RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 ADGRB1O14514 1584 aa9.56□□□□□ -0.88
CHD8-209ENST00000555935 ADGRB3O60242 1522 aa9.56□□□□□ -0.88
CHD8-209ENST00000555935 UGGT1Q9NYU2 1555 aa9.55□□□□□ -0.88
CHD8-209ENST00000555935 U2SURPO15042 1029 aaKnown RBP9.55□□□□□ -0.88
CHD8-209ENST00000555935 ST18O60284 1047 aa9.55□□□□□ -0.88
CHD8-209ENST00000555935 PODXL2Q9NZ53 605 aa9.55□□□□□ -0.88
CHD8-209ENST00000555935 TRAK1Q9UPV9 953 aa9.55□□□□□ -0.88
CHD8-209ENST00000555935 EVC2Q86UK5 1308 aa9.55□□□□□ -0.88
CHD8-209ENST00000555935 GPT2Q8TD30 523 aa9.55□□□□□ -0.88
CHD8-209ENST00000555935 EFCAB6Q5THR3 1501 aa9.55□□□□□ -0.88
CHD8-209ENST00000555935 PRPF40AO75400 957 aaKnown RBP9.54□□□□□ -0.88
CHD8-209ENST00000555935 KIAA2012Q0VF49 1180 aa9.54□□□□□ -0.88
CHD8-209ENST00000555935 INTS3Q68E01 1043 aaKnown RBP9.54□□□□□ -0.88
CHD8-209ENST00000555935 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
CHD8-209ENST00000555935 USP26Q9BXU7 913 aa9.54□□□□□ -0.88
CHD8-209ENST00000555935 MROH2AA6NES4 1674 aa9.54□□□□□ -0.88
CHD8-209ENST00000555935 ATP7AQ04656 1500 aa9.53□□□□□ -0.88
CHD8-209ENST00000555935 GSPT1P15170 499 aaKnown RBP9.53□□□□□ -0.88
CHD8-209ENST00000555935 MYRIPQ8NFW9 859 aa9.53□□□□□ -0.88
CHD8-209ENST00000555935 KIF24Q5T7B8 1368 aa9.53□□□□□ -0.88
CHD8-209ENST00000555935 ABCC4O15439 1325 aa9.53□□□□□ -0.88
CHD8-209ENST00000555935 HMGN5P82970 282 aaKnown RBP9.53□□□□□ -0.88
CHD8-209ENST00000555935 TTC22Q5TAA0 569 aa9.53□□□□□ -0.88
CHD8-209ENST00000555935 CASC1Q6TDU7 716 aa9.53□□□□□ -0.88
CHD8-209ENST00000555935 TMEM63CQ9P1W3 806 aa9.53□□□□□ -0.88
CHD8-209ENST00000555935 MROH1Q8NDA8 1641 aa9.53□□□□□ -0.88
CHD8-209ENST00000555935 KIF3BO15066 747 aa9.52□□□□□ -0.88
CHD8-209ENST00000555935 DMTNQ08495 405 aa9.52□□□□□ -0.88
CHD8-209ENST00000555935 PLEKHM2Q8IWE5 1019 aa9.52□□□□□ -0.88
CHD8-209ENST00000555935 SIRT2Q8IXJ6 389 aa9.52□□□□□ -0.88
CHD8-209ENST00000555935 AFAP1Q8N556 730 aa9.52□□□□□ -0.88
CHD8-209ENST00000555935 MRPL50Q8N5N7 158 aaKnown RBP9.52□□□□□ -0.88
CHD8-209ENST00000555935 SYAP1Q96A49 352 aaPredicted RBP9.52□□□□□ -0.88
CHD8-209ENST00000555935 RBM27Q9P2N5 1060 aaKnown RBP9.52□□□□□ -0.88
CHD8-209ENST00000555935 LMTK2Q8IWU2 1503 aa9.52□□□□□ -0.88
CHD8-209ENST00000555935 RPGRIP1LQ68CZ1 1315 aa9.52□□□□□ -0.89
CHD8-209ENST00000555935 SYCE3A1L190 88 aa9.52□□□□□ -0.89
CHD8-209ENST00000555935 PKP1Q13835 747 aa9.52□□□□□ -0.89
CHD8-209ENST00000555935 TULP4Q9NRJ4 1543 aa9.52□□□□□ -0.89
CHD8-209ENST00000555935 PTMAP06454 111 aaKnown RBP9.52□□□□□ -0.89
CHD8-209ENST00000555935 GTF2F1P35269 517 aaKnown RBP eCLIP9.52□□□□□ -0.89
CHD8-209ENST00000555935 ZDHHC9Q9Y397 364 aa9.52□□□□□ -0.89
CHD8-209ENST00000555935 PHF14O94880 888 aa9.51□□□□□ -0.89
CHD8-209ENST00000555935 TSPY26PQ9H489 355 aa9.51□□□□□ -0.89
CHD8-209ENST00000555935 DCTPP1Q9H773 170 aa9.51□□□□□ -0.89
CHD8-209ENST00000555935 C1orf115Q9H7X2 142 aa9.51□□□□□ -0.89
CHD8-209ENST00000555935 PNPLA6Q8IY17 1366 aa9.51□□□□□ -0.89
CHD8-209ENST00000555935 CDC42BPGQ6DT37 1551 aa9.51□□□□□ -0.89
CHD8-209ENST00000555935 DIAPH1O60610 1272 aaKnown RBP9.51□□□□□ -0.89
CHD8-209ENST00000555935 FCHSD2O94868 740 aa9.51□□□□□ -0.89
CHD8-209ENST00000555935 REC8O95072 547 aa9.51□□□□□ -0.89
CHD8-209ENST00000555935 API5Q9BZZ5 524 aaKnown RBP9.51□□□□□ -0.89
CHD8-209ENST00000555935 VAMP4O75379 141 aa9.5□□□□□ -0.89
CHD8-209ENST00000555935 MCM2P49736 904 aa9.5□□□□□ -0.89
CHD8-209ENST00000555935 UVSSAQ2YD98 709 aa9.5□□□□□ -0.89
CHD8-209ENST00000555935 FAM184AQ8NB25 1140 aa9.5□□□□□ -0.89
CHD8-209ENST00000555935 ZGPATQ8N5A5 531 aaKnown RBP9.5□□□□□ -0.89
CHD8-209ENST00000555935 GTPBP4Q9BZE4 634 aaKnown RBP9.5□□□□□ -0.89
CHD8-209ENST00000555935 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHD8-209ENST00000555935 PPLO60437 1756 aa9.49□□□□□ -0.89
CHD8-209ENST00000555935 UHRF1BP1LA0JNW5 1464 aa9.49□□□□□ -0.89
CHD8-209ENST00000555935 ZFYVE9O95405 1425 aa9.49□□□□□ -0.89
CHD8-209ENST00000555935 PIBF1Q8WXW3 757 aa9.49□□□□□ -0.89
CHD8-209ENST00000555935 A0A1W2PP64 1363 aa9.49□□□□□ -0.89
CHD8-209ENST00000555935 ASXL2Q76L83 1435 aa9.49□□□□□ -0.89
CHD8-209ENST00000555935 ZSCAN20P17040 1043 aaPredicted RBP9.49□□□□□ -0.89
CHD8-209ENST00000555935 GNAI1P63096 354 aa9.49□□□□□ -0.89
CHD8-209ENST00000555935 ZCCHC11Q5TAX3 1644 aaKnown RBP9.49□□□□□ -0.89
CHD8-209ENST00000555935 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
CHD8-209ENST00000555935 BRD1O95696 1058 aa9.48□□□□□ -0.89
CHD8-209ENST00000555935 DNTTIP2Q5QJE6 756 aaKnown RBP9.48□□□□□ -0.89
CHD8-209ENST00000555935 IFT57Q9NWB7 429 aa9.48□□□□□ -0.89
CHD8-209ENST00000555935 GLI2P10070 1586 aa9.48□□□□□ -0.89
CHD8-209ENST00000555935 ANKRD26Q9UPS8 1709 aa9.48□□□□□ -0.89
CHD8-209ENST00000555935 TMEM132EQ6IEE7 984 aa9.48□□□□□ -0.89
CHD8-209ENST00000555935 KLHL34Q8N239 644 aa9.48□□□□□ -0.89
CHD8-209ENST00000555935 RNF214Q8ND24 703 aa9.48□□□□□ -0.89
CHD8-209ENST00000555935 KIF20AO95235 890 aa9.47□□□□□ -0.89
CHD8-209ENST00000555935 GGNBP2Q9H3C7 697 aa9.47□□□□□ -0.89
CHD8-209ENST00000555935 TERF2IPQ9NYB0 399 aa9.47□□□□□ -0.89
CHD8-209ENST00000555935 NSFL1CQ9UNZ2 370 aaKnown RBP9.47□□□□□ -0.89
CHD8-209ENST00000555935 AK9Q5TCS8 1911 aa9.47□□□□□ -0.89
CHD8-209ENST00000555935 LRRC7Q96NW7 1537 aa9.47□□□□□ -0.89
CHD8-209ENST00000555935 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
CHD8-209ENST00000555935 ERC2O15083 957 aa9.47□□□□□ -0.89
CHD8-209ENST00000555935 CHGAP10645 457 aaKnown RBP9.47□□□□□ -0.89
CHD8-209ENST00000555935 SDSP20132 328 aa9.47□□□□□ -0.89
CHD8-209ENST00000555935 INTS4Q96HW7 963 aaKnown RBP9.47□□□□□ -0.89
CHD8-209ENST00000555935 ARHGEF28Q8N1W1 1705 aaKnown RBP9.46□□□□□ -0.89
CHD8-209ENST00000555935 CUL4AQ13619 759 aa9.46□□□□□ -0.89
CHD8-209ENST00000555935 NOLC1Q14978 699 aaKnown RBP eCLIP9.46□□□□□ -0.89
CHD8-209ENST00000555935 NFE2L2Q16236 605 aa9.46□□□□□ -0.89
CHD8-209ENST00000555935 RPAP2Q8IXW5 612 aaPredicted RBP9.46□□□□□ -0.89
CHD8-209ENST00000555935 ANKRD44Q8N8A2 993 aa9.46□□□□□ -0.89
CHD8-209ENST00000555935 CABP2Q9NPB3 220 aa9.46□□□□□ -0.89
CHD8-209ENST00000555935 PRDM10Q9NQV6 1147 aa9.46□□□□□ -0.89
CHD8-209ENST00000555935 SPTLC3Q9NUV7 552 aa9.46□□□□□ -0.89
CHD8-209ENST00000555935 FYB1O15117 783 aa9.46□□□□□ -0.9
CHD8-209ENST00000555935 LETM1O95202 739 aaPredicted RBP9.46□□□□□ -0.9
CHD8-209ENST00000555935 ZNF710Q8N1W2 664 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms