5	1328 aa		12.11	□□□□□ -0.47
PRKCH-222	ENST00000556778	AKAP12	Q02952	1782 aa		12.11	□□□□□ -0.47
PRKCH-222	ENST00000556778	MYOM1	P52179	1685 aa		12.11	□□□□□ -0.47
PRKCH-222	ENST00000556778	AATK	Q6ZMQ8	1374 aa		12.11	□□□□□ -0.47
PRKCH-222	ENST00000556778	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.11	□□□□□ -0.47
PRKCH-222	ENST00000556778	MON2	Q7Z3U7	1717 aa		12.11	□□□□□ -0.47
PRKCH-222	ENST00000556778	CGNL1	Q0VF96	1302 aa		12.11	□□□□□ -0.47
PRKCH-222	ENST00000556778	FAM98C	Q17RN3	349 aa	Known RBP	12.1	□□□□□ -0.47
PRKCH-222	ENST00000556778	CC2D1B	Q5T0F9	858 aa	Known RBP	12.1	□□□□□ -0.47
PRKCH-222	ENST00000556778	LTV1	Q96GA3	475 aa	Predicted RBP	12.1	□□□□□ -0.47
PRKCH-222	ENST00000556778	KNSTRN	Q9Y448	316 aa		12.1	□□□□□ -0.47
PRKCH-222	ENST00000556778	EMILIN1	Q9Y6C2	1016 aa		12.1	□□□□□ -0.47
PRKCH-222	ENST00000556778	CRYBG1	Q9Y4K1	1723 aa		12.1	□□□□□ -0.47
PRKCH-222	ENST00000556778	NFAT5	O94916	1531 aa		12.1	□□□□□ -0.47
PRKCH-222	ENST00000556778	SPATA31A5	Q5VU36	1347 aa		12.1	□□□□□ -0.47
PRKCH-222	ENST00000556778	SPATA31A7	Q8IWB4	1347 aa		12.1	□□□□□ -0.47
PRKCH-222	ENST00000556778	ABCA3	Q99758	1704 aa		12.09	□□□□□ -0.47
PRKCH-222	ENST00000556778	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.09	□□□□□ -0.47
PRKCH-222	ENST00000556778	SPATA31A1	Q5TZJ5	1347 aa		12.09	□□□□□ -0.47
PRKCH-222	ENST00000556778	PPM1G	O15355	546 aa	Predicted RBP	12.08	□□□□□ -0.48
PRKCH-222	ENST00000556778	HOXC9	P31274	260 aa		12.08	□□□□□ -0.48
PRKCH-222	ENST00000556778	DDX10	Q13206	875 aa	Known RBP	12.08	□□□□□ -0.48
PRKCH-222	ENST00000556778	HSP90AB2P	Q58FF8	381 aa		12.08	□□□□□ -0.48
PRKCH-222	ENST00000556778	SEPT12	Q8IYM1	358 aa		12.08	□□□□□ -0.48
PRKCH-222	ENST00000556778	KLHL34	Q8N239	644 aa		12.08	□□□□□ -0.48
PRKCH-222	ENST00000556778	IP6K1	Q92551	441 aa		12.08	□□□□□ -0.48
PRKCH-222	ENST00000556778	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.08	□□□□□ -0.48
PRKCH-222	ENST00000556778	RGS12	O14924	1447 aa		12.07	□□□□□ -0.48
PRKCH-222	ENST00000556778	ONECUT3	O60422	494 aa	Predicted RBP	12.07	□□□□□ -0.48
PRKCH-222	ENST00000556778	CSB-PGBD3	P0DP91	1061 aa		12.07	□□□□□ -0.48
PRKCH-222	ENST00000556778	AMPH	P49418	695 aa		12.07	□□□□□ -0.48
PRKCH-222	ENST00000556778	TOM1L2	Q6ZVM7	507 aa		12.07	□□□□□ -0.48
PRKCH-222	ENST00000556778	MORC1	Q86VD1	984 aa		12.07	□□□□□ -0.48
PRKCH-222	ENST00000556778	ANKRD24	Q8TF21	1146 aa		12.07	□□□□□ -0.48
PRKCH-222	ENST00000556778	POLK	Q9UBT6	870 aa		12.07	□□□□□ -0.48
PRKCH-222	ENST00000556778	MARF1	Q9Y4F3	1742 aa	Known RBP	12.07	□□□□□ -0.48
PRKCH-222	ENST00000556778	COL5A2	P05997	1499 aa	Predicted RBP	12.07	□□□□□ -0.48
PRKCH-222	ENST00000556778	FAM182B	Q5T319	152 aa		12.06	□□□□□ -0.48
PRKCH-222	ENST00000556778	PHF12	Q96QT6	1004 aa		12.06	□□□□□ -0.48
PRKCH-222	ENST00000556778		A0A0G2JS52	829 aa		12.05	□□□□□ -0.48
PRKCH-222	ENST00000556778	MYT1	Q01538	1121 aa		12.05	□□□□□ -0.48
PRKCH-222	ENST00000556778	NLRP2	Q9NX02	1062 aa		12.05	□□□□□ -0.48
PRKCH-222	ENST00000556778	WDR17	Q8IZU2	1322 aa		12.05	□□□□□ -0.48
PRKCH-222	ENST00000556778	COL14A1	Q05707	1796 aa	Known RBP	12.05	□□□□□ -0.48
PRKCH-222	ENST00000556778	GLI3	P10071	1580 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms