RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 KCNG1Q9UIX4 513 aa8.09□□□□□ -1.11
TDP1-215ENST00000556498 ARID3CA6NKF2 412 aa8.08□□□□□ -1.12
TDP1-215ENST00000556498 F12P00748 615 aaPredicted RBP8.08□□□□□ -1.12
TDP1-215ENST00000556498 APPP05067 770 aa8.08□□□□□ -1.12
TDP1-215ENST00000556498 OS9Q13438 667 aaPredicted RBP8.08□□□□□ -1.12
TDP1-215ENST00000556498 IRF5Q13568 498 aa8.08□□□□□ -1.12
TDP1-215ENST00000556498 CCDC27Q2M243 656 aa8.08□□□□□ -1.12
TDP1-215ENST00000556498 HSP90AB4PQ58FF6 505 aa8.08□□□□□ -1.12
TDP1-215ENST00000556498 FAM43BQ6ZT52 329 aaPredicted RBP8.08□□□□□ -1.12
TDP1-215ENST00000556498 C1orf115Q9H7X2 142 aa8.08□□□□□ -1.12
TDP1-215ENST00000556498 PRDM9Q9NQV7 894 aa8.08□□□□□ -1.12
TDP1-215ENST00000556498 ZNF777Q9ULD5 760 aaPredicted RBP8.08□□□□□ -1.12
TDP1-215ENST00000556498 ZNF330Q9Y3S2 320 aaPredicted RBP8.08□□□□□ -1.12
TDP1-215ENST00000556498 NBPF20Q3BBV1 942 aa8.07□□□□□ -1.12
TDP1-215ENST00000556498 NKX2-3Q8TAU0 364 aa8.07□□□□□ -1.12
TDP1-215ENST00000556498 ZNF526Q8TF50 670 aaPredicted RBP8.07□□□□□ -1.12
TDP1-215ENST00000556498 SLC6A16Q9GZN6 736 aa8.07□□□□□ -1.12
TDP1-215ENST00000556498 EVA1BQ9NVM1 165 aa8.07□□□□□ -1.12
TDP1-215ENST00000556498 HDAC5Q9UQL6 1122 aa8.07□□□□□ -1.12
TDP1-215ENST00000556498 CCNYL3P0C7X3 344 aa8.06□□□□□ -1.12
TDP1-215ENST00000556498 NUDT12Q9BQG2 462 aa8.06□□□□□ -1.12
TDP1-215ENST00000556498 NOP58Q9Y2X3 529 aaKnown RBP8.06□□□□□ -1.12
TDP1-215ENST00000556498 MAP10Q9P2G4 905 aa8.05□□□□□ -1.12
TDP1-215ENST00000556498 PLEKHD1A6NEE1 506 aa8.04□□□□□ -1.12
TDP1-215ENST00000556498 TTC36A6NLP5 189 aa8.04□□□□□ -1.12
TDP1-215ENST00000556498 ITGBL1O95965 494 aaPredicted RBP8.04□□□□□ -1.12
TDP1-215ENST00000556498 CTHP32929 405 aa8.04□□□□□ -1.12
TDP1-215ENST00000556498 KCNC4Q03721 635 aa8.04□□□□□ -1.12
TDP1-215ENST00000556498 KCNH2Q12809 1159 aa8.04□□□□□ -1.12
TDP1-215ENST00000556498 WASHC4Q2M389 1173 aa8.04□□□□□ -1.12
TDP1-215ENST00000556498 NBPF11Q86T75 865 aa8.04□□□□□ -1.12
TDP1-215ENST00000556498 FAM177A1Q8N128 213 aaPredicted RBP8.04□□□□□ -1.12
TDP1-215ENST00000556498 PNMA1Q8ND90 353 aa8.04□□□□□ -1.12
TDP1-215ENST00000556498 MAP7D2Q96T17 732 aa8.04□□□□□ -1.12
TDP1-215ENST00000556498 WASHC2AQ641Q2 1341 aa8.03□□□□□ -1.12
TDP1-215ENST00000556498 S1PR4O95977 384 aa8.03□□□□□ -1.12
TDP1-215ENST00000556498 TNNT2P45379 298 aaPredicted RBP8.03□□□□□ -1.12
TDP1-215ENST00000556498 UTP14CQ5TAP6 766 aaKnown RBP8.03□□□□□ -1.12
TDP1-215ENST00000556498 CASC1Q6TDU7 716 aa8.03□□□□□ -1.12
TDP1-215ENST00000556498 SMAP1Q8IYB5 467 aaPredicted RBP8.03□□□□□ -1.12
TDP1-215ENST00000556498 FKBPLQ9UIM3 349 aa8.03□□□□□ -1.12
TDP1-215ENST00000556498 NBPF1Q3BBV0 1214 aa8.02□□□□□ -1.13
TDP1-215ENST00000556498 EXOC8Q8IYI6 725 aa8.02□□□□□ -1.13
TDP1-215ENST00000556498 PLSCR2Q9NRY7 297 aa8.02□□□□□ -1.13
TDP1-215ENST00000556498 POM121CA8CG34 1229 aa8.01□□□□□ -1.13
TDP1-215ENST00000556498 MMRN1Q13201 1228 aa8.01□□□□□ -1.13
TDP1-215ENST00000556498 CC2D1BQ5T0F9 858 aaKnown RBP8.01□□□□□ -1.13
TDP1-215ENST00000556498 PTCRAQ6ISU1 281 aaPredicted RBP8.01□□□□□ -1.13
TDP1-215ENST00000556498 ZC3H4Q9UPT8 1303 aaKnown RBP8.01□□□□□ -1.13
TDP1-215ENST00000556498 VAC14Q08AM6 782 aa8□□□□□ -1.13
TDP1-215ENST00000556498 CCDC24Q8N4L8 307 aa8□□□□□ -1.13
TDP1-215ENST00000556498 KCTD17Q8N5Z5 321 aa8□□□□□ -1.13
TDP1-215ENST00000556498 ARMC2Q8NEN0 867 aa8□□□□□ -1.13
TDP1-215ENST00000556498 TMEM51Q9NW97 253 aa7.99□□□□□ -1.13
TDP1-215ENST00000556498 TCERG1O14776 1098 aaKnown RBP7.98□□□□□ -1.13
TDP1-215ENST00000556498 RGS3P49796 1198 aa7.98□□□□□ -1.13
TDP1-215ENST00000556498 CCDC82Q8N4S0 544 aa7.98□□□□□ -1.13
TDP1-215ENST00000556498 ZNF830Q96NB3 372 aaPredicted RBP7.98□□□□□ -1.13
TDP1-215ENST00000556498 UNC93B1Q9H1C4 597 aa7.98□□□□□ -1.13
TDP1-215ENST00000556498 YY1AP1Q9H869 796 aa7.98□□□□□ -1.13
TDP1-215ENST00000556498 FCF1Q9Y324 198 aaKnown RBP7.98□□□□□ -1.13
TDP1-215ENST00000556498 ZBBXA8MT70 800 aa7.97□□□□□ -1.13
TDP1-215ENST00000556498 NRDCO43847 1150 aa7.97□□□□□ -1.13
TDP1-215ENST00000556498 FBXO45P0C2W1 286 aa7.97□□□□□ -1.13
TDP1-215ENST00000556498 SLC20A2Q08357 652 aa7.97□□□□□ -1.13
TDP1-215ENST00000556498 NR1H3Q13133 447 aa7.97□□□□□ -1.13
TDP1-215ENST00000556498 HDGFL1Q5TGJ6 251 aa7.97□□□□□ -1.13
TDP1-215ENST00000556498 PDXDC2PQ6P474 469 aa7.97□□□□□ -1.13
TDP1-215ENST00000556498 GPKOWQ92917 476 aaPredicted RBP eCLIP7.97□□□□□ -1.13
TDP1-215ENST00000556498 GLMNQ92990 594 aa7.97□□□□□ -1.13
TDP1-215ENST00000556498 CALR3Q96L12 384 aaKnown RBP7.97□□□□□ -1.13
TDP1-215ENST00000556498 ALG2Q9H553 416 aa7.97□□□□□ -1.13
TDP1-215ENST00000556498 GOLGA6L3A6NEY3 463 aa7.96□□□□□ -1.14
TDP1-215ENST00000556498 PPEF1O14829 653 aaPredicted RBP7.96□□□□□ -1.14
TDP1-215ENST00000556498 HSP90AB3PQ58FF7 597 aa7.96□□□□□ -1.14
TDP1-215ENST00000556498 NBPF14Q5TI25 921 aa7.96□□□□□ -1.14
TDP1-215ENST00000556498 ADAMTS19Q8TE59 1207 aa7.96□□□□□ -1.14
TDP1-215ENST00000556498 SERPINA10Q9UK55 444 aa7.96□□□□□ -1.14
TDP1-215ENST00000556498 GPSM3Q9Y4H4 160 aa7.96□□□□□ -1.14
TDP1-215ENST00000556498 RNF223E7ERA6 249 aa7.95□□□□□ -1.14
TDP1-215ENST00000556498 KIF20AO95235 890 aa7.95□□□□□ -1.14
TDP1-215ENST00000556498 TPM2P07951 284 aa7.95□□□□□ -1.14
TDP1-215ENST00000556498 SOX11P35716 441 aa7.95□□□□□ -1.14
TDP1-215ENST00000556498 GGCXP38435 758 aa7.95□□□□□ -1.14
TDP1-215ENST00000556498 RBM25P49756 843 aaKnown RBP7.95□□□□□ -1.14
TDP1-215ENST00000556498 MTERF4Q7Z6M4 381 aaKnown RBP7.95□□□□□ -1.14
TDP1-215ENST00000556498 TMTC2Q8N394 836 aa7.95□□□□□ -1.14
TDP1-215ENST00000556498 CALRP27797 417 aaKnown RBP7.94□□□□□ -1.14
TDP1-215ENST00000556498 EIF4G2P78344 907 aaKnown RBP eCLIP7.94□□□□□ -1.14
TDP1-215ENST00000556498 PTK2Q05397 1052 aa7.94□□□□□ -1.14
TDP1-215ENST00000556498 RALBP1Q15311 655 aa7.94□□□□□ -1.14
TDP1-215ENST00000556498 NBPF9Q3BBW0 867 aa7.94□□□□□ -1.14
TDP1-215ENST00000556498 PPP1R18Q6NYC8 613 aa7.94□□□□□ -1.14
TDP1-215ENST00000556498 ANKLE1Q8NAG6 615 aa7.94□□□□□ -1.14
TDP1-215ENST00000556498 CCDC97Q96F63 343 aaPredicted RBP7.94□□□□□ -1.14
TDP1-215ENST00000556498 OCSTAMPQ9BR26 566 aa7.94□□□□□ -1.14
TDP1-215ENST00000556498 CARD10Q9BWT7 1032 aa7.94□□□□□ -1.14
TDP1-215ENST00000556498 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.94□□□□□ -1.142e-9■■■■■ 223.6
TDP1-215ENST00000556498 BAP1Q92560 729 aa7.93□□□□□ -1.14
TDP1-215ENST00000556498 MYO15BQ96JP2 1530 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms