RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 SLIT2O94813 1529 aa15.18■□□□□ 0.02
FOXN3-212ENST00000556541 PLEKHG2Q9H7P9 1386 aa15.17■□□□□ 0.02
FOXN3-212ENST00000556541 HOXC9P31274 260 aa15.17■□□□□ 0.02
FOXN3-212ENST00000556541 HAP1P54257 671 aaPredicted RBP15.17■□□□□ 0.02
FOXN3-212ENST00000556541 RRS1Q15050 365 aaKnown RBP15.17■□□□□ 0.02
FOXN3-212ENST00000556541 CFAP53Q96M91 514 aa15.17■□□□□ 0.02
FOXN3-212ENST00000556541 EMILIN1Q9Y6C2 1016 aa15.17■□□□□ 0.02
FOXN3-212ENST00000556541 NCAPD2Q15021 1401 aa15.17■□□□□ 0.02
FOXN3-212ENST00000556541 AMPHP49418 695 aa15.16■□□□□ 0.02
FOXN3-212ENST00000556541 PRDM11Q9NQV5 511 aa15.16■□□□□ 0.02
FOXN3-212ENST00000556541 COL5A2P05997 1499 aaPredicted RBP15.15■□□□□ 0.02
FOXN3-212ENST00000556541 TNNT2P45379 298 aaPredicted RBP15.15■□□□□ 0.02
FOXN3-212ENST00000556541 RGS17Q9UGC6 210 aaPredicted RBP15.15■□□□□ 0.02
FOXN3-212ENST00000556541 ZC3H6P61129 1189 aaKnown RBP15.14■□□□□ 0.01
FOXN3-212ENST00000556541 ERBB3P21860 1342 aa15.14■□□□□ 0.01
FOXN3-212ENST00000556541 FAM83GA6ND36 823 aa15.13■□□□□ 0.01
FOXN3-212ENST00000556541 FBLN1P23142 703 aa15.13■□□□□ 0.01
FOXN3-212ENST00000556541 FNBP4Q8N3X1 1017 aaPredicted RBP15.13■□□□□ 0.01
FOXN3-212ENST00000556541 SOX12O15370 315 aa15.12■□□□□ 0.01
FOXN3-212ENST00000556541 MIER1Q8N108 512 aa15.12■□□□□ 0.01
FOXN3-212ENST00000556541 DIAPH1O60610 1272 aaKnown RBP15.11■□□□□ 0.01
FOXN3-212ENST00000556541 IL13P35225 146 aa15.11■□□□□ 0.01
FOXN3-212ENST00000556541 HSP90AB2PQ58FF8 381 aa15.11■□□□□ 0.01
FOXN3-212ENST00000556541 NUDCQ9Y266 331 aa15.1■□□□□ 0.01
FOXN3-212ENST00000556541 AXIN2Q9Y2T1 843 aa15.1■□□□□ 0.01
FOXN3-212ENST00000556541 RGPD2P0DJD1 1756 aa15.1■□□□□ 0.01
FOXN3-212ENST00000556541 WDR17Q8IZU2 1322 aa15.1■□□□□ 0.01
FOXN3-212ENST00000556541 WNK3Q9BYP7 1800 aa15.1■□□□□ 0.01
FOXN3-212ENST00000556541 KDRP35968 1356 aa15.1■□□□□ 0.01
FOXN3-212ENST00000556541 BCL9LQ86UU0 1499 aa15.09■□□□□ 0.01
FOXN3-212ENST00000556541 NUTM2BA6NNL0 878 aaPredicted RBP15.09■□□□□ 0.01
FOXN3-212ENST00000556541 NUTM2EB1AL46 878 aaPredicted RBP15.09■□□□□ 0.01
FOXN3-212ENST00000556541 CNGB1Q14028 1251 aaPredicted RBP15.09■□□□□ 0.01
FOXN3-212ENST00000556541 EIF4A2Q14240 407 aaKnown RBP15.09■□□□□ 0.01
FOXN3-212ENST00000556541 NUTM2AQ8IVF1 878 aaPredicted RBP15.09■□□□□ 0.01
FOXN3-212ENST00000556541 IGSF1Q8N6C5 1336 aa15.09■□□□□ 0.01
FOXN3-212ENST00000556541 CRB1P82279 1406 aa15.09■□□□□ 0.01
FOXN3-212ENST00000556541 PPM1GO15355 546 aaPredicted RBP15.08■□□□□ 0
FOXN3-212ENST00000556541 CHRNA2Q15822 529 aa15.08■□□□□ 0
FOXN3-212ENST00000556541 ANKRD24Q8TF21 1146 aa15.08■□□□□ 0
FOXN3-212ENST00000556541 MRS2Q9HD23 443 aa15.08■□□□□ 0
FOXN3-212ENST00000556541 ADAMTS2O95450 1211 aa15.07■□□□□ 0
FOXN3-212ENST00000556541 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
FOXN3-212ENST00000556541 BTG4Q9NY30 223 aa15.07■□□□□ 0
FOXN3-212ENST00000556541 UNC5CLQ8IV45 518 aa15.06■□□□□ 0
FOXN3-212ENST00000556541 CARD10Q9BWT7 1032 aa15.06■□□□□ 0
FOXN3-212ENST00000556541 PARP4Q9UKK3 1724 aaKnown RBP15.06■□□□□ 0
FOXN3-212ENST00000556541 CCDC184Q52MB2 194 aa15.05■□□□□ -0
FOXN3-212ENST00000556541 NGLY1Q96IV0 654 aa15.05■□□□□ -0
FOXN3-212ENST00000556541 ATRNO75882 1429 aa15.05■□□□□ -0
FOXN3-212ENST00000556541 PLEKHG5O94827 1062 aa15.04■□□□□ -0
FOXN3-212ENST00000556541 FCHSD2O94868 740 aa15.04■□□□□ -0
FOXN3-212ENST00000556541 VPS72Q15906 364 aa15.04■□□□□ -0
FOXN3-212ENST00000556541 MEX3CQ5U5Q3 659 aaKnown RBP15.04■□□□□ -0
FOXN3-212ENST00000556541 POTEAQ6S8J7 498 aa15.04■□□□□ -0
FOXN3-212ENST00000556541 EYA1Q99502 592 aa15.04■□□□□ -0
FOXN3-212ENST00000556541 PNNQ9H307 717 aaKnown RBP15.04■□□□□ -0
FOXN3-212ENST00000556541 THRAP3Q9Y2W1 955 aaKnown RBP15.04■□□□□ -0
FOXN3-212ENST00000556541 PKD1L3Q7Z443 1732 aa15.03■□□□□ -0
FOXN3-212ENST00000556541 WDR43Q15061 677 aaKnown RBP eCLIP15.03■□□□□ -0
FOXN3-212ENST00000556541 C8orf37Q96NL8 207 aa15.03■□□□□ -0
FOXN3-212ENST00000556541 AFF2P51816 1311 aa15.02■□□□□ -0
FOXN3-212ENST00000556541 ZBTB7CA1YPR0 619 aa15.02■□□□□ -0
FOXN3-212ENST00000556541 EVA1CP58658 441 aa15.02■□□□□ -0
FOXN3-212ENST00000556541 NBPF6Q5VWK0 638 aa15.02■□□□□ -0
FOXN3-212ENST00000556541 NBPF4Q96M43 638 aa15.02■□□□□ -0
FOXN3-212ENST00000556541 DISP2A7MBM2 1401 aa15.01□□□□□ -0.01
FOXN3-212ENST00000556541 SPATA31A1Q5TZJ5 1347 aa15.01□□□□□ -0.01
FOXN3-212ENST00000556541 SPATA31A5Q5VU36 1347 aa15.01□□□□□ -0.01
FOXN3-212ENST00000556541 SPATA31A7Q8IWB4 1347 aa15.01□□□□□ -0.01
FOXN3-212ENST00000556541 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
FOXN3-212ENST00000556541 CDCA7Q9BWT1 371 aaPredicted RBP15.01□□□□□ -0.01
FOXN3-212ENST00000556541 USP21Q9UK80 565 aa15.01□□□□□ -0.01
FOXN3-212ENST00000556541 CSB-PGBD3P0DP91 1061 aa15□□□□□ -0.01
FOXN3-212ENST00000556541 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
FOXN3-212ENST00000556541 LARP1Q6PKG0 1096 aaKnown RBP15□□□□□ -0.01
FOXN3-212ENST00000556541 BARGINQ6ZT62 677 aa15□□□□□ -0.01
FOXN3-212ENST00000556541 RSPH6AQ9H0K4 717 aa15□□□□□ -0.01
FOXN3-212ENST00000556541 THSD7AQ9UPZ6 1657 aa15□□□□□ -0.01
FOXN3-212ENST00000556541 GLI3P10071 1580 aa14.99□□□□□ -0.01
FOXN3-212ENST00000556541 U2AF1L5P0DN76 240 aaPredicted RBP14.99□□□□□ -0.01
FOXN3-212ENST00000556541 U2AF1Q01081 240 aaKnown RBP eCLIP14.99□□□□□ -0.012e-7■□□□□ 8.2
FOXN3-212ENST00000556541 TOM1L2Q6ZVM7 507 aa14.99□□□□□ -0.01
FOXN3-212ENST00000556541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.01
FOXN3-212ENST00000556541 TRPC5Q9UL62 973 aaPredicted RBP14.99□□□□□ -0.01
FOXN3-212ENST00000556541 OVOS2A0A0G2JMS6 1433 aa14.99□□□□□ -0.01
FOXN3-212ENST00000556541 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
FOXN3-212ENST00000556541 TCP11L2Q8N4U5 519 aa14.98□□□□□ -0.01
FOXN3-212ENST00000556541 NGEFQ8N5V2 710 aa14.98□□□□□ -0.01
FOXN3-212ENST00000556541 LTV1Q96GA3 475 aaPredicted RBP14.98□□□□□ -0.01
FOXN3-212ENST00000556541 NLRP2Q9NX02 1062 aa14.98□□□□□ -0.01
FOXN3-212ENST00000556541 ADAMTS8Q9UP79 889 aa14.98□□□□□ -0.01
FOXN3-212ENST00000556541 SULT6B1Q6IMI4 303 aa14.97□□□□□ -0.01
FOXN3-212ENST00000556541 PLEKHF1Q96S99 279 aa14.97□□□□□ -0.01
FOXN3-212ENST00000556541 STRN4Q9NRL3 753 aa14.97□□□□□ -0.01
FOXN3-212ENST00000556541 SHANK3Q9BYB0 1731 aa14.97□□□□□ -0.01
FOXN3-212ENST00000556541 ONECUT3O60422 494 aaPredicted RBP14.96□□□□□ -0.01
FOXN3-212ENST00000556541 RUNDC1Q96C34 613 aa14.96□□□□□ -0.01
FOXN3-212ENST00000556541 MEGF6O75095 1541 aa14.96□□□□□ -0.02
FOXN3-212ENST00000556541 AMOTQ4VCS5 1084 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms