RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 NUTM1Q86Y26 1132 aa9.12□□□□□ -0.95
CPSF2-205ENST00000556622 CARMIL2Q6F5E8 1435 aa9.12□□□□□ -0.95
CPSF2-205ENST00000556622 SOBPA7XYQ1 873 aa9.11□□□□□ -0.95
CPSF2-205ENST00000556622 PTCRAQ6ISU1 281 aaPredicted RBP9.11□□□□□ -0.95
CPSF2-205ENST00000556622 WASF2Q9Y6W5 498 aa9.11□□□□□ -0.95
CPSF2-205ENST00000556622 PRKCSHP14314 528 aaPredicted RBP9.1□□□□□ -0.95
CPSF2-205ENST00000556622 RANGAP1P46060 587 aaPredicted RBP9.1□□□□□ -0.95
CPSF2-205ENST00000556622 KCNMA1Q12791 1236 aa9.1□□□□□ -0.95
CPSF2-205ENST00000556622 TUSC1Q2TAM9 212 aa9.1□□□□□ -0.95
CPSF2-205ENST00000556622 EHBP1Q8NDI1 1231 aa9.1□□□□□ -0.95
CPSF2-205ENST00000556622 TBC1D2Q9BYX2 928 aa9.1□□□□□ -0.95
CPSF2-205ENST00000556622 GPBP1L1Q9HC44 474 aaPredicted RBP9.1□□□□□ -0.95
CPSF2-205ENST00000556622 PTPRGP23470 1445 aa9.1□□□□□ -0.95
CPSF2-205ENST00000556622 UBTFP17480 764 aaKnown RBP9.09□□□□□ -0.95
CPSF2-205ENST00000556622 PRXQ9BXM0 1461 aa9.08□□□□□ -0.96
CPSF2-205ENST00000556622 CEP162Q5TB80 1403 aa9.08□□□□□ -0.96
CPSF2-205ENST00000556622 SPTLC1O15269 473 aa9.08□□□□□ -0.96
CPSF2-205ENST00000556622 BRPF1P55201 1214 aaPredicted RBP9.08□□□□□ -0.96
CPSF2-205ENST00000556622 CCER1Q8TC90 406 aaPredicted RBP9.08□□□□□ -0.96
CPSF2-205ENST00000556622 DDRGK1Q96HY6 314 aa9.08□□□□□ -0.96
CPSF2-205ENST00000556622 IQGAP2Q13576 1575 aa9.07□□□□□ -0.96
CPSF2-205ENST00000556622 MOXD2PA6NHM9 499 aa9.07□□□□□ -0.96
CPSF2-205ENST00000556622 VSIG8P0DPA2 414 aa9.07□□□□□ -0.96
CPSF2-205ENST00000556622 GUCA2AQ02747 115 aa9.07□□□□□ -0.96
CPSF2-205ENST00000556622 PPARGC1BQ86YN6 1023 aaKnown RBP9.07□□□□□ -0.96
CPSF2-205ENST00000556622 PCDHGC3Q9UN70 934 aa9.07□□□□□ -0.96
CPSF2-205ENST00000556622 JUNDP17535 347 aa9.06□□□□□ -0.96
CPSF2-205ENST00000556622 RSBN1LQ6PCB5 846 aaPredicted RBP9.06□□□□□ -0.96
CPSF2-205ENST00000556622 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
CPSF2-205ENST00000556622 FAM117AQ9C073 453 aa9.06□□□□□ -0.96
CPSF2-205ENST00000556622 RSPH6AQ9H0K4 717 aa9.06□□□□□ -0.96
CPSF2-205ENST00000556622 TLL2Q9Y6L7 1015 aa9.06□□□□□ -0.96
CPSF2-205ENST00000556622 KIF21BO75037 1637 aa9.05□□□□□ -0.96
CPSF2-205ENST00000556622 PLEKHG3A1L390 1219 aa9.05□□□□□ -0.96
CPSF2-205ENST00000556622 FDX1P10109 184 aa9.05□□□□□ -0.96
CPSF2-205ENST00000556622 MYSM1Q5VVJ2 828 aa9.05□□□□□ -0.96
CPSF2-205ENST00000556622 PURBQ96QR8 312 aaKnown RBP9.05□□□□□ -0.96
CPSF2-205ENST00000556622 NDUFV2P19404 249 aa9.04□□□□□ -0.96
CPSF2-205ENST00000556622 SH3BP2P78314 561 aa9.04□□□□□ -0.96
CPSF2-205ENST00000556622 GOPCQ9HD26 462 aa9.04□□□□□ -0.96
CPSF2-205ENST00000556622 FAM69CQ0P6D2 419 aa9.03□□□□□ -0.96
CPSF2-205ENST00000556622 MRPL14Q6P1L8 145 aaKnown RBP9.03□□□□□ -0.96
CPSF2-205ENST00000556622 RIC3Q7Z5B4 369 aa9.03□□□□□ -0.96
CPSF2-205ENST00000556622 DISP1Q96F81 1524 aa9.02□□□□□ -0.97
CPSF2-205ENST00000556622 UGGT2Q9NYU1 1516 aa9.02□□□□□ -0.97
CPSF2-205ENST00000556622 SKIV2LQ15477 1246 aaKnown RBP9.02□□□□□ -0.97
CPSF2-205ENST00000556622 NEUROD2Q15784 382 aa9.02□□□□□ -0.97
CPSF2-205ENST00000556622 PRPF38BQ5VTL8 546 aaKnown RBP9.02□□□□□ -0.97
CPSF2-205ENST00000556622 NUDT12Q9BQG2 462 aa9.02□□□□□ -0.97
CPSF2-205ENST00000556622 SPDYE5A6NIY4 337 aa9.01□□□□□ -0.97
CPSF2-205ENST00000556622 SH3D19Q5HYK7 790 aa9.01□□□□□ -0.97
CPSF2-205ENST00000556622 RETREG3Q86VR2 466 aa9.01□□□□□ -0.97
CPSF2-205ENST00000556622 TMEM151AQ8N4L1 468 aa9.01□□□□□ -0.97
CPSF2-205ENST00000556622 UACAQ9BZF9 1416 aa9.01□□□□□ -0.97
CPSF2-205ENST00000556622 CTTNBP2Q8WZ74 1663 aa9□□□□□ -0.97
CPSF2-205ENST00000556622 GDF11O95390 407 aa9□□□□□ -0.97
CPSF2-205ENST00000556622 CENPBP07199 599 aaPredicted RBP9□□□□□ -0.97
CPSF2-205ENST00000556622 RASSF7Q02833 373 aa9□□□□□ -0.97
CPSF2-205ENST00000556622 TIMP2P16035 220 aa8.99□□□□□ -0.97
CPSF2-205ENST00000556622 NNTQ13423 1086 aa8.99□□□□□ -0.97
CPSF2-205ENST00000556622 DESI1Q6ICB0 168 aa8.99□□□□□ -0.97
CPSF2-205ENST00000556622 LIMD1Q9UGP4 676 aa8.99□□□□□ -0.97
CPSF2-205ENST00000556622 PCDHB15Q9Y5E8 787 aa8.99□□□□□ -0.97
CPSF2-205ENST00000556622 ARID3CA6NKF2 412 aa8.98□□□□□ -0.97
CPSF2-205ENST00000556622 LILRB3O75022 631 aa8.98□□□□□ -0.97
CPSF2-205ENST00000556622 MTMR2Q13614 643 aa8.98□□□□□ -0.97
CPSF2-205ENST00000556622 LINC01559Q495D7 138 aa8.98□□□□□ -0.97
CPSF2-205ENST00000556622 CLSPNQ9HAW4 1339 aa8.98□□□□□ -0.97
CPSF2-205ENST00000556622 ADCY10Q96PN6 1610 aa8.98□□□□□ -0.97
CPSF2-205ENST00000556622 SCARF1Q14162 830 aa8.97□□□□□ -0.97
CPSF2-205ENST00000556622 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.97□□□□□ -0.97
CPSF2-205ENST00000556622 KIAA0556O60303 1618 aa8.97□□□□□ -0.97
CPSF2-205ENST00000556622 CLIP1P30622 1438 aa8.97□□□□□ -0.97
CPSF2-205ENST00000556622 CLK2P49760 499 aaKnown RBP8.96□□□□□ -0.98
CPSF2-205ENST00000556622 WDR4P57081 412 aaKnown RBP8.96□□□□□ -0.98
CPSF2-205ENST00000556622 KRT76Q01546 638 aa8.96□□□□□ -0.98
CPSF2-205ENST00000556622 ZBTB3Q9H5J0 574 aa8.96□□□□□ -0.98
CPSF2-205ENST00000556622 ATP1B4Q9UN42 357 aaPredicted RBP8.96□□□□□ -0.98
CPSF2-205ENST00000556622 VPS8Q8N3P4 1428 aa8.96□□□□□ -0.98
CPSF2-205ENST00000556622 ABCC2Q92887 1545 aa8.95□□□□□ -0.98
CPSF2-205ENST00000556622 C6orf229H3BNL8 230 aa8.95□□□□□ -0.98
CPSF2-205ENST00000556622 PPFIA3O75145 1194 aa8.95□□□□□ -0.98
CPSF2-205ENST00000556622 UHRF1BP1LA0JNW5 1464 aa8.95□□□□□ -0.98
CPSF2-205ENST00000556622 PPP2R2DQ66LE6 453 aa8.94□□□□□ -0.98
CPSF2-205ENST00000556622 BAP1Q92560 729 aa8.94□□□□□ -0.98
CPSF2-205ENST00000556622 KLF16Q9BXK1 252 aaPredicted RBP8.94□□□□□ -0.98
CPSF2-205ENST00000556622 UNC93B1Q9H1C4 597 aa8.94□□□□□ -0.98
CPSF2-205ENST00000556622 PLB1Q6P1J6 1458 aa8.94□□□□□ -0.98
CPSF2-205ENST00000556622 ADH1CP00326 375 aa8.93□□□□□ -0.98
CPSF2-205ENST00000556622 QPCTQ16769 361 aa8.93□□□□□ -0.98
CPSF2-205ENST00000556622 IL27Q8NEV9 243 aa8.93□□□□□ -0.98
CPSF2-205ENST00000556622 POLR3EQ9NVU0 708 aa8.93□□□□□ -0.98
CPSF2-205ENST00000556622 ADAMTS8Q9UP79 889 aa8.93□□□□□ -0.98
CPSF2-205ENST00000556622 ASXL2Q76L83 1435 aa8.93□□□□□ -0.98
CPSF2-205ENST00000556622 ABCC10Q5T3U5 1492 aa8.93□□□□□ -0.98
CPSF2-205ENST00000556622 MAPKBP1O60336 1514 aa8.92□□□□□ -0.98
CPSF2-205ENST00000556622 MAN1A2O60476 641 aa8.92□□□□□ -0.98
CPSF2-205ENST00000556622 CCNYL3P0C7X3 344 aa8.92□□□□□ -0.98
CPSF2-205ENST00000556622 C6orf118Q5T5N4 469 aa8.92□□□□□ -0.98
CPSF2-205ENST00000556622 GPR161Q8N6U8 529 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms