RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 SLC52A1Q9NWF4 448 aa9.47□□□□□ -0.89
PCNX1-211ENST00000556272 ZNF330Q9Y3S2 320 aaPredicted RBP9.47□□□□□ -0.89
PCNX1-211ENST00000556272 KIF3BO15066 747 aa9.46□□□□□ -0.89
PCNX1-211ENST00000556272 GPR37O15354 613 aa9.46□□□□□ -0.89
PCNX1-211ENST00000556272 PAK3O75914 559 aaPredicted RBP9.46□□□□□ -0.89
PCNX1-211ENST00000556272 AAMPQ13685 434 aa9.46□□□□□ -0.89
PCNX1-211ENST00000556272 UGGT1Q9NYU2 1555 aa9.46□□□□□ -0.89
PCNX1-211ENST00000556272 CAMSAP1Q5T5Y3 1602 aa9.46□□□□□ -0.9
PCNX1-211ENST00000556272 RAPGEF3O95398 923 aa9.46□□□□□ -0.9
PCNX1-211ENST00000556272 SREK1Q8WXA9 508 aaKnown RBP9.46□□□□□ -0.9
PCNX1-211ENST00000556272 NUBP1P53384 320 aa9.45□□□□□ -0.9
PCNX1-211ENST00000556272 NSD2O96028 1365 aa9.45□□□□□ -0.9
PCNX1-211ENST00000556272 SALL2Q9Y467 1007 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-211ENST00000556272 ZMYM3Q14202 1370 aa9.45□□□□□ -0.9
PCNX1-211ENST00000556272 RTL5Q5HYW3 569 aaPredicted RBP9.45□□□□□ -0.9
PCNX1-211ENST00000556272 ABCC3O15438 1527 aa9.44□□□□□ -0.9
PCNX1-211ENST00000556272 PPME1Q9Y570 386 aa9.44□□□□□ -0.9
PCNX1-211ENST00000556272 IQSEC2Q5JU85 1478 aa9.44□□□□□ -0.9
PCNX1-211ENST00000556272 PPP1R1BQ9UD71 204 aaPredicted RBP9.44□□□□□ -0.9
PCNX1-211ENST00000556272 ARHGEF28Q8N1W1 1705 aaKnown RBP9.44□□□□□ -0.9
PCNX1-211ENST00000556272 ARHGAP31Q2M1Z3 1444 aa9.43□□□□□ -0.9
PCNX1-211ENST00000556272 ADGRF5Q8IZF2 1346 aa9.43□□□□□ -0.9
PCNX1-211ENST00000556272 CENPJQ9HC77 1338 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-211ENST00000556272 SOCS7O14512 581 aa9.43□□□□□ -0.9
PCNX1-211ENST00000556272 SUGT1Q9Y2Z0 365 aa9.43□□□□□ -0.9
PCNX1-211ENST00000556272 NOS1P29475 1434 aa9.43□□□□□ -0.9
PCNX1-211ENST00000556272 NPATQ14207 1427 aa9.43□□□□□ -0.9
PCNX1-211ENST00000556272 DIP2CQ9Y2E4 1556 aa9.43□□□□□ -0.9
PCNX1-211ENST00000556272 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-211ENST00000556272 DEKP35659 375 aaKnown RBP9.43□□□□□ -0.9
PCNX1-211ENST00000556272 EXOC8Q8IYI6 725 aa9.43□□□□□ -0.9
PCNX1-211ENST00000556272 PCMTD1Q96MG8 357 aaPredicted RBP9.43□□□□□ -0.9
PCNX1-211ENST00000556272 PDE3AQ14432 1141 aa9.42□□□□□ -0.9
PCNX1-211ENST00000556272 CFAP70Q5T0N1 1121 aa9.42□□□□□ -0.9
PCNX1-211ENST00000556272 CCDC102AQ96A19 550 aa9.42□□□□□ -0.9
PCNX1-211ENST00000556272 C14orf93Q9H972 538 aaKnown RBP9.42□□□□□ -0.9
PCNX1-211ENST00000556272 LMTK3Q96Q04 1460 aa9.42□□□□□ -0.9
PCNX1-211ENST00000556272 ZFYVE9O95405 1425 aa9.42□□□□□ -0.9
PCNX1-211ENST00000556272 CGNL1Q0VF96 1302 aa9.42□□□□□ -0.9
PCNX1-211ENST00000556272 PLIN1O60240 522 aa9.42□□□□□ -0.9
PCNX1-211ENST00000556272 PPP1R37O75864 691 aa9.42□□□□□ -0.9
PCNX1-211ENST00000556272 NCLP19338 710 aaKnown RBP9.42□□□□□ -0.9
PCNX1-211ENST00000556272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.42□□□□□ -0.98e-7■■■□□ 18.9
PCNX1-211ENST00000556272 TCF3P15923 654 aa9.42□□□□□ -0.9
PCNX1-211ENST00000556272 MICAL1Q8TDZ2 1067 aa9.42□□□□□ -0.9
PCNX1-211ENST00000556272 ADGRB2O60241 1585 aa9.41□□□□□ -0.9
PCNX1-211ENST00000556272 AMHR2Q16671 573 aa9.41□□□□□ -0.9
PCNX1-211ENST00000556272 ANO8Q9HCE9 1232 aaPredicted RBP9.41□□□□□ -0.9
PCNX1-211ENST00000556272 ANKRD26Q9UPS8 1709 aa9.41□□□□□ -0.9
PCNX1-211ENST00000556272 NEXMIFQ5QGS0 1516 aa9.41□□□□□ -0.9
PCNX1-211ENST00000556272 SENP3-EIF4A1A0A087X0R7 540 aa9.41□□□□□ -0.9
PCNX1-211ENST00000556272 FAM161AQ3B820 660 aa9.41□□□□□ -0.9
PCNX1-211ENST00000556272 NOM1Q5C9Z4 860 aaKnown RBP9.41□□□□□ -0.9
PCNX1-211ENST00000556272 CLTCQ00610 1675 aaKnown RBP9.4□□□□□ -0.9
PCNX1-211ENST00000556272 YEATS2Q9ULM3 1422 aa9.4□□□□□ -0.9
PCNX1-211ENST00000556272 DCAF8Q5TAQ9 597 aa9.4□□□□□ -0.9
PCNX1-211ENST00000556272 NSD3Q9BZ95 1437 aa9.4□□□□□ -0.9
PCNX1-211ENST00000556272 NAP1L5Q96NT1 182 aaPredicted RBP9.4□□□□□ -0.9
PCNX1-211ENST00000556272 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.9
PCNX1-211ENST00000556272 SIGLEC1Q9BZZ2 1709 aa9.39□□□□□ -0.91
PCNX1-211ENST00000556272 RAB11FIP3O75154 756 aa9.39□□□□□ -0.91
PCNX1-211ENST00000556272 C20orf194Q5TEA3 1177 aa9.39□□□□□ -0.91
PCNX1-211ENST00000556272 NCKAP5LQ9HCH0 1330 aa9.39□□□□□ -0.91
PCNX1-211ENST00000556272 MED14O60244 1454 aa9.39□□□□□ -0.91
PCNX1-211ENST00000556272 ANKRD36BQ8N2N9 1353 aa9.39□□□□□ -0.91
PCNX1-211ENST00000556272 WDR63Q8IWG1 891 aa9.38□□□□□ -0.91
PCNX1-211ENST00000556272 POM121CA8CG34 1229 aa9.38□□□□□ -0.91
PCNX1-211ENST00000556272 APAF1O14727 1248 aa9.38□□□□□ -0.91
PCNX1-211ENST00000556272 TBC1D12O60347 775 aa9.38□□□□□ -0.91
PCNX1-211ENST00000556272 RBM27Q9P2N5 1060 aaKnown RBP9.38□□□□□ -0.91
PCNX1-211ENST00000556272 TULP4Q9NRJ4 1543 aa9.38□□□□□ -0.91
PCNX1-211ENST00000556272 ZNF16P17020 682 aaPredicted RBP9.38□□□□□ -0.91
PCNX1-211ENST00000556272 FOSBP53539 338 aa9.38□□□□□ -0.91
PCNX1-211ENST00000556272 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
PCNX1-211ENST00000556272 RUNDC1Q96C34 613 aa9.38□□□□□ -0.91
PCNX1-211ENST00000556272 USTQ9Y2C2 406 aa9.38□□□□□ -0.91
PCNX1-211ENST00000556272 MAPK8IP3Q9UPT6 1336 aa9.37□□□□□ -0.91
PCNX1-211ENST00000556272 ARHGEF40Q8TER5 1519 aa9.37□□□□□ -0.91
PCNX1-211ENST00000556272 CT47B1P0C2W7 299 aaPredicted RBP9.37□□□□□ -0.91
PCNX1-211ENST00000556272 TPD52L2O43399 206 aaKnown RBP9.36□□□□□ -0.91
PCNX1-211ENST00000556272 WWC1Q8IX03 1113 aa9.36□□□□□ -0.91
PCNX1-211ENST00000556272 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
PCNX1-211ENST00000556272 C8orf34Q49A92 452 aa9.36□□□□□ -0.91
PCNX1-211ENST00000556272 CALR3Q96L12 384 aaKnown RBP9.36□□□□□ -0.91
PCNX1-211ENST00000556272 C8orf37Q96NL8 207 aa9.36□□□□□ -0.91
PCNX1-211ENST00000556272 MFRPQ9BY79 579 aa9.36□□□□□ -0.91
PCNX1-211ENST00000556272 EVC2Q86UK5 1308 aa9.36□□□□□ -0.91
PCNX1-211ENST00000556272 REREQ9P2R6 1566 aa9.35□□□□□ -0.91
PCNX1-211ENST00000556272 RFX1P22670 979 aa9.35□□□□□ -0.91
PCNX1-211ENST00000556272 DNAJC14Q6Y2X3 702 aaPredicted RBP9.35□□□□□ -0.91
PCNX1-211ENST00000556272 MORC1Q86VD1 984 aa9.35□□□□□ -0.91
PCNX1-211ENST00000556272 GLMNQ92990 594 aa9.35□□□□□ -0.91
PCNX1-211ENST00000556272 PBXIP1Q96AQ6 731 aa9.35□□□□□ -0.91
PCNX1-211ENST00000556272 SGSM3Q96HU1 749 aa9.35□□□□□ -0.91
PCNX1-211ENST00000556272 SNRKQ9NRH2 765 aa9.35□□□□□ -0.91
PCNX1-211ENST00000556272 PREX1Q8TCU6 1659 aa9.35□□□□□ -0.91
PCNX1-211ENST00000556272 CCDC146Q8IYE0 955 aa9.35□□□□□ -0.91
PCNX1-211ENST00000556272 SRPK2P78362 688 aaKnown RBP9.34□□□□□ -0.91
PCNX1-211ENST00000556272 PMFBP1Q8TBY8 1022 aa9.34□□□□□ -0.91
PCNX1-211ENST00000556272 TMEM131LA2VDJ0 1609 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms