RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 RRBP1Q9P2E9 1410 aaKnown RBP12.78□□□□□ -0.36
SPTB-208ENST00000556626 CASQ1P31415 396 aa12.78□□□□□ -0.36
SPTB-208ENST00000556626 MAP3K11Q16584 847 aa12.78□□□□□ -0.36
SPTB-208ENST00000556626 DYNC1I1O14576 645 aa12.78□□□□□ -0.36
SPTB-208ENST00000556626 ZSCAN12O43309 604 aa12.78□□□□□ -0.36
SPTB-208ENST00000556626 GNAI3P08754 354 aa12.78□□□□□ -0.36
SPTB-208ENST00000556626 CCDC91Q7Z6B0 441 aa12.78□□□□□ -0.36
SPTB-208ENST00000556626 SFPQP23246 707 aaKnown RBP eCLIP12.77□□□□□ -0.36
SPTB-208ENST00000556626 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.36
SPTB-208ENST00000556626 ZNF397Q8NF99 534 aaPredicted RBP12.77□□□□□ -0.36
SPTB-208ENST00000556626 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.36
SPTB-208ENST00000556626 LARP1BQ659C4 914 aaKnown RBP12.77□□□□□ -0.36
SPTB-208ENST00000556626 KRI1Q8N9T8 703 aaKnown RBP12.77□□□□□ -0.36
SPTB-208ENST00000556626 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.77□□□□□ -0.36
SPTB-208ENST00000556626 LUZP1Q86V48 1076 aa12.77□□□□□ -0.37
SPTB-208ENST00000556626 PDZRN3Q9UPQ7 1066 aa12.77□□□□□ -0.37
SPTB-208ENST00000556626 DHX37Q8IY37 1157 aaKnown RBP12.77□□□□□ -0.37
SPTB-208ENST00000556626 WDR97A6NE52 1622 aa12.77□□□□□ -0.37
SPTB-208ENST00000556626 TBC1D2BQ9UPU7 963 aa12.77□□□□□ -0.37
SPTB-208ENST00000556626 TRIM22Q8IYM9 498 aa12.76□□□□□ -0.37
SPTB-208ENST00000556626 MPNDQ8N594 471 aa12.76□□□□□ -0.37
SPTB-208ENST00000556626 GPATCH11Q8N954 259 aa12.76□□□□□ -0.37
SPTB-208ENST00000556626 NUTM2FA1L443 756 aa12.76□□□□□ -0.37
SPTB-208ENST00000556626 KRT18P05783 430 aaKnown RBP12.76□□□□□ -0.37
SPTB-208ENST00000556626 FILIP1Q7Z7B0 1213 aa12.76□□□□□ -0.37
SPTB-208ENST00000556626 IMMTQ16891 758 aaKnown RBP12.76□□□□□ -0.37
SPTB-208ENST00000556626 MYOM3Q5VTT5 1437 aa12.75□□□□□ -0.37
SPTB-208ENST00000556626 KIF5CO60282 957 aa12.75□□□□□ -0.37
SPTB-208ENST00000556626 CDKL5O76039 1030 aa12.75□□□□□ -0.37
SPTB-208ENST00000556626 RIC3Q7Z5B4 369 aa12.75□□□□□ -0.37
SPTB-208ENST00000556626 SRCIN1Q9C0H9 1055 aa12.75□□□□□ -0.37
SPTB-208ENST00000556626 GNAI2P04899 355 aa12.75□□□□□ -0.37
SPTB-208ENST00000556626 WASHC2AQ641Q2 1341 aa12.75□□□□□ -0.37
SPTB-208ENST00000556626 PLEKHH1Q9ULM0 1364 aa12.75□□□□□ -0.37
SPTB-208ENST00000556626 JAKMIP3Q5VZ66 844 aa12.75□□□□□ -0.37
SPTB-208ENST00000556626 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
SPTB-208ENST00000556626 MCM5P33992 734 aa12.75□□□□□ -0.37
SPTB-208ENST00000556626 PPP4R3BQ5MIZ7 849 aa12.74□□□□□ -0.37
SPTB-208ENST00000556626 CCDC183Q5T5S1 534 aa12.74□□□□□ -0.37
SPTB-208ENST00000556626 CCDC30Q5VVM6 783 aa12.74□□□□□ -0.37
SPTB-208ENST00000556626 FGD6Q6ZV73 1430 aa12.74□□□□□ -0.37
SPTB-208ENST00000556626 NF2P35240 595 aa12.74□□□□□ -0.37
SPTB-208ENST00000556626 CFAP100Q494V2 611 aa12.73□□□□□ -0.37
SPTB-208ENST00000556626 TANGO6Q9C0B7 1094 aa12.73□□□□□ -0.37
SPTB-208ENST00000556626 TICAM2Q86XR7 235 aa12.73□□□□□ -0.37
SPTB-208ENST00000556626 FYB1O15117 783 aa12.73□□□□□ -0.37
SPTB-208ENST00000556626 DNAJC2Q99543 621 aaKnown RBP12.73□□□□□ -0.37
SPTB-208ENST00000556626 HMOX1P09601 288 aa12.73□□□□□ -0.37
SPTB-208ENST00000556626 ADAMTS8Q9UP79 889 aa12.73□□□□□ -0.37
SPTB-208ENST00000556626 POLA1P09884 1462 aaPredicted RBP12.73□□□□□ -0.37
SPTB-208ENST00000556626 PDS5BQ9NTI5 1447 aa12.73□□□□□ -0.37
SPTB-208ENST00000556626 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.73□□□□□ -0.371e-6■■■■■ 27
SPTB-208ENST00000556626 EVA1CP58658 441 aa12.72□□□□□ -0.37
SPTB-208ENST00000556626 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
SPTB-208ENST00000556626 ATP2B1P20020 1258 aa12.72□□□□□ -0.37
SPTB-208ENST00000556626 ZHX1Q9UKY1 873 aaPredicted RBP12.72□□□□□ -0.37
SPTB-208ENST00000556626 SURF6O75683 361 aaKnown RBP12.72□□□□□ -0.37
SPTB-208ENST00000556626 POTEB2H3BUK9 544 aa12.72□□□□□ -0.37
SPTB-208ENST00000556626 CHD1LQ86WJ1 897 aa12.72□□□□□ -0.37
SPTB-208ENST00000556626 FYCO1Q9BQS8 1478 aa12.72□□□□□ -0.37
SPTB-208ENST00000556626 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
SPTB-208ENST00000556626 SPATA24Q86W54 205 aa12.71□□□□□ -0.37
SPTB-208ENST00000556626 WWC2Q6AWC2 1192 aa12.71□□□□□ -0.37
SPTB-208ENST00000556626 LRRC9Q6ZRR7 1453 aa12.71□□□□□ -0.37
SPTB-208ENST00000556626 ERICH3Q5RHP9 1530 aa12.71□□□□□ -0.37
SPTB-208ENST00000556626 STK3Q13188 491 aa12.71□□□□□ -0.38
SPTB-208ENST00000556626 TAF4BQ92750 862 aa12.71□□□□□ -0.38
SPTB-208ENST00000556626 PPP6R1Q9UPN7 881 aa12.71□□□□□ -0.38
SPTB-208ENST00000556626 C16orf45Q96MC5 204 aaPredicted RBP12.7□□□□□ -0.38
SPTB-208ENST00000556626 MSH5O43196 834 aa12.7□□□□□ -0.38
SPTB-208ENST00000556626 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
SPTB-208ENST00000556626 MYZAPP0CAP1 466 aa12.7□□□□□ -0.38
SPTB-208ENST00000556626 IPO4Q8TEX9 1081 aaKnown RBP12.7□□□□□ -0.38
SPTB-208ENST00000556626 NEMFO60524 1076 aa12.7□□□□□ -0.38
SPTB-208ENST00000556626 C1orf115Q9H7X2 142 aa12.7□□□□□ -0.38
SPTB-208ENST00000556626 CLIP2Q9UDT6 1046 aa12.7□□□□□ -0.38
SPTB-208ENST00000556626 KDM4AO75164 1064 aa12.7□□□□□ -0.38
SPTB-208ENST00000556626 IKQ13123 557 aaPredicted RBP12.7□□□□□ -0.38
SPTB-208ENST00000556626 CCT4P50991 539 aaKnown RBP12.7□□□□□ -0.38
SPTB-208ENST00000556626 DESP17661 470 aa12.7□□□□□ -0.38
SPTB-208ENST00000556626 POLR3GO15318 223 aaPredicted RBP12.69□□□□□ -0.38
SPTB-208ENST00000556626 PAXBP1Q9Y5B6 917 aa12.69□□□□□ -0.38
SPTB-208ENST00000556626 CCDC69A6NI79 296 aa12.69□□□□□ -0.38
SPTB-208ENST00000556626 EIF5P55010 431 aaKnown RBP12.69□□□□□ -0.38
SPTB-208ENST00000556626 SPA17Q15506 151 aa12.69□□□□□ -0.38
SPTB-208ENST00000556626 PRIMPOLQ96LW4 560 aa12.69□□□□□ -0.38
SPTB-208ENST00000556626 MVPQ14764 893 aaKnown RBP12.69□□□□□ -0.38
SPTB-208ENST00000556626 CEP63Q96MT8 703 aa12.69□□□□□ -0.38
SPTB-208ENST00000556626 SETD1BQ9UPS6 1966 aaKnown RBP12.69□□□□□ -0.38
SPTB-208ENST00000556626 CTR9Q6PD62 1173 aa12.69□□□□□ -0.38
SPTB-208ENST00000556626 ZSCAN31Q96LW9 406 aaPredicted RBP12.69□□□□□ -0.38
SPTB-208ENST00000556626 TMEM132AQ24JP5 1023 aa12.69□□□□□ -0.38
SPTB-208ENST00000556626 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
SPTB-208ENST00000556626 STAC3Q96MF2 364 aa12.69□□□□□ -0.38
SPTB-208ENST00000556626 XPCQ01831 940 aaPredicted RBP12.68□□□□□ -0.38
SPTB-208ENST00000556626 IFFO1Q0D2I5 559 aa12.68□□□□□ -0.38
SPTB-208ENST00000556626 CAMK4Q16566 473 aa12.68□□□□□ -0.38
SPTB-208ENST00000556626 SEPT11Q9NVA2 429 aaKnown RBP12.68□□□□□ -0.38
SPTB-208ENST00000556626 GTF2A1P52655 376 aaPredicted RBP12.68□□□□□ -0.38
SPTB-208ENST00000556626 STAMBPO95630 424 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms