RNA–Protein interactions for RNA: ENST00000556371.1

ITGA7-216, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-216ENST00000556371 WDR63Q8IWG1 891 aa13.04□□□□□ -0.32
ITGA7-216ENST00000556371 PHACTR3Q96KR7 559 aa13.04□□□□□ -0.32
ITGA7-216ENST00000556371 USP54Q70EL1 1684 aa13.04□□□□□ -0.32
ITGA7-216ENST00000556371 PEAK1Q9H792 1746 aa13.04□□□□□ -0.32
ITGA7-216ENST00000556371 FLT4P35916 1363 aa13.04□□□□□ -0.32
ITGA7-216ENST00000556371 MARF1Q9Y4F3 1742 aaKnown RBP13.03□□□□□ -0.32
ITGA7-216ENST00000556371 E9PSI1 815 aa13.03□□□□□ -0.32
ITGA7-216ENST00000556371 PLEKHG5O94827 1062 aa13.03□□□□□ -0.32
ITGA7-216ENST00000556371 GCP02774 474 aa13.03□□□□□ -0.32
ITGA7-216ENST00000556371 NEFMP07197 916 aa13.03□□□□□ -0.32
ITGA7-216ENST00000556371 RCAN3Q9UKA8 241 aa13.03□□□□□ -0.32
ITGA7-216ENST00000556371 NPHP3Q7Z494 1330 aa13.03□□□□□ -0.32
ITGA7-216ENST00000556371 KIF24Q5T7B8 1368 aa13.03□□□□□ -0.32
ITGA7-216ENST00000556371 RIPK4P57078 832 aa13.02□□□□□ -0.33
ITGA7-216ENST00000556371 SULT6B1Q6IMI4 303 aa13.02□□□□□ -0.33
ITGA7-216ENST00000556371 IP6K1Q92551 441 aa13.02□□□□□ -0.33
ITGA7-216ENST00000556371 TRIM35Q9UPQ4 493 aa13.02□□□□□ -0.33
ITGA7-216ENST00000556371 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
ITGA7-216ENST00000556371 IRX6P78412 446 aaPredicted RBP13.01□□□□□ -0.33
ITGA7-216ENST00000556371 NFE2L2Q16236 605 aa13.01□□□□□ -0.33
ITGA7-216ENST00000556371 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
ITGA7-216ENST00000556371 USP19O94966 1318 aa13.01□□□□□ -0.33
ITGA7-216ENST00000556371 TRPM3Q9HCF6 1732 aaPredicted RBP13.01□□□□□ -0.33
ITGA7-216ENST00000556371 ZBTB7CA1YPR0 619 aa13□□□□□ -0.33
ITGA7-216ENST00000556371 ARHGEF25Q86VW2 580 aa13□□□□□ -0.33
ITGA7-216ENST00000556371 EYA1Q99502 592 aa13□□□□□ -0.33
ITGA7-216ENST00000556371 NFAT5O94916 1531 aa12.99□□□□□ -0.33
ITGA7-216ENST00000556371 SPATA31A3Q5VYP0 1347 aa12.99□□□□□ -0.33
ITGA7-216ENST00000556371 LTV1Q96GA3 475 aaPredicted RBP12.99□□□□□ -0.33
ITGA7-216ENST00000556371 SLIT3O75094 1523 aa12.98□□□□□ -0.33
ITGA7-216ENST00000556371 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
ITGA7-216ENST00000556371 ARHGEF10O15013 1369 aa12.98□□□□□ -0.33
ITGA7-216ENST00000556371 PXDNQ92626 1479 aa12.97□□□□□ -0.33
ITGA7-216ENST00000556371 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
ITGA7-216ENST00000556371 SOS2Q07890 1332 aaPredicted RBP12.96□□□□□ -0.33
ITGA7-216ENST00000556371 IL16Q14005 1332 aa12.96□□□□□ -0.33
ITGA7-216ENST00000556371 ZC3H6P61129 1189 aaKnown RBP12.96□□□□□ -0.33
ITGA7-216ENST00000556371 CABLES1Q8TDN4 633 aa12.96□□□□□ -0.33
ITGA7-216ENST00000556371 MYH16Q9H6N6 1097 aa12.96□□□□□ -0.33
ITGA7-216ENST00000556371 TNS3Q68CZ2 1445 aa12.96□□□□□ -0.34
ITGA7-216ENST00000556371 ALS2Q96Q42 1657 aa12.96□□□□□ -0.34
ITGA7-216ENST00000556371 RRP1P56182 461 aaKnown RBP12.95□□□□□ -0.34
ITGA7-216ENST00000556371 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
ITGA7-216ENST00000556371 RGPD1P0DJD0 1748 aa12.95□□□□□ -0.34
ITGA7-216ENST00000556371 MED1Q15648 1581 aaPredicted RBP12.94□□□□□ -0.34
ITGA7-216ENST00000556371 AXIN2Q9Y2T1 843 aa12.94□□□□□ -0.34
ITGA7-216ENST00000556371 LTBP4Q8N2S1 1624 aa12.94□□□□□ -0.34
ITGA7-216ENST00000556371 KDRP35968 1356 aa12.94□□□□□ -0.34
ITGA7-216ENST00000556371 LMOD3Q0VAK6 560 aa12.93□□□□□ -0.34
ITGA7-216ENST00000556371 NBPF6Q5VWK0 638 aa12.93□□□□□ -0.34
ITGA7-216ENST00000556371 NBPF4Q96M43 638 aa12.93□□□□□ -0.34
ITGA7-216ENST00000556371 CALD1Q05682 793 aaKnown RBP12.92□□□□□ -0.34
ITGA7-216ENST00000556371 MTHFSDQ2M296 383 aaKnown RBP12.92□□□□□ -0.34
ITGA7-216ENST00000556371 USHBP1Q8N6Y0 703 aa12.92□□□□□ -0.34
ITGA7-216ENST00000556371 ANKRD24Q8TF21 1146 aa12.92□□□□□ -0.34
ITGA7-216ENST00000556371 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
ITGA7-216ENST00000556371 LTN1O94822 1766 aa12.92□□□□□ -0.34
ITGA7-216ENST00000556371 TSR2Q969E8 191 aaKnown RBP12.91□□□□□ -0.34
ITGA7-216ENST00000556371 LRRC59Q96AG4 307 aaKnown RBP12.91□□□□□ -0.34
ITGA7-216ENST00000556371 FANCIQ9NVI1 1328 aa12.9□□□□□ -0.34
ITGA7-216ENST00000556371 FAM83GA6ND36 823 aa12.9□□□□□ -0.34
ITGA7-216ENST00000556371 PLIN1O60240 522 aa12.9□□□□□ -0.34
ITGA7-216ENST00000556371 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.34
ITGA7-216ENST00000556371 DCTN1Q14203 1278 aa12.9□□□□□ -0.34
ITGA7-216ENST00000556371 LAS1LQ9Y4W2 734 aaKnown RBP12.9□□□□□ -0.34
ITGA7-216ENST00000556371 PHRF1Q9P1Y6 1649 aaKnown RBP12.9□□□□□ -0.34
ITGA7-216ENST00000556371 BCAR3O75815 825 aa12.89□□□□□ -0.35
ITGA7-216ENST00000556371 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
ITGA7-216ENST00000556371 GNAI1P63096 354 aa12.89□□□□□ -0.35
ITGA7-216ENST00000556371 CHRNA2Q15822 529 aa12.89□□□□□ -0.35
ITGA7-216ENST00000556371 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
ITGA7-216ENST00000556371 PPP4R2Q9NY27 417 aa12.89□□□□□ -0.35
ITGA7-216ENST00000556371 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
ITGA7-216ENST00000556371 CPDO75976 1380 aa12.87□□□□□ -0.35
ITGA7-216ENST00000556371 KIAA0232Q92628 1395 aa12.87□□□□□ -0.35
ITGA7-216ENST00000556371 HTATSF1O43719 755 aaKnown RBP12.87□□□□□ -0.35
ITGA7-216ENST00000556371 RARSP54136 660 aaKnown RBP12.87□□□□□ -0.35
ITGA7-216ENST00000556371 AEBP2Q6ZN18 517 aaPredicted RBP12.87□□□□□ -0.35
ITGA7-216ENST00000556371 MCM10Q7L590 875 aa12.87□□□□□ -0.35
ITGA7-216ENST00000556371 CT47B1P0C2W7 299 aaPredicted RBP12.86□□□□□ -0.35
ITGA7-216ENST00000556371 HAP1P54257 671 aaPredicted RBP12.86□□□□□ -0.35
ITGA7-216ENST00000556371 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.86□□□□□ -0.35
ITGA7-216ENST00000556371 RTF1Q92541 710 aaKnown RBP12.86□□□□□ -0.35
ITGA7-216ENST00000556371 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
ITGA7-216ENST00000556371 NHSL1Q5SYE7 1610 aa12.85□□□□□ -0.35
ITGA7-216ENST00000556371 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
ITGA7-216ENST00000556371 EXOC6Q8TAG9 804 aa12.85□□□□□ -0.35
ITGA7-216ENST00000556371 MBIPQ9NS73 344 aa12.85□□□□□ -0.35
ITGA7-216ENST00000556371 NLRP2Q9NX02 1062 aa12.85□□□□□ -0.35
ITGA7-216ENST00000556371 ERBB3P21860 1342 aa12.85□□□□□ -0.35
ITGA7-216ENST00000556371 CHL1O00533 1208 aa12.84□□□□□ -0.35
ITGA7-216ENST00000556371 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
ITGA7-216ENST00000556371 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
ITGA7-216ENST00000556371 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
ITGA7-216ENST00000556371 PRDM11Q9NQV5 511 aa12.84□□□□□ -0.35
ITGA7-216ENST00000556371 CRYBG1Q9Y4K1 1723 aa12.84□□□□□ -0.35
ITGA7-216ENST00000556371 COL18A1P39060 1754 aa12.84□□□□□ -0.35
ITGA7-216ENST00000556371 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
ITGA7-216ENST00000556371 CRB1P82279 1406 aa12.83□□□□□ -0.36
ITGA7-216ENST00000556371 NCAPD2Q15021 1401 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms