RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 FCHSD2O94868 740 aa6.92□□□□□ -1.3
GPHN-213ENST00000556501 RGS3P49796 1198 aa6.92□□□□□ -1.3
GPHN-213ENST00000556501 MLECQ14165 292 aa6.92□□□□□ -1.3
GPHN-213ENST00000556501 ZKSCAN2Q63HK3 967 aa6.92□□□□□ -1.3
GPHN-213ENST00000556501 WAPLQ7Z5K2 1190 aa6.92□□□□□ -1.3
GPHN-213ENST00000556501 TNNQ9UQP3 1299 aa6.92□□□□□ -1.3
GPHN-213ENST00000556501 XRN1Q8IZH2 1706 aaKnown RBP6.92□□□□□ -1.3
GPHN-213ENST00000556501 TRHP20396 242 aaPredicted RBP6.91□□□□□ -1.3
GPHN-213ENST00000556501 HDGFP51858 240 aaKnown RBP6.91□□□□□ -1.3
GPHN-213ENST00000556501 EXOSC9Q06265 439 aaKnown RBP6.91□□□□□ -1.3
GPHN-213ENST00000556501 POLA2Q14181 598 aa6.91□□□□□ -1.3
GPHN-213ENST00000556501 MVPQ14764 893 aaKnown RBP6.91□□□□□ -1.3
GPHN-213ENST00000556501 SPRYD3Q8NCJ5 442 aa6.91□□□□□ -1.3
GPHN-213ENST00000556501 TSR2Q969E8 191 aaKnown RBP6.91□□□□□ -1.3
GPHN-213ENST00000556501 BCL2L13Q9BXK5 485 aa6.91□□□□□ -1.3
GPHN-213ENST00000556501 RSPH6AQ9H0K4 717 aa6.91□□□□□ -1.3
GPHN-213ENST00000556501 ESF1Q9H501 851 aaKnown RBP6.91□□□□□ -1.3
GPHN-213ENST00000556501 POLKQ9UBT6 870 aa6.91□□□□□ -1.3
GPHN-213ENST00000556501 KIF16BQ96L93 1317 aa6.91□□□□□ -1.3
GPHN-213ENST00000556501 ROBO2Q9HCK4 1378 aa6.91□□□□□ -1.3
GPHN-213ENST00000556501 OVOS2A0A0J9YW53 1432 aa6.91□□□□□ -1.3
GPHN-213ENST00000556501 OVOS2Q6IE36 1432 aa6.91□□□□□ -1.3
GPHN-213ENST00000556501 USP54Q70EL1 1684 aa6.9□□□□□ -1.3
GPHN-213ENST00000556501 PEAK1Q9H792 1746 aa6.9□□□□□ -1.3
GPHN-213ENST00000556501 ABCB7O75027 752 aa6.9□□□□□ -1.3
GPHN-213ENST00000556501 RIPK4P57078 832 aa6.9□□□□□ -1.3
GPHN-213ENST00000556501 NFE2L2Q16236 605 aa6.9□□□□□ -1.3
GPHN-213ENST00000556501 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.9□□□□□ -1.3
GPHN-213ENST00000556501 DZIP1LQ8IYY4 767 aaKnown RBP6.9□□□□□ -1.3
GPHN-213ENST00000556501 NUDT16Q96DE0 195 aaKnown RBP6.9□□□□□ -1.3
GPHN-213ENST00000556501 SMC4Q9NTJ3 1288 aa6.9□□□□□ -1.3
GPHN-213ENST00000556501 PCDHB15Q9Y5E8 787 aa6.9□□□□□ -1.3
GPHN-213ENST00000556501 PTCH1Q13635 1447 aa6.9□□□□□ -1.31
GPHN-213ENST00000556501 PPM1GO15355 546 aaPredicted RBP6.89□□□□□ -1.31
GPHN-213ENST00000556501 PRKAR2BP31323 418 aa6.89□□□□□ -1.31
GPHN-213ENST00000556501 NBR1Q14596 966 aa6.89□□□□□ -1.31
GPHN-213ENST00000556501 ALDH1L2Q3SY69 923 aa6.89□□□□□ -1.31
GPHN-213ENST00000556501 RTL5Q5HYW3 569 aaPredicted RBP6.89□□□□□ -1.31
GPHN-213ENST00000556501 TXNDC2Q86VQ3 553 aa6.89□□□□□ -1.31
GPHN-213ENST00000556501 NME9Q86XW9 330 aa6.89□□□□□ -1.31
GPHN-213ENST00000556501 FTSJ3Q8IY81 847 aaKnown RBP6.89□□□□□ -1.31
GPHN-213ENST00000556501 SSH1Q8WYL5 1049 aa6.89□□□□□ -1.31
GPHN-213ENST00000556501 ZNF428Q96B54 188 aa6.89□□□□□ -1.31
GPHN-213ENST00000556501 RWDD1Q9H446 243 aaPredicted RBP6.89□□□□□ -1.31
GPHN-213ENST00000556501 PRR36Q9H6K5 1346 aa6.89□□□□□ -1.31
GPHN-213ENST00000556501 PIK3R4Q99570 1358 aa6.89□□□□□ -1.31
GPHN-213ENST00000556501 USP6P35125 1406 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 PTPRUQ92729 1446 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 USP19O94966 1318 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 NEFMP07197 916 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 TRIM27P14373 513 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 IL13P35225 146 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 BRPF1P55201 1214 aaPredicted RBP6.88□□□□□ -1.31
GPHN-213ENST00000556501 CALD1Q05682 793 aaKnown RBP6.88□□□□□ -1.31
GPHN-213ENST00000556501 HDAC1Q13547 482 aaPredicted RBP6.88□□□□□ -1.31
GPHN-213ENST00000556501 ATF7IPQ6VMQ6 1270 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 USP35Q9P2H5 1018 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 DDX19BQ9UMR2 479 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 PDZRN3Q9UPQ7 1066 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 EMILIN1Q9Y6C2 1016 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 CCDC61Q9Y6R9 512 aa6.88□□□□□ -1.31
GPHN-213ENST00000556501 MARF1Q9Y4F3 1742 aaKnown RBP6.87□□□□□ -1.31
GPHN-213ENST00000556501 LRRC37A3O60309 1634 aa6.87□□□□□ -1.31
GPHN-213ENST00000556501 SSH2Q76I76 1423 aa6.87□□□□□ -1.31
GPHN-213ENST00000556501 RGL2O15211 777 aa6.87□□□□□ -1.31
GPHN-213ENST00000556501 IPO8O15397 1037 aaKnown RBP6.87□□□□□ -1.31
GPHN-213ENST00000556501 DEKP35659 375 aaKnown RBP6.87□□□□□ -1.31
GPHN-213ENST00000556501 COG3Q96JB2 828 aa6.87□□□□□ -1.31
GPHN-213ENST00000556501 ZNF692Q9BU19 519 aaPredicted RBP6.87□□□□□ -1.31
GPHN-213ENST00000556501 IFT57Q9NWB7 429 aa6.87□□□□□ -1.31
GPHN-213ENST00000556501 PIK3C2AO00443 1686 aa6.87□□□□□ -1.31
GPHN-213ENST00000556501 USP31Q70CQ4 1352 aa6.86□□□□□ -1.31
GPHN-213ENST00000556501 PLEKHG3A1L390 1219 aa6.86□□□□□ -1.31
GPHN-213ENST00000556501 ZNF853P0CG23 659 aa6.86□□□□□ -1.31
GPHN-213ENST00000556501 GNAI1P63096 354 aa6.86□□□□□ -1.31
GPHN-213ENST00000556501 LMOD3Q0VAK6 560 aa6.86□□□□□ -1.31
GPHN-213ENST00000556501 ITPRIPQ8IWB1 547 aa6.86□□□□□ -1.31
GPHN-213ENST00000556501 PHACTR3Q96KR7 559 aa6.86□□□□□ -1.31
GPHN-213ENST00000556501 ZRANB1Q9UGI0 708 aa6.86□□□□□ -1.31
GPHN-213ENST00000556501 LAS1LQ9Y4W2 734 aaKnown RBP6.86□□□□□ -1.31
GPHN-213ENST00000556501 ZNF142P52746 1687 aaPredicted RBP6.86□□□□□ -1.31
GPHN-213ENST00000556501 RGPD8O14715 1765 aaPredicted RBP6.85□□□□□ -1.31
GPHN-213ENST00000556501 TTC21BQ7Z4L5 1316 aa6.85□□□□□ -1.31
GPHN-213ENST00000556501 NCKAP5LQ9HCH0 1330 aa6.85□□□□□ -1.31
GPHN-213ENST00000556501 HMOX1P09601 288 aa6.85□□□□□ -1.31
GPHN-213ENST00000556501 FBLN1P23142 703 aa6.85□□□□□ -1.31
GPHN-213ENST00000556501 SMC5Q8IY18 1101 aa6.85□□□□□ -1.31
GPHN-213ENST00000556501 TMEM57Q8N5G2 664 aa6.85□□□□□ -1.31
GPHN-213ENST00000556501 ARHGAP45Q92619 1136 aa6.85□□□□□ -1.31
GPHN-213ENST00000556501 ZBTB40Q9NUA8 1239 aa6.85□□□□□ -1.31
GPHN-213ENST00000556501 NOB1Q9ULX3 412 aaKnown RBP6.85□□□□□ -1.31
GPHN-213ENST00000556501 CEP170BQ9Y4F5 1589 aaPredicted RBP6.85□□□□□ -1.31
GPHN-213ENST00000556501 ANKARQ7Z5J8 1434 aa6.84□□□□□ -1.31
GPHN-213ENST00000556501 ARHGEF10O15013 1369 aa6.84□□□□□ -1.31
GPHN-213ENST00000556501 ABCC4O15439 1325 aa6.84□□□□□ -1.31
GPHN-213ENST00000556501 ACEP12821 1306 aa6.84□□□□□ -1.31
GPHN-213ENST00000556501 TTC21AQ8NDW8 1320 aa6.84□□□□□ -1.31
GPHN-213ENST00000556501 LTKP29376 864 aa6.84□□□□□ -1.31
GPHN-213ENST00000556501 MRPL50Q8N5N7 158 aaKnown RBP6.84□□□□□ -1.31
GPHN-213ENST00000556501 DAXXQ9UER7 740 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms