RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 CROCC2H7BZ55 1655 aa17.75■□□□□ 0.43
SIX1-205ENST00000555955 ADCY5O95622 1261 aa17.75■□□□□ 0.43
SIX1-205ENST00000555955 NCBP1Q09161 790 aaKnown RBP17.75■□□□□ 0.43
SIX1-205ENST00000555955 FOXD4L5Q5VV16 416 aaPredicted RBP17.75■□□□□ 0.43
SIX1-205ENST00000555955 FOXD4L4Q8WXT5 416 aaPredicted RBP17.75■□□□□ 0.43
SIX1-205ENST00000555955 WDR63Q8IWG1 891 aa17.75■□□□□ 0.43
SIX1-205ENST00000555955 CHRM1P11229 460 aaPredicted RBP17.74■□□□□ 0.43
SIX1-205ENST00000555955 TRIM27P14373 513 aa17.74■□□□□ 0.43
SIX1-205ENST00000555955 TCP11L2Q8N4U5 519 aa17.74■□□□□ 0.43
SIX1-205ENST00000555955 LAMC1P11047 1609 aa17.74■□□□□ 0.43
SIX1-205ENST00000555955 TULP2O00295 520 aa17.74■□□□□ 0.43
SIX1-205ENST00000555955 CALCOCO1Q9P1Z2 691 aa17.74■□□□□ 0.43
SIX1-205ENST00000555955 UVSSAQ2YD98 709 aa17.73■□□□□ 0.43
SIX1-205ENST00000555955 KIAA1524Q8TCG1 905 aa17.73■□□□□ 0.43
SIX1-205ENST00000555955 SYAP1Q96A49 352 aaPredicted RBP17.73■□□□□ 0.43
SIX1-205ENST00000555955 FAM184AQ8NB25 1140 aa17.72■□□□□ 0.43
SIX1-205ENST00000555955 SMC4Q9NTJ3 1288 aa17.72■□□□□ 0.43
SIX1-205ENST00000555955 MORC2Q9Y6X9 1032 aaPredicted RBP17.72■□□□□ 0.43
SIX1-205ENST00000555955 ANKRD45Q5TZF3 282 aa17.71■□□□□ 0.43
SIX1-205ENST00000555955 RUNDC1Q96C34 613 aa17.71■□□□□ 0.43
SIX1-205ENST00000555955 MAP3K4Q9Y6R4 1608 aa17.71■□□□□ 0.43
SIX1-205ENST00000555955 ZBTB40Q9NUA8 1239 aa17.71■□□□□ 0.42
SIX1-205ENST00000555955 ARHGEF5Q12774 1597 aa17.71■□□□□ 0.42
SIX1-205ENST00000555955 A2MP01023 1474 aa17.7■□□□□ 0.42
SIX1-205ENST00000555955 SAMD9LQ8IVG5 1584 aa17.7■□□□□ 0.42
SIX1-205ENST00000555955 PHF14O94880 888 aa17.7■□□□□ 0.42
SIX1-205ENST00000555955 CFAP74Q9C0B2 1584 aa17.69■□□□□ 0.42
SIX1-205ENST00000555955 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
SIX1-205ENST00000555955 PYCARDQ9ULZ3 195 aa17.69■□□□□ 0.42
SIX1-205ENST00000555955 ATF7IPQ6VMQ6 1270 aa17.68■□□□□ 0.42
SIX1-205ENST00000555955 DIP2BQ9P265 1576 aa17.68■□□□□ 0.42
SIX1-205ENST00000555955 CDC45O75419 566 aa17.68■□□□□ 0.42
SIX1-205ENST00000555955 PLCB2Q00722 1185 aa17.68■□□□□ 0.42
SIX1-205ENST00000555955 KRT222Q8N1A0 295 aa17.68■□□□□ 0.42
SIX1-205ENST00000555955 TMEM57Q8N5G2 664 aa17.68■□□□□ 0.42
SIX1-205ENST00000555955 KIF18AQ8NI77 898 aa17.68■□□□□ 0.42
SIX1-205ENST00000555955 TSPYL1Q9H0U9 437 aa17.68■□□□□ 0.42
SIX1-205ENST00000555955 PLCH2O75038 1416 aa17.68■□□□□ 0.42
SIX1-205ENST00000555955 SYCP1Q15431 976 aa17.67■□□□□ 0.42
SIX1-205ENST00000555955 SYNMO15061 1565 aa17.66■□□□□ 0.42
SIX1-205ENST00000555955 ST18O60284 1047 aa17.66■□□□□ 0.42
SIX1-205ENST00000555955 BRD2P25440 801 aaKnown RBP17.66■□□□□ 0.42
SIX1-205ENST00000555955 NAA30Q147X3 362 aaPredicted RBP17.66■□□□□ 0.42
SIX1-205ENST00000555955 KCNF1Q9H3M0 494 aa17.65■□□□□ 0.42
SIX1-205ENST00000555955 HCLS1P14317 486 aaPredicted RBP17.64■□□□□ 0.41
SIX1-205ENST00000555955 MLECQ14165 292 aa17.64■□□□□ 0.41
SIX1-205ENST00000555955 SSH1Q8WYL5 1049 aa17.64■□□□□ 0.41
SIX1-205ENST00000555955 NOB1Q9ULX3 412 aaKnown RBP17.64■□□□□ 0.41
SIX1-205ENST00000555955 SHANK2Q9UPX8 1470 aa17.64■□□□□ 0.41
SIX1-205ENST00000555955 KANK1Q14678 1352 aa17.64■□□□□ 0.41
SIX1-205ENST00000555955 NPM1P06748 294 aaKnown RBP eCLIP17.64■□□□□ 0.41
SIX1-205ENST00000555955 ABCC1P33527 1531 aa17.64■□□□□ 0.41
SIX1-205ENST00000555955 KDM4AO75164 1064 aa17.63■□□□□ 0.41
SIX1-205ENST00000555955 TSR2Q969E8 191 aaKnown RBP17.63■□□□□ 0.41
SIX1-205ENST00000555955 MAST1Q9Y2H9 1570 aa17.63■□□□□ 0.41
SIX1-205ENST00000555955 POLR3AO14802 1390 aaPredicted RBP17.63■□□□□ 0.41
SIX1-205ENST00000555955 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
SIX1-205ENST00000555955 FEZ2Q9UHY8 353 aaPredicted RBP17.63■□□□□ 0.41
SIX1-205ENST00000555955 ANKRD36BQ8N2N9 1353 aa17.62■□□□□ 0.41
SIX1-205ENST00000555955 KIF13AQ9H1H9 1805 aa17.62■□□□□ 0.41
SIX1-205ENST00000555955 ARHGAP5Q13017 1502 aa17.62■□□□□ 0.41
SIX1-205ENST00000555955 EIF2AK4Q9P2K8 1649 aaKnown RBP17.62■□□□□ 0.41
SIX1-205ENST00000555955 CYB5RLQ6IPT4 315 aa17.62■□□□□ 0.41
SIX1-205ENST00000555955 USP26Q9BXU7 913 aa17.62■□□□□ 0.41
SIX1-205ENST00000555955 CCDC27Q2M243 656 aa17.62■□□□□ 0.41
SIX1-205ENST00000555955 TPRNQ4KMQ1 711 aa17.62■□□□□ 0.41
SIX1-205ENST00000555955 GADD45BO75293 160 aaPredicted RBP17.61■□□□□ 0.41
SIX1-205ENST00000555955 TPM3P06753 285 aa17.61■□□□□ 0.41
SIX1-205ENST00000555955 TNNT3P45378 269 aaPredicted RBP17.61■□□□□ 0.41
SIX1-205ENST00000555955 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
SIX1-205ENST00000555955 FOXD4L6Q3SYB3 417 aaPredicted RBP17.61■□□□□ 0.41
SIX1-205ENST00000555955 FOXD4L3Q6VB84 417 aaPredicted RBP17.61■□□□□ 0.41
SIX1-205ENST00000555955 SLC52A1Q9NWF4 448 aa17.61■□□□□ 0.41
SIX1-205ENST00000555955 SMTNL1A8MU46 457 aa17.61■□□□□ 0.41
SIX1-205ENST00000555955 CT47B1P0C2W7 299 aaPredicted RBP17.61■□□□□ 0.41
SIX1-205ENST00000555955 SPC24Q8NBT2 197 aa17.61■□□□□ 0.41
SIX1-205ENST00000555955 TSPY4P0CV99 314 aa17.6■□□□□ 0.41
SIX1-205ENST00000555955 TSPY10P0CW01 314 aa17.6■□□□□ 0.41
SIX1-205ENST00000555955 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
SIX1-205ENST00000555955 TMX1Q9H3N1 280 aa17.6■□□□□ 0.41
SIX1-205ENST00000555955 GDPD2Q9HCC8 539 aa17.6■□□□□ 0.41
SIX1-205ENST00000555955 C9orf84Q5VXU9 1444 aa17.6■□□□□ 0.41
SIX1-205ENST00000555955 ST7Q9NRC1 585 aa17.6■□□□□ 0.41
SIX1-205ENST00000555955 RNF216Q9NWF9 866 aaPredicted RBP17.6■□□□□ 0.41
SIX1-205ENST00000555955 HNRNPH2P55795 449 aaKnown RBP17.59■□□□□ 0.41
SIX1-205ENST00000555955 C16orf45Q96MC5 204 aaPredicted RBP17.59■□□□□ 0.41
SIX1-205ENST00000555955 PPRC1Q5VV67 1664 aaKnown RBP17.59■□□□□ 0.41
SIX1-205ENST00000555955 SOX12O15370 315 aa17.59■□□□□ 0.41
SIX1-205ENST00000555955 BRD1O95696 1058 aa17.58■□□□□ 0.41
SIX1-205ENST00000555955 IQSEC2Q5JU85 1478 aa17.58■□□□□ 0.41
SIX1-205ENST00000555955 CCDC112Q8NEF3 446 aa17.58■□□□□ 0.4
SIX1-205ENST00000555955 CARD14Q9BXL6 1004 aa17.57■□□□□ 0.4
SIX1-205ENST00000555955 GOLGA6L6A8MZA4 724 aa17.57■□□□□ 0.4
SIX1-205ENST00000555955 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
SIX1-205ENST00000555955 GSPT1P15170 499 aaKnown RBP17.57■□□□□ 0.4
SIX1-205ENST00000555955 FAM193AP78312 1265 aa17.57■□□□□ 0.4
SIX1-205ENST00000555955 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
SIX1-205ENST00000555955 SMARCA5O60264 1052 aaPredicted RBP17.57■□□□□ 0.4
SIX1-205ENST00000555955 KMT5BQ4FZB7 885 aa17.57■□□□□ 0.4
SIX1-205ENST00000555955 EFCC1Q9HA90 598 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms