RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 UNC5CLQ8IV45 518 aa11.04□□□□□ -0.64
HNRNPC-226ENST00000556628 KLHL34Q8N239 644 aa11.04□□□□□ -0.64
HNRNPC-226ENST00000556628 CABLES1Q8TDN4 633 aa11.04□□□□□ -0.64
HNRNPC-226ENST00000556628 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
HNRNPC-226ENST00000556628 CDK19Q9BWU1 502 aa11.04□□□□□ -0.64
HNRNPC-226ENST00000556628 BCL9LQ86UU0 1499 aa11.04□□□□□ -0.64
HNRNPC-226ENST00000556628 TRPM3Q9HCF6 1732 aaPredicted RBP11.04□□□□□ -0.64
HNRNPC-226ENST00000556628 NBPF1Q3BBV0 1214 aa11.03□□□□□ -0.64
HNRNPC-226ENST00000556628 L3MBTL2Q969R5 705 aa11.03□□□□□ -0.64
HNRNPC-226ENST00000556628 GJD4Q96KN9 370 aaPredicted RBP11.03□□□□□ -0.64
HNRNPC-226ENST00000556628 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
HNRNPC-226ENST00000556628 PLCH1Q4KWH8 1693 aa11.03□□□□□ -0.64
HNRNPC-226ENST00000556628 ALS2Q96Q42 1657 aa11.03□□□□□ -0.64
HNRNPC-226ENST00000556628 NWD2Q9ULI1 1742 aa11.03□□□□□ -0.64
HNRNPC-226ENST00000556628 SLIT2O94813 1529 aa11.03□□□□□ -0.64
HNRNPC-226ENST00000556628 ATAD2Q6PL18 1390 aa11.03□□□□□ -0.64
HNRNPC-226ENST00000556628 ATP7BP35670 1465 aa11.02□□□□□ -0.65
HNRNPC-226ENST00000556628 SIN3AQ96ST3 1273 aa11.02□□□□□ -0.65
HNRNPC-226ENST00000556628 PCDHB8Q9UN66 801 aa11.02□□□□□ -0.65
HNRNPC-226ENST00000556628 CCDC9Q9Y3X0 531 aaKnown RBP11.02□□□□□ -0.65
HNRNPC-226ENST00000556628 CENPJQ9HC77 1338 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-226ENST00000556628 QRICH2Q9H0J4 1663 aa11.01□□□□□ -0.65
HNRNPC-226ENST00000556628 SRPK2P78362 688 aaKnown RBP11.01□□□□□ -0.65
HNRNPC-226ENST00000556628 TRPM1Q7Z4N2 1603 aa11.01□□□□□ -0.65
HNRNPC-226ENST00000556628 TOPAZ1Q8N9V7 1692 aa11.01□□□□□ -0.65
HNRNPC-226ENST00000556628 GSE1Q14687 1217 aa11□□□□□ -0.65
HNRNPC-226ENST00000556628 COL14A1Q05707 1796 aaKnown RBP11□□□□□ -0.65
HNRNPC-226ENST00000556628 RALGAPBQ86X10 1494 aa11□□□□□ -0.65
HNRNPC-226ENST00000556628 VPS72Q15906 364 aa10.99□□□□□ -0.65
HNRNPC-226ENST00000556628 ACEP12821 1306 aa10.99□□□□□ -0.65
HNRNPC-226ENST00000556628 GLI3P10071 1580 aa10.99□□□□□ -0.65
HNRNPC-226ENST00000556628 FAM83GA6ND36 823 aa10.98□□□□□ -0.65
HNRNPC-226ENST00000556628 NBPF8Q3BBV2 869 aa10.98□□□□□ -0.65
HNRNPC-226ENST00000556628 SPOCK2Q92563 424 aa10.98□□□□□ -0.65
HNRNPC-226ENST00000556628 ROCK2O75116 1388 aaKnown RBP10.98□□□□□ -0.65
HNRNPC-226ENST00000556628 A0A0G2JS52 829 aa10.97□□□□□ -0.65
HNRNPC-226ENST00000556628 PLEKHG3A1L390 1219 aa10.97□□□□□ -0.65
HNRNPC-226ENST00000556628 MYT1Q01538 1121 aa10.97□□□□□ -0.65
HNRNPC-226ENST00000556628 ZNF467Q7Z7K2 595 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-226ENST00000556628 BTG4Q9NY30 223 aa10.97□□□□□ -0.65
HNRNPC-226ENST00000556628 POLR3AO14802 1390 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-226ENST00000556628 PHRF1Q9P1Y6 1649 aaKnown RBP10.97□□□□□ -0.65
HNRNPC-226ENST00000556628 CRYBG1Q9Y4K1 1723 aa10.97□□□□□ -0.65
HNRNPC-226ENST00000556628 PPIP5K1Q6PFW1 1433 aa10.96□□□□□ -0.65
HNRNPC-226ENST00000556628 EVC2Q86UK5 1308 aa10.96□□□□□ -0.65
HNRNPC-226ENST00000556628 TRIM26Q12899 539 aaPredicted RBP10.96□□□□□ -0.65
HNRNPC-226ENST00000556628 CCDC125Q86Z20 511 aa10.96□□□□□ -0.65
HNRNPC-226ENST00000556628 CDAN1Q8IWY9 1227 aa10.96□□□□□ -0.65
HNRNPC-226ENST00000556628 CABP2Q9NPB3 220 aa10.96□□□□□ -0.65
HNRNPC-226ENST00000556628 PRDM11Q9NQV5 511 aa10.96□□□□□ -0.65
HNRNPC-226ENST00000556628 BRWD3Q6RI45 1802 aa10.95□□□□□ -0.66
HNRNPC-226ENST00000556628 NRAPQ86VF7 1730 aa10.95□□□□□ -0.66
HNRNPC-226ENST00000556628 TONSLQ96HA7 1378 aa10.95□□□□□ -0.66
HNRNPC-226ENST00000556628 ST18O60284 1047 aa10.95□□□□□ -0.66
HNRNPC-226ENST00000556628 NUTM2GQ5VZR2 741 aa10.95□□□□□ -0.66
HNRNPC-226ENST00000556628 SEPT12Q8IYM1 358 aa10.95□□□□□ -0.66
HNRNPC-226ENST00000556628 ABTB2Q8N961 1025 aa10.95□□□□□ -0.66
HNRNPC-226ENST00000556628 BRD4O60885 1362 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-226ENST00000556628 ZC3H6P61129 1189 aaKnown RBP10.94□□□□□ -0.66
HNRNPC-226ENST00000556628 NLRP13Q86W25 1043 aa10.94□□□□□ -0.66
HNRNPC-226ENST00000556628 SF3B2Q13435 895 aaKnown RBP10.93□□□□□ -0.66
HNRNPC-226ENST00000556628 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.93□□□□□ -0.66
HNRNPC-226ENST00000556628 CABP1Q9NZU7 370 aa10.93□□□□□ -0.66
HNRNPC-226ENST00000556628 KIAA0232Q92628 1395 aa10.92□□□□□ -0.66
HNRNPC-226ENST00000556628 ONECUT3O60422 494 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-226ENST00000556628 CHRM1P11229 460 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-226ENST00000556628 GOLGA2Q08379 1002 aa10.92□□□□□ -0.66
HNRNPC-226ENST00000556628 CHRNA2Q15822 529 aa10.92□□□□□ -0.66
HNRNPC-226ENST00000556628 FAM98CQ17RN3 349 aaKnown RBP10.92□□□□□ -0.66
HNRNPC-226ENST00000556628 KRT27Q7Z3Y8 459 aa10.92□□□□□ -0.66
HNRNPC-226ENST00000556628 CARD11Q9BXL7 1154 aa10.92□□□□□ -0.66
HNRNPC-226ENST00000556628 EVA1CP58658 441 aa10.91□□□□□ -0.66
HNRNPC-226ENST00000556628 STRN4Q9NRL3 753 aa10.91□□□□□ -0.66
HNRNPC-226ENST00000556628 USP6P35125 1406 aa10.91□□□□□ -0.66
HNRNPC-226ENST00000556628 NRKQ7Z2Y5 1582 aa10.9□□□□□ -0.66
HNRNPC-226ENST00000556628 SPATA31A5Q5VU36 1347 aa10.9□□□□□ -0.66
HNRNPC-226ENST00000556628 SPATA31A7Q8IWB4 1347 aa10.9□□□□□ -0.66
HNRNPC-226ENST00000556628 SNPHO15079 494 aa10.9□□□□□ -0.66
HNRNPC-226ENST00000556628 MKRN3Q13064 507 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-226ENST00000556628 BLMP54132 1417 aaPredicted RBP10.9□□□□□ -0.66
HNRNPC-226ENST00000556628 USP19O94966 1318 aa10.89□□□□□ -0.67
HNRNPC-226ENST00000556628 ZBTB7CA1YPR0 619 aa10.89□□□□□ -0.67
HNRNPC-226ENST00000556628 GCP02774 474 aa10.89□□□□□ -0.67
HNRNPC-226ENST00000556628 NLRP6P59044 892 aa10.89□□□□□ -0.67
HNRNPC-226ENST00000556628 AKAP12Q02952 1782 aa10.88□□□□□ -0.67
HNRNPC-226ENST00000556628 CPDO75976 1380 aa10.88□□□□□ -0.67
HNRNPC-226ENST00000556628 SPATA31A1Q5TZJ5 1347 aa10.87□□□□□ -0.67
HNRNPC-226ENST00000556628 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
HNRNPC-226ENST00000556628 TMEM121BQ9BXQ6 578 aaPredicted RBP10.87□□□□□ -0.67
HNRNPC-226ENST00000556628 USP35Q9P2H5 1018 aa10.87□□□□□ -0.67
HNRNPC-226ENST00000556628 SBNO2Q9Y2G9 1366 aa10.87□□□□□ -0.67
HNRNPC-226ENST00000556628 SSH2Q76I76 1423 aa10.86□□□□□ -0.67
HNRNPC-226ENST00000556628 SLC24A1O60721 1099 aa10.86□□□□□ -0.67
HNRNPC-226ENST00000556628 KTN1Q86UP2 1357 aaKnown RBP10.86□□□□□ -0.67
HNRNPC-226ENST00000556628 PIK3C2AO00443 1686 aa10.85□□□□□ -0.67
HNRNPC-226ENST00000556628 LMO7Q8WWI1 1683 aa10.85□□□□□ -0.67
HNRNPC-226ENST00000556628 THSD7AQ9UPZ6 1657 aa10.85□□□□□ -0.67
HNRNPC-226ENST00000556628 CAMTA1Q9Y6Y1 1673 aa10.85□□□□□ -0.67
HNRNPC-226ENST00000556628 TTC21BQ7Z4L5 1316 aa10.85□□□□□ -0.67
HNRNPC-226ENST00000556628 TTC21AQ8NDW8 1320 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms